RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 SLC22A23A1A5C7 686 aa12.37□□□□□ -0.43
PAF1-202ENST00000416728 TRAPPC13A5PLN9 417 aa12.37□□□□□ -0.43
PAF1-202ENST00000416728 ANGPT2O15123 496 aa12.37□□□□□ -0.43
PAF1-202ENST00000416728 DHHO43323 396 aa12.37□□□□□ -0.43
PAF1-202ENST00000416728 PPIHO43447 177 aaKnown RBP12.37□□□□□ -0.43
PAF1-202ENST00000416728 THY1P04216 161 aa12.37□□□□□ -0.43
PAF1-202ENST00000416728 MSMBP08118 114 aa12.37□□□□□ -0.43
PAF1-202ENST00000416728 VIMP08670 466 aaKnown RBP12.37□□□□□ -0.43
PAF1-202ENST00000416728 FAM157BP0CG42 384 aa12.37□□□□□ -0.43
PAF1-202ENST00000416728 UMPSP11172 480 aa12.37□□□□□ -0.43
PAF1-202ENST00000416728 TMEM53Q6P2H8 277 aa12.37□□□□□ -0.43
PAF1-202ENST00000416728 LRFN4Q6PJG9 635 aa12.37□□□□□ -0.43
PAF1-202ENST00000416728 NANOGNBQ7Z5D8 188 aa12.37□□□□□ -0.43
PAF1-202ENST00000416728 DPPA2Q7Z7J5 298 aa12.37□□□□□ -0.43
PAF1-202ENST00000416728 PATL1Q86TB9 770 aaKnown RBP12.37□□□□□ -0.43
PAF1-202ENST00000416728 RBM45Q8IUH3 476 aaKnown RBP12.37□□□□□ -0.43
PAF1-202ENST00000416728 SLC30A8Q8IWU4 369 aa12.37□□□□□ -0.43
PAF1-202ENST00000416728 DPP10Q8N608 796 aa12.37□□□□□ -0.43
PAF1-202ENST00000416728 LRRC17Q8N6Y2 441 aa12.37□□□□□ -0.43
PAF1-202ENST00000416728 OR4D11Q8NGI4 311 aa12.37□□□□□ -0.43
PAF1-202ENST00000416728 SLC26A7Q8TE54 656 aa12.37□□□□□ -0.43
PAF1-202ENST00000416728 YIPF5Q969M3 257 aa12.37□□□□□ -0.43
PAF1-202ENST00000416728 TMEM186Q96B77 213 aa12.37□□□□□ -0.43
PAF1-202ENST00000416728 MPP4Q96JB8 637 aa12.37□□□□□ -0.43
PAF1-202ENST00000416728 CGREF1Q99674 301 aa12.37□□□□□ -0.43
PAF1-202ENST00000416728 ZNF416Q9BWM5 594 aa12.37□□□□□ -0.43
PAF1-202ENST00000416728 SLC19A3Q9BZV2 496 aa12.37□□□□□ -0.43
PAF1-202ENST00000416728 RACGAP1Q9H0H5 632 aa12.37□□□□□ -0.43
PAF1-202ENST00000416728 C1orf198Q9H425 327 aa12.37□□□□□ -0.43
PAF1-202ENST00000416728 OCEL1Q9H607 264 aa12.37□□□□□ -0.43
PAF1-202ENST00000416728 METTL17Q9H7H0 456 aaPredicted RBP12.37□□□□□ -0.43
PAF1-202ENST00000416728 RNF121Q9H920 327 aa12.37□□□□□ -0.43
PAF1-202ENST00000416728 CDH20Q9HBT6 801 aa12.37□□□□□ -0.43
PAF1-202ENST00000416728 LPAR2Q9HBW0 351 aa12.37□□□□□ -0.43
PAF1-202ENST00000416728 HIF1ANQ9NWT6 349 aa12.37□□□□□ -0.43
PAF1-202ENST00000416728 GPR160Q9UJ42 338 aa12.37□□□□□ -0.43
PAF1-202ENST00000416728 ZNF229Q9UJW7 825 aa12.37□□□□□ -0.43
PAF1-202ENST00000416728 GRIP1Q9Y3R0 1128 aa12.37□□□□□ -0.43
PAF1-202ENST00000416728 FAM157AC9JC47 383 aa12.36□□□□□ -0.43
PAF1-202ENST00000416728 NCR1O76036 304 aa12.36□□□□□ -0.43
PAF1-202ENST00000416728 LYPD3O95274 346 aa12.36□□□□□ -0.43
PAF1-202ENST00000416728 BCL10O95999 233 aa12.36□□□□□ -0.43
PAF1-202ENST00000416728 IGHG1P01857 330 aa12.36□□□□□ -0.43
PAF1-202ENST00000416728 QDPRP09417 244 aa12.36□□□□□ -0.43
PAF1-202ENST00000416728 PGA4P0DJD7 388 aa12.36□□□□□ -0.43
PAF1-202ENST00000416728 PGA3P0DJD8 388 aa12.36□□□□□ -0.43
PAF1-202ENST00000416728 CD247P20963 164 aa12.36□□□□□ -0.43
PAF1-202ENST00000416728 NFYCQ13952 458 aa12.36□□□□□ -0.43
PAF1-202ENST00000416728 SELPLGQ14242 412 aa12.36□□□□□ -0.43
PAF1-202ENST00000416728 ALKBH6Q3KRA9 238 aa12.36□□□□□ -0.43
PAF1-202ENST00000416728 SLC36A2Q495M3 483 aa12.36□□□□□ -0.43
PAF1-202ENST00000416728 INTS11Q5TA45 600 aaKnown RBP12.36□□□□□ -0.43
PAF1-202ENST00000416728 SHQ1Q6PI26 577 aaKnown RBP12.36□□□□□ -0.43
PAF1-202ENST00000416728 SLC16A14Q7RTX9 510 aa12.36□□□□□ -0.43
PAF1-202ENST00000416728 PAQR4Q8N4S7 273 aaPredicted RBP12.36□□□□□ -0.43
PAF1-202ENST00000416728 OR4K5Q8NGD3 323 aa12.36□□□□□ -0.43
PAF1-202ENST00000416728 OR51F2Q8NH61 342 aa12.36□□□□□ -0.43
PAF1-202ENST00000416728 SNX33Q8WV41 574 aa12.36□□□□□ -0.43
PAF1-202ENST00000416728 ZNF426Q9BUY5 554 aa12.36□□□□□ -0.43
PAF1-202ENST00000416728 KAT8Q9H7Z6 458 aaKnown RBP12.36□□□□□ -0.43
PAF1-202ENST00000416728 TREM2Q9NZC2 230 aa12.36□□□□□ -0.43
PAF1-202ENST00000416728 TAAR3PQ9P1P4 343 aa12.36□□□□□ -0.43
PAF1-202ENST00000416728 MCIDASD6RGH6 385 aa12.35□□□□□ -0.43
PAF1-202ENST00000416728 BLOC1S5-TXNDC5H3BN57 136 aa12.35□□□□□ -0.43
PAF1-202ENST00000416728 WNT9BO14905 357 aa12.35□□□□□ -0.43
PAF1-202ENST00000416728 RP2O75695 350 aa12.35□□□□□ -0.43
PAF1-202ENST00000416728 SNAP29O95721 258 aa12.35□□□□□ -0.43
PAF1-202ENST00000416728 PTHP01270 115 aa12.35□□□□□ -0.43
PAF1-202ENST00000416728 LCKP06239 509 aa12.35□□□□□ -0.43
PAF1-202ENST00000416728 ASAH2BP0C7U1 165 aa12.35□□□□□ -0.43
PAF1-202ENST00000416728 GAAP10253 952 aa12.35□□□□□ -0.43
PAF1-202ENST00000416728 CCL2P13500 99 aa12.35□□□□□ -0.43
PAF1-202ENST00000416728 PCGF2P35227 344 aa12.35□□□□□ -0.43
PAF1-202ENST00000416728 MAGEB1P43366 347 aa12.35□□□□□ -0.43
PAF1-202ENST00000416728 ZNF84P51523 738 aa12.35□□□□□ -0.43
PAF1-202ENST00000416728 KLF3P57682 345 aaPredicted RBP12.35□□□□□ -0.43
PAF1-202ENST00000416728 CLRN1P58418 232 aa12.35□□□□□ -0.43
PAF1-202ENST00000416728 PLP2Q04941 152 aa12.35□□□□□ -0.43
PAF1-202ENST00000416728 SCGB2A2Q13296 93 aa12.35□□□□□ -0.43
PAF1-202ENST00000416728 TBC1D28Q2M2D7 210 aa12.35□□□□□ -0.43
PAF1-202ENST00000416728 NRN1LQ496H8 165 aa12.35□□□□□ -0.43
PAF1-202ENST00000416728 TMEM154Q6P9G4 183 aa12.35□□□□□ -0.43
PAF1-202ENST00000416728 RETREG3Q86VR2 466 aa12.35□□□□□ -0.43
PAF1-202ENST00000416728 TSPYL5Q86VY4 417 aaPredicted RBP12.35□□□□□ -0.43
PAF1-202ENST00000416728 MEX3DQ86XN8 651 aaKnown RBP12.35□□□□□ -0.43
PAF1-202ENST00000416728 SYNPRQ8TBG9 265 aa12.35□□□□□ -0.43
PAF1-202ENST00000416728 C11orf40Q8WZ69 217 aa12.35□□□□□ -0.43
PAF1-202ENST00000416728 TAMM41Q96BW9 452 aa12.35□□□□□ -0.43
PAF1-202ENST00000416728 ATP6V1G3Q96LB4 118 aa12.35□□□□□ -0.43
PAF1-202ENST00000416728 PCDHAC1Q9H158 963 aa12.35□□□□□ -0.43
PAF1-202ENST00000416728 OR51B6Q9H340 312 aa12.35□□□□□ -0.43
PAF1-202ENST00000416728 HINT3Q9NQE9 182 aaKnown RBP12.35□□□□□ -0.43
PAF1-202ENST00000416728 TRIM33Q9UPN9 1127 aa12.35□□□□□ -0.43
PAF1-202ENST00000416728 IGLV3-9A0A075B6K5 115 aa12.34□□□□□ -0.43
PAF1-202ENST00000416728 A0A0A6YYJ9 748 aa12.34□□□□□ -0.43
PAF1-202ENST00000416728 IQCMA0A1B0GVH7 501 aa12.34□□□□□ -0.43
PAF1-202ENST00000416728 A0A1W2PRG6 482 aa12.34□□□□□ -0.43
PAF1-202ENST00000416728 C17orf100A8MU93 164 aa12.34□□□□□ -0.43
PAF1-202ENST00000416728 CLPTM1O96005 669 aa12.34□□□□□ -0.43
PAF1-202ENST00000416728 ZNF250P15622 560 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms