RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 GPR148Q8TDV2 347 aa8.89□□□□□ -0.99
CD44-206ENST00000415148 TSSK2Q96PF2 358 aa8.89□□□□□ -0.99
CD44-206ENST00000415148 AIFM2Q9BRQ8 373 aa8.89□□□□□ -0.99
CD44-206ENST00000415148 ALX4Q9H161 411 aaPredicted RBP8.89□□□□□ -0.99
CD44-206ENST00000415148 OR10A5Q9H207 317 aa8.89□□□□□ -0.99
CD44-206ENST00000415148 WDR76Q9H967 626 aa8.89□□□□□ -0.99
CD44-206ENST00000415148 MMP25Q9NPA2 562 aa8.89□□□□□ -0.99
CD44-206ENST00000415148 PRTFDC1Q9NRG1 225 aa8.89□□□□□ -0.99
CD44-206ENST00000415148 STARD5Q9NSY2 213 aa8.89□□□□□ -0.99
CD44-206ENST00000415148 GRHPRQ9UBQ7 328 aa8.89□□□□□ -0.99
CD44-206ENST00000415148 PRODH2Q9UF12 536 aa8.89□□□□□ -0.99
CD44-206ENST00000415148 LAMP5Q9UJQ1 280 aa8.89□□□□□ -0.99
CD44-206ENST00000415148 DTX4Q9Y2E6 619 aa8.89□□□□□ -0.99
CD44-206ENST00000415148 YBX2Q9Y2T7 364 aaKnown RBP8.89□□□□□ -0.99
CD44-206ENST00000415148 CACNA1IQ9P0X4 2223 aa8.89□□□□□ -0.99
CD44-206ENST00000415148 FXYD6-FXYD2A0A087WZ82 144 aa8.88□□□□□ -0.99
CD44-206ENST00000415148 TGFBR3LH3BV60 316 aa8.88□□□□□ -0.99
CD44-206ENST00000415148 SMAD9O15198 467 aaKnown RBP8.88□□□□□ -0.99
CD44-206ENST00000415148 KLF8O95600 359 aaPredicted RBP8.88□□□□□ -0.99
CD44-206ENST00000415148 MELTFP08582 738 aa8.88□□□□□ -0.99
CD44-206ENST00000415148 PPP3CBP16298 524 aa8.88□□□□□ -0.99
CD44-206ENST00000415148 ALOX5APP20292 161 aa8.88□□□□□ -0.99
CD44-206ENST00000415148 SOX2P48431 317 aa8.88□□□□□ -0.99
CD44-206ENST00000415148 EFNB2P52799 333 aa8.88□□□□□ -0.99
CD44-206ENST00000415148 TOMM20Q15388 145 aa8.88□□□□□ -0.99
CD44-206ENST00000415148 ARMC6Q6NXE6 501 aa8.88□□□□□ -0.99
CD44-206ENST00000415148 MAMSTRQ6ZN01 415 aa8.88□□□□□ -0.99
CD44-206ENST00000415148 TMPRSS12Q86WS5 348 aa8.88□□□□□ -0.99
CD44-206ENST00000415148 ZNF615Q8N8J6 731 aa8.88□□□□□ -0.99
CD44-206ENST00000415148 OR6N1Q8NGY5 312 aa8.88□□□□□ -0.99
CD44-206ENST00000415148 OR2G2Q8NGZ5 317 aa8.88□□□□□ -0.99
CD44-206ENST00000415148 OR10AC1Q8NH08 325 aa8.88□□□□□ -0.99
CD44-206ENST00000415148 C16orf52Q8NHV5 167 aa8.88□□□□□ -0.99
CD44-206ENST00000415148 SCARB1Q8WTV0 552 aa8.88□□□□□ -0.99
CD44-206ENST00000415148 ZDHHC1Q8WTX9 485 aa8.88□□□□□ -0.99
CD44-206ENST00000415148 MCHR2Q969V1 340 aa8.88□□□□□ -0.99
CD44-206ENST00000415148 DCBLD2Q96PD2 775 aa8.88□□□□□ -0.99
CD44-206ENST00000415148 GINS4Q9BRT9 223 aa8.88□□□□□ -0.99
CD44-206ENST00000415148 PELOQ9BRX2 385 aaKnown RBP8.88□□□□□ -0.99
CD44-206ENST00000415148 FXYD6Q9H0Q3 95 aa8.88□□□□□ -0.99
CD44-206ENST00000415148 UBQLN4Q9NRR5 601 aa8.88□□□□□ -0.99
CD44-206ENST00000415148 GLS2Q9UI32 602 aa8.88□□□□□ -0.99
CD44-206ENST00000415148 GGT3PA6NGU5 568 aa8.88□□□□□ -0.99
CD44-206ENST00000415148 HRKO00198 91 aa8.88□□□□□ -0.99
CD44-206ENST00000415148 RENP00797 406 aa8.88□□□□□ -0.99
CD44-206ENST00000415148 AKAIN1P0CW23 69 aa8.88□□□□□ -0.99
CD44-206ENST00000415148 GABRA1P14867 456 aa8.88□□□□□ -0.99
CD44-206ENST00000415148 MST1P26927 711 aa8.88□□□□□ -0.99
CD44-206ENST00000415148 RPS27P42677 84 aaKnown RBP8.88□□□□□ -0.99
CD44-206ENST00000415148 GMFBP60983 142 aa8.88□□□□□ -0.99
CD44-206ENST00000415148 MAT1AQ00266 395 aaKnown RBP8.88□□□□□ -0.99
CD44-206ENST00000415148 ODF4Q2M2E3 257 aa8.88□□□□□ -0.99
CD44-206ENST00000415148 PCGF3Q3KNV8 242 aa8.88□□□□□ -0.99
CD44-206ENST00000415148 EEF1A1P5Q5VTE0 462 aa8.88□□□□□ -0.99
CD44-206ENST00000415148 C17orf107Q6ZR85 190 aa8.88□□□□□ -0.99
CD44-206ENST00000415148 Q6ZSR6 202 aa8.88□□□□□ -0.99
CD44-206ENST00000415148 OVCH2Q7RTZ1 564 aa8.88□□□□□ -0.99
CD44-206ENST00000415148 MCATQ8IVS2 390 aaKnown RBP8.88□□□□□ -0.99
CD44-206ENST00000415148 LSM14AQ8ND56 463 aaKnown RBP8.88□□□□□ -0.99
CD44-206ENST00000415148 BVESQ8NE79 360 aa8.88□□□□□ -0.99
CD44-206ENST00000415148 OR8K3Q8NH51 312 aa8.88□□□□□ -0.99
CD44-206ENST00000415148 ST8SIA2Q92186 375 aa8.88□□□□□ -0.99
CD44-206ENST00000415148 FGF14Q92915 247 aa8.88□□□□□ -0.99
CD44-206ENST00000415148 SLC25A28Q96A46 364 aa8.88□□□□□ -0.99
CD44-206ENST00000415148 ARL6Q9H0F7 186 aa8.88□□□□□ -0.99
CD44-206ENST00000415148 SRA1Q9HD15 236 aaKnown RBP8.88□□□□□ -0.99
CD44-206ENST00000415148 FAM60AQ9NP50 221 aa8.88□□□□□ -0.99
CD44-206ENST00000415148 MED11Q9P086 117 aa8.88□□□□□ -0.99
CD44-206ENST00000415148 OPN4Q9UHM6 478 aa8.88□□□□□ -0.99
CD44-206ENST00000415148 ERVK-19Q9WJR5 959 aa8.88□□□□□ -0.99
CD44-206ENST00000415148 ARID1BQ8NFD5 2236 aaPredicted RBP8.88□□□□□ -0.99
CD44-206ENST00000415148 EYSQ5T1H1 3165 aa8.88□□□□□ -0.99
CD44-206ENST00000415148 LRP4O75096 1905 aa8.88□□□□□ -0.99
CD44-206ENST00000415148 TRAV8-7A0A075B6U6 113 aa8.87□□□□□ -0.99
CD44-206ENST00000415148 A0A0A6YYC8 382 aaPredicted RBP8.87□□□□□ -0.99
CD44-206ENST00000415148 KRBOX1C9JBD0 128 aa8.87□□□□□ -0.99
CD44-206ENST00000415148 I3L1I5 382 aaPredicted RBP8.87□□□□□ -0.99
CD44-206ENST00000415148 SULT1C2O00338 296 aa8.87□□□□□ -0.99
CD44-206ENST00000415148 GOSR2O14653 212 aa8.87□□□□□ -0.99
CD44-206ENST00000415148 PRKNO60260 465 aaPredicted RBP8.87□□□□□ -0.99
CD44-206ENST00000415148 RP2O75695 350 aa8.87□□□□□ -0.99
CD44-206ENST00000415148 RLN2P04090 185 aa8.87□□□□□ -0.99
CD44-206ENST00000415148 CA3P07451 260 aa8.87□□□□□ -0.99
CD44-206ENST00000415148 FGF2P09038 288 aa8.87□□□□□ -0.99
CD44-206ENST00000415148 CSF2RBP32927 897 aa8.87□□□□□ -0.99
CD44-206ENST00000415148 RABIFP47224 123 aa8.87□□□□□ -0.99
CD44-206ENST00000415148 CENPAP49450 140 aa8.87□□□□□ -0.99
CD44-206ENST00000415148 HSD17B7P56937 341 aa8.87□□□□□ -0.99
CD44-206ENST00000415148 FAM74A1Q5RGS3 127 aa8.87□□□□□ -0.99
CD44-206ENST00000415148 ZNF660Q6AZW8 331 aaPredicted RBP8.87□□□□□ -0.99
CD44-206ENST00000415148 KRT77Q7Z794 578 aa8.87□□□□□ -0.99
CD44-206ENST00000415148 MUC20Q8N307 709 aaPredicted RBP8.87□□□□□ -0.99
CD44-206ENST00000415148 C10orf53Q8N6V4 93 aa8.87□□□□□ -0.99
CD44-206ENST00000415148 ZNF676Q8N7Q3 588 aa8.87□□□□□ -0.99
CD44-206ENST00000415148 OR51A4Q8NGJ6 313 aa8.87□□□□□ -0.99
CD44-206ENST00000415148 PATE1Q8WXA2 126 aa8.87□□□□□ -0.99
CD44-206ENST00000415148 DVL3Q92997 716 aaPredicted RBP8.87□□□□□ -0.99
CD44-206ENST00000415148 MRPS24Q96EL2 167 aaKnown RBP8.87□□□□□ -0.99
CD44-206ENST00000415148 MRGPRX1Q96LB2 322 aa8.87□□□□□ -0.99
CD44-206ENST00000415148 ZNF230Q9UIE0 474 aaPredicted RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms