RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 ZNF655Q8N720 491 aaPredicted RBP8.54□□□□□ -1.04
SNHG3-201ENST00000413987 OTUB1Q96FW1 271 aaPredicted RBP8.54□□□□□ -1.04
SNHG3-201ENST00000413987 BOD1Q96IK1 185 aa8.54□□□□□ -1.04
SNHG3-201ENST00000413987 MRPL13Q9BYD1 178 aaKnown RBP8.54□□□□□ -1.04
SNHG3-201ENST00000413987 TPT1P8Q9HAU6 139 aa8.54□□□□□ -1.04
SNHG3-201ENST00000413987 SGK2Q9HBY8 427 aa8.54□□□□□ -1.04
SNHG3-201ENST00000413987 KLHL1Q9NR64 748 aa8.54□□□□□ -1.04
SNHG3-201ENST00000413987 C20orf141Q9NUB4 165 aa8.54□□□□□ -1.04
SNHG3-201ENST00000413987 COMMD3Q9UBI1 195 aa8.54□□□□□ -1.04
SNHG3-201ENST00000413987 FZD4Q9ULV1 537 aa8.54□□□□□ -1.04
SNHG3-201ENST00000413987 IRGMA1A4Y4 181 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 PCP4L1A6NKN8 68 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 LRRN3E7EW58 273 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 PRAMEF26H0Y7S4 382 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 DUX1O43812 170 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 PRAMEF4O60810 478 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 UPK3AO75631 287 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 SEMA4FO95754 770 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 IGHV4-34P06331 123 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 HBQ1P09105 142 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 FGF9P31371 208 aaPredicted RBP8.53□□□□□ -1.04
SNHG3-201ENST00000413987 CD79BP40259 229 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 KCNJ3P48549 501 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 TSPAN31Q12999 210 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 CCSMST1Q4G0I0 132 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 LBHQ53QV2 105 aaPredicted RBP8.53□□□□□ -1.04
SNHG3-201ENST00000413987 ACTBL2Q562R1 376 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 FIGLAQ6QHK4 219 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 TFAP2EQ6VUC0 442 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 ABHD12BQ7Z5M8 362 aaPredicted RBP8.53□□□□□ -1.04
SNHG3-201ENST00000413987 BMP8AQ7Z5Y6 402 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 TSEN54Q7Z6J9 526 aaKnown RBP8.53□□□□□ -1.04
SNHG3-201ENST00000413987 GLB1L2Q8IW92 636 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 LAS2Q8IYD9 372 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 C17orf78Q8N4C9 275 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 CYB561A3Q8NBI2 242 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 OR5D13Q8NGL4 314 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 SCMH1Q96GD3 660 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 ERMAPQ96PL5 475 aaPredicted RBP8.53□□□□□ -1.04
SNHG3-201ENST00000413987 DUX5Q96PT3 197 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 DIRC2Q96SL1 478 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 FNDC11Q9BVV2 318 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 NMNAT2Q9BZQ4 307 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 LRRN3Q9H3W5 708 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 LDAHQ9H6V9 325 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 CALHM2Q9HA72 323 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 SIT1Q9Y3P8 196 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 M0R129 80 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 GADD45GO95257 159 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 CPSF4O95639 269 aaKnown RBP8.53□□□□□ -1.04
SNHG3-201ENST00000413987 LALBAP00709 142 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 PDYNP01213 254 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 NR2F6P10588 404 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 ZNF44P15621 663 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 LIMS1P48059 325 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 RBBP4Q09028 425 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 MRPL49Q13405 166 aaKnown RBP8.53□□□□□ -1.04
SNHG3-201ENST00000413987 GGTA1PQ4G0N0 100 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 ZNF542PQ5EBM4 170 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 CASP12Q6UXS9 341 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 QSOX2Q6ZRP7 698 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 PIP4P2Q8N4L2 257 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 OR52H1Q8NGJ2 320 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 GEMIN6Q8WXD5 167 aaKnown RBP8.53□□□□□ -1.04
SNHG3-201ENST00000413987 ACOT12Q8WYK0 555 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 RIT1Q92963 219 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 OTULINQ96BN8 352 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 COX14Q96I36 57 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 RBP7Q96R05 134 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 OR51B5Q9H339 312 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 RDH14Q9HBH5 336 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 SCP2D1Q9UJQ7 156 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 BAIAP2Q9UQB8 552 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 MRPS17Q9Y2R5 130 aaKnown RBP8.53□□□□□ -1.04
SNHG3-201ENST00000413987 SNX11Q9Y5W9 270 aa8.53□□□□□ -1.04
SNHG3-201ENST00000413987 PCM1Q15154 2024 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 CASKO14936 926 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 PRKYO43930 277 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 HPGDSO60760 199 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 STK16O75716 305 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 LRATO95237 230 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 RAB36O95755 333 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 ADAP00813 363 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 HTR2AP28223 471 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 GDF5P43026 501 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 PRLHRP49683 370 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 ADORA2A-AS1P86434 159 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 FLI1Q01543 452 aaPredicted RBP8.52□□□□□ -1.05
SNHG3-201ENST00000413987 PUDPQ08623 228 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 FGL1Q08830 312 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 ILKQ13418 452 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 TPBGQ13641 420 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 DOC2BQ14184 412 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 RGNQ15493 299 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 LGALSLQ3ZCW2 172 aaPredicted RBP8.52□□□□□ -1.05
SNHG3-201ENST00000413987 SYTL3Q4VX76 610 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 OR5M10Q6IEU7 315 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 SYT12Q8IV01 421 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 AQP11Q8NBQ7 271 aa8.52□□□□□ -1.05
SNHG3-201ENST00000413987 OR9Q2Q8NGE9 314 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms