RNA–Protein interactions for RNA: ENST00000413574.6

CSNK1E-206, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 1,631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-206ENST00000413574 ABHD12BQ7Z5M8 362 aaPredicted RBP26.89■■□□□ 1.9
CSNK1E-206ENST00000413574 OR4K13Q8NH42 304 aa26.89■■□□□ 1.9
CSNK1E-206ENST00000413574 RBM4BQ9BQ04 359 aaKnown RBP26.89■■□□□ 1.9
CSNK1E-206ENST00000413574 RBM4Q9BWF3 364 aaKnown RBP26.89■■□□□ 1.9
CSNK1E-206ENST00000413574 B3GAT2Q9NPZ5 323 aa26.89■■□□□ 1.9
CSNK1E-206ENST00000413574 NKX1-2Q9UD57 310 aaPredicted RBP26.89■■□□□ 1.9
CSNK1E-206ENST00000413574 IGKV1D-43A0A0B4J1Z2 117 aa26.88■■□□□ 1.89
CSNK1E-206ENST00000413574 RPL36A-HNRNPH2H7BZ11 118 aa26.88■■□□□ 1.89
CSNK1E-206ENST00000413574 SEC14L2O76054 403 aa26.88■■□□□ 1.89
CSNK1E-206ENST00000413574 DAG1Q14118 895 aa26.88■■□□□ 1.89
CSNK1E-206ENST00000413574 TMEM236Q5W0B7 351 aa26.88■■□□□ 1.89
CSNK1E-206ENST00000413574 OR2T33Q8NG76 320 aa26.88■■□□□ 1.89
CSNK1E-206ENST00000413574 LINC01560Q8TB33 94 aa26.88■■□□□ 1.89
CSNK1E-206ENST00000413574 S100PBPQ96BU1 408 aa26.88■■□□□ 1.89
CSNK1E-206ENST00000413574 NMD3Q96D46 503 aaKnown RBP26.88■■□□□ 1.89
CSNK1E-206ENST00000413574 SLC29A1Q99808 456 aa26.88■■□□□ 1.89
CSNK1E-206ENST00000413574 GPR52Q9Y2T5 361 aa26.88■■□□□ 1.89
CSNK1E-206ENST00000413574 CIB4A0PJX0 185 aa26.87■■□□□ 1.89
CSNK1E-206ENST00000413574 IL32P24001 234 aa26.87■■□□□ 1.89
CSNK1E-206ENST00000413574 PARP8Q8N3A8 854 aa26.87■■□□□ 1.89
CSNK1E-206ENST00000413574 LNX2Q8N448 690 aa26.87■■□□□ 1.89
CSNK1E-206ENST00000413574 EME1Q96AY2 570 aa26.87■■□□□ 1.89
CSNK1E-206ENST00000413574 C9orf16Q9BUW7 83 aa26.87■■□□□ 1.89
CSNK1E-206ENST00000413574 ALG12Q9BV10 488 aa26.87■■□□□ 1.89
CSNK1E-206ENST00000413574 ACTR6Q9GZN1 396 aa26.87■■□□□ 1.89
CSNK1E-206ENST00000413574 DCLRE1BQ9H816 532 aa26.87■■□□□ 1.89
CSNK1E-206ENST00000413574 PRR14LQ5THK1 2151 aa26.87■■□□□ 1.89
CSNK1E-206ENST00000413574 CRYBG3Q68DQ2 2970 aa26.87■■□□□ 1.89
CSNK1E-206ENST00000413574 SLC22A23A1A5C7 686 aa26.87■■□□□ 1.89
CSNK1E-206ENST00000413574 PRSS37A4D1T9 235 aa26.87■■□□□ 1.89
CSNK1E-206ENST00000413574 CENPBD1B2RD01 187 aa26.87■■□□□ 1.89
CSNK1E-206ENST00000413574 ALPLP05186 524 aa26.87■■□□□ 1.89
CSNK1E-206ENST00000413574 IGFBP2P18065 325 aa26.87■■□□□ 1.89
CSNK1E-206ENST00000413574 EPHA2P29317 976 aa26.87■■□□□ 1.89
CSNK1E-206ENST00000413574 ARF1P84077 181 aaKnown RBP26.87■■□□□ 1.89
CSNK1E-206ENST00000413574 GINS1Q14691 196 aa26.87■■□□□ 1.89
CSNK1E-206ENST00000413574 GABRA6Q16445 453 aa26.87■■□□□ 1.89
CSNK1E-206ENST00000413574 ACSM5Q6NUN0 579 aa26.87■■□□□ 1.89
CSNK1E-206ENST00000413574 NMNAT3Q96T66 252 aa26.87■■□□□ 1.89
CSNK1E-206ENST00000413574 HDHD5Q9BXW7 423 aa26.87■■□□□ 1.89
CSNK1E-206ENST00000413574 PLEKHB1Q9UF11 243 aaPredicted RBP26.87■■□□□ 1.89
CSNK1E-206ENST00000413574 GIPRP48546 466 aa26.86■■□□□ 1.89
CSNK1E-206ENST00000413574 PCYT1AP49585 367 aa26.86■■□□□ 1.89
CSNK1E-206ENST00000413574 CRISP1P54107 249 aa26.86■■□□□ 1.89
CSNK1E-206ENST00000413574 SORDQ00796 357 aa26.86■■□□□ 1.89
CSNK1E-206ENST00000413574 TRIP10Q15642 601 aa26.86■■□□□ 1.89
CSNK1E-206ENST00000413574 LRRC36Q1X8D7 754 aa26.86■■□□□ 1.89
CSNK1E-206ENST00000413574 PGGHGQ32M88 737 aa26.86■■□□□ 1.89
CSNK1E-206ENST00000413574 LPCAT4Q643R3 524 aa26.86■■□□□ 1.89
CSNK1E-206ENST00000413574 ZBTB49Q6ZSB9 765 aa26.86■■□□□ 1.89
CSNK1E-206ENST00000413574 SDR9C7Q8NEX9 313 aa26.86■■□□□ 1.89
CSNK1E-206ENST00000413574 OR52E2Q8NGJ4 325 aa26.86■■□□□ 1.89
CSNK1E-206ENST00000413574 NSMAFQ92636 917 aa26.86■■□□□ 1.89
CSNK1E-206ENST00000413574 HTRA1Q92743 480 aa26.86■■□□□ 1.89
CSNK1E-206ENST00000413574 IDH3BO43837 385 aa26.85■■□□□ 1.89
CSNK1E-206ENST00000413574 POLR2IP36954 125 aaKnown RBP26.85■■□□□ 1.89
CSNK1E-206ENST00000413574 SP5Q6BEB4 398 aaPredicted RBP26.85■■□□□ 1.89
CSNK1E-206ENST00000413574 SLC27A4Q6P1M0 643 aa26.85■■□□□ 1.89
CSNK1E-206ENST00000413574 LEG1Q6P5S2 330 aa26.85■■□□□ 1.89
CSNK1E-206ENST00000413574 MEX3BQ6ZN04 569 aaKnown RBP26.85■■□□□ 1.89
CSNK1E-206ENST00000413574 WFIKKN1Q96NZ8 548 aa26.85■■□□□ 1.89
CSNK1E-206ENST00000413574 SYT4Q9H2B2 425 aa26.85■■□□□ 1.89
CSNK1E-206ENST00000413574 USE1Q9NZ43 259 aa26.85■■□□□ 1.89
CSNK1E-206ENST00000413574 PTPN13Q12923 2485 aa26.85■■□□□ 1.89
CSNK1E-206ENST00000413574 A0A096LPE4 126 aa26.84■■□□□ 1.89
CSNK1E-206ENST00000413574 A0A1W2PPZ6 126 aa26.84■■□□□ 1.89
CSNK1E-206ENST00000413574 DHHO43323 396 aa26.84■■□□□ 1.89
CSNK1E-206ENST00000413574 ALDH3A2P51648 485 aa26.84■■□□□ 1.89
CSNK1E-206ENST00000413574 CDK5Q00535 292 aa26.84■■□□□ 1.89
CSNK1E-206ENST00000413574 KHDRBS1Q07666 443 aaKnown RBP eCLIP26.84■■□□□ 1.89
CSNK1E-206ENST00000413574 STK11Q15831 433 aa26.84■■□□□ 1.89
CSNK1E-206ENST00000413574 HIKESHIQ53FT3 197 aa26.84■■□□□ 1.89
CSNK1E-206ENST00000413574 ZNF362Q5T0B9 420 aaPredicted RBP26.84■■□□□ 1.89
CSNK1E-206ENST00000413574 ADCK1Q86TW2 530 aa26.84■■□□□ 1.89
CSNK1E-206ENST00000413574 JAZF1Q86VZ6 243 aa26.84■■□□□ 1.89
CSNK1E-206ENST00000413574 DMRTC2Q8IXT2 367 aaPredicted RBP26.84■■□□□ 1.89
CSNK1E-206ENST00000413574 STEAP2Q8NFT2 490 aa26.84■■□□□ 1.89
CSNK1E-206ENST00000413574 OR1K1Q8NGR3 316 aa26.84■■□□□ 1.89
CSNK1E-206ENST00000413574 MUS81Q96NY9 551 aa26.84■■□□□ 1.89
CSNK1E-206ENST00000413574 RBP7Q96R05 134 aa26.84■■□□□ 1.89
CSNK1E-206ENST00000413574 A0A1W2PR80 420 aa26.83■■□□□ 1.89
CSNK1E-206ENST00000413574 ZNF99A8MXY4 864 aaPredicted RBP26.83■■□□□ 1.89
CSNK1E-206ENST00000413574 PTGES3Q15185 160 aaKnown RBP26.83■■□□□ 1.89
CSNK1E-206ENST00000413574 ETFDHQ16134 617 aa26.83■■□□□ 1.89
CSNK1E-206ENST00000413574 THEM4Q5T1C6 240 aa26.83■■□□□ 1.89
CSNK1E-206ENST00000413574 SLC25A47Q6Q0C1 308 aa26.83■■□□□ 1.89
CSNK1E-206ENST00000413574 CYB561A3Q8NBI2 242 aa26.83■■□□□ 1.89
CSNK1E-206ENST00000413574 ZC3HAV1LQ96H79 300 aaKnown RBP26.83■■□□□ 1.89
CSNK1E-206ENST00000413574 TSSK2Q96PF2 358 aa26.83■■□□□ 1.89
CSNK1E-206ENST00000413574 NELFAQ9H3P2 528 aa26.83■■□□□ 1.89
CSNK1E-206ENST00000413574 FN3KQ9H479 309 aa26.83■■□□□ 1.89
CSNK1E-206ENST00000413574 VSX1Q9NZR4 365 aaPredicted RBP26.83■■□□□ 1.89
CSNK1E-206ENST00000413574 BAIAP2Q9UQB8 552 aa26.83■■□□□ 1.89
CSNK1E-206ENST00000413574 TUBAL3A6NHL2 446 aa26.83■■□□□ 1.88
CSNK1E-206ENST00000413574 PEX2P28328 305 aa26.83■■□□□ 1.88
CSNK1E-206ENST00000413574 ZNF133P52736 654 aaPredicted RBP26.83■■□□□ 1.88
CSNK1E-206ENST00000413574 ESRRGP62508 458 aa26.83■■□□□ 1.88
CSNK1E-206ENST00000413574 TGFBR3Q03167 851 aa26.83■■□□□ 1.88
CSNK1E-206ENST00000413574 HIST2H2BCQ6DN03 193 aa26.83■■□□□ 1.88
CSNK1E-206ENST00000413574 ACBD4Q8NC06 268 aa26.83■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms