RNA–Protein interactions for RNA: ENST00000411527.5

HLA-DQB2-229, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 1,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-229ENST00000411527 AWAT1Q58HT5 328 aa12.15□□□□□ -0.46
HLA-DQB2-229ENST00000411527 LRFN4Q6PJG9 635 aa12.15□□□□□ -0.46
HLA-DQB2-229ENST00000411527 SLC35D2Q76EJ3 337 aa12.15□□□□□ -0.46
HLA-DQB2-229ENST00000411527 MAVSQ7Z434 540 aa12.15□□□□□ -0.46
HLA-DQB2-229ENST00000411527 C10orf111Q8N326 155 aa12.15□□□□□ -0.46
HLA-DQB2-229ENST00000411527 BPIFB2Q8N4F0 458 aa12.15□□□□□ -0.46
HLA-DQB2-229ENST00000411527 ZNF519Q8TB69 540 aa12.15□□□□□ -0.46
HLA-DQB2-229ENST00000411527 NANPQ8TBE9 248 aa12.15□□□□□ -0.46
HLA-DQB2-229ENST00000411527 C11orf40Q8WZ69 217 aa12.15□□□□□ -0.46
HLA-DQB2-229ENST00000411527 TMEM43Q9BTV4 400 aa12.15□□□□□ -0.46
HLA-DQB2-229ENST00000411527 DECR2Q9NUI1 292 aa12.15□□□□□ -0.46
HLA-DQB2-229ENST00000411527 SLCO1C1Q9NYB5 712 aa12.15□□□□□ -0.46
HLA-DQB2-229ENST00000411527 NKIRAS2Q9NYR9 191 aa12.15□□□□□ -0.46
HLA-DQB2-229ENST00000411527 SLC25A37Q9NYZ2 338 aa12.15□□□□□ -0.46
HLA-DQB2-229ENST00000411527 SLAMF8Q9P0V8 285 aa12.15□□□□□ -0.46
HLA-DQB2-229ENST00000411527 SLC13A4Q9UKG4 626 aa12.15□□□□□ -0.46
HLA-DQB2-229ENST00000411527 IGHV1-69-2A0A0G2JMI3 117 aa12.14□□□□□ -0.47
HLA-DQB2-229ENST00000411527 PRORSD1PA6NEY8 169 aa12.14□□□□□ -0.47
HLA-DQB2-229ENST00000411527 J3QLI3 93 aa12.14□□□□□ -0.47
HLA-DQB2-229ENST00000411527 ZNF500O60304 480 aaPredicted RBP12.14□□□□□ -0.47
HLA-DQB2-229ENST00000411527 ENTPD5O75356 428 aa12.14□□□□□ -0.47
HLA-DQB2-229ENST00000411527 FARS2O95363 451 aaKnown RBP12.14□□□□□ -0.47
HLA-DQB2-229ENST00000411527 MT-ATP6P00846 226 aa12.14□□□□□ -0.47
HLA-DQB2-229ENST00000411527 RAD52P43351 418 aa12.14□□□□□ -0.47
HLA-DQB2-229ENST00000411527 DCAF12L2Q5VW00 463 aa12.14□□□□□ -0.47
HLA-DQB2-229ENST00000411527 TMEM53Q6P2H8 277 aa12.14□□□□□ -0.47
HLA-DQB2-229ENST00000411527 RANBP3LQ86VV4 465 aaPredicted RBP12.14□□□□□ -0.47
HLA-DQB2-229ENST00000411527 MSRB3Q8IXL7 192 aa12.14□□□□□ -0.47
HLA-DQB2-229ENST00000411527 ZDHHC22Q8N966 263 aa12.14□□□□□ -0.47
HLA-DQB2-229ENST00000411527 ICA1LQ8NDH6 482 aa12.14□□□□□ -0.47
HLA-DQB2-229ENST00000411527 OR6X1Q8NH79 312 aa12.14□□□□□ -0.47
HLA-DQB2-229ENST00000411527 ZNF566Q969W8 418 aa12.14□□□□□ -0.47
HLA-DQB2-229ENST00000411527 ZNF607Q96SK3 696 aa12.14□□□□□ -0.47
HLA-DQB2-229ENST00000411527 ESM1Q9NQ30 184 aa12.14□□□□□ -0.47
HLA-DQB2-229ENST00000411527 TMEM38BQ9NVV0 291 aa12.14□□□□□ -0.47
HLA-DQB2-229ENST00000411527 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.14□□□□□ -0.47
HLA-DQB2-229ENST00000411527 WIPI2Q9Y4P8 454 aa12.14□□□□□ -0.47
HLA-DQB2-229ENST00000411527 V9GYY5 206 aaPredicted RBP12.14□□□□□ -0.47
HLA-DQB2-229ENST00000411527 ARHGAP32A7KAX9 2087 aa12.14□□□□□ -0.47
HLA-DQB2-229ENST00000411527 TMEM120BA0PK00 339 aa12.13□□□□□ -0.47
HLA-DQB2-229ENST00000411527 CLDN25C9JDP6 229 aa12.13□□□□□ -0.47
HLA-DQB2-229ENST00000411527 DHHO43323 396 aa12.13□□□□□ -0.47
HLA-DQB2-229ENST00000411527 SERPINB7O75635 380 aa12.13□□□□□ -0.47
HLA-DQB2-229ENST00000411527 PTHP01270 115 aa12.13□□□□□ -0.47
HLA-DQB2-229ENST00000411527 IGHV2-5P01817 119 aa12.13□□□□□ -0.47
HLA-DQB2-229ENST00000411527 DRD4P21917 467 aa12.13□□□□□ -0.47
HLA-DQB2-229ENST00000411527 SLC6A2P23975 617 aa12.13□□□□□ -0.47
HLA-DQB2-229ENST00000411527 AQP1P29972 269 aa12.13□□□□□ -0.47
HLA-DQB2-229ENST00000411527 UCP2P55851 309 aa12.13□□□□□ -0.47
HLA-DQB2-229ENST00000411527 SCARB2Q14108 478 aa12.13□□□□□ -0.47
HLA-DQB2-229ENST00000411527 MELKQ14680 651 aa12.13□□□□□ -0.47
HLA-DQB2-229ENST00000411527 MOGQ16653 247 aa12.13□□□□□ -0.47
HLA-DQB2-229ENST00000411527 TSTQ16762 297 aaKnown RBP12.13□□□□□ -0.47
HLA-DQB2-229ENST00000411527 TBC1D28Q2M2D7 210 aa12.13□□□□□ -0.47
HLA-DQB2-229ENST00000411527 HFEQ30201 348 aa12.13□□□□□ -0.47
HLA-DQB2-229ENST00000411527 LRIF1Q5T3J3 769 aa12.13□□□□□ -0.47
HLA-DQB2-229ENST00000411527 SWT1Q5T5J6 900 aaKnown RBP12.13□□□□□ -0.47
HLA-DQB2-229ENST00000411527 USP51Q70EK9 711 aa12.13□□□□□ -0.47
HLA-DQB2-229ENST00000411527 ARMC8Q8IUR7 673 aa12.13□□□□□ -0.47
HLA-DQB2-229ENST00000411527 BHLHE22Q8NFJ8 381 aaPredicted RBP12.13□□□□□ -0.47
HLA-DQB2-229ENST00000411527 OR4K5Q8NGD3 323 aa12.13□□□□□ -0.47
HLA-DQB2-229ENST00000411527 OR1J2Q8NGS2 313 aa12.13□□□□□ -0.47
HLA-DQB2-229ENST00000411527 C22orf15Q8WYQ4 148 aa12.13□□□□□ -0.47
HLA-DQB2-229ENST00000411527 GTF3AQ92664 365 aaKnown RBP12.13□□□□□ -0.47
HLA-DQB2-229ENST00000411527 RAB1CQ92928 201 aa12.13□□□□□ -0.47
HLA-DQB2-229ENST00000411527 TRIM44Q96DX7 344 aaPredicted RBP12.13□□□□□ -0.47
HLA-DQB2-229ENST00000411527 TIMD4Q96H15 378 aa12.13□□□□□ -0.47
HLA-DQB2-229ENST00000411527 SLC25A44Q96H78 314 aaPredicted RBP12.13□□□□□ -0.47
HLA-DQB2-229ENST00000411527 MCHR1Q99705 422 aa12.13□□□□□ -0.47
HLA-DQB2-229ENST00000411527 BCL2L14Q9BZR8 327 aa12.13□□□□□ -0.47
HLA-DQB2-229ENST00000411527 LRMDAQ9H2I8 198 aa12.13□□□□□ -0.47
HLA-DQB2-229ENST00000411527 C1orf198Q9H425 327 aa12.13□□□□□ -0.47
HLA-DQB2-229ENST00000411527 C7orf69Q9H7B7 122 aa12.13□□□□□ -0.47
HLA-DQB2-229ENST00000411527 TAS2R5Q9NYW4 299 aa12.13□□□□□ -0.47
HLA-DQB2-229ENST00000411527 PCDHGB1Q9Y5G3 927 aa12.13□□□□□ -0.47
HLA-DQB2-229ENST00000411527 CACNG2Q9Y698 323 aa12.13□□□□□ -0.47
HLA-DQB2-229ENST00000411527 IQCMA0A1B0GVH7 501 aa12.12□□□□□ -0.47
HLA-DQB2-229ENST00000411527 RNF13O43567 381 aa12.12□□□□□ -0.47
HLA-DQB2-229ENST00000411527 SNAP29O95721 258 aa12.12□□□□□ -0.47
HLA-DQB2-229ENST00000411527 CH25HO95992 272 aa12.12□□□□□ -0.47
HLA-DQB2-229ENST00000411527 MT-ND5P03915 603 aa12.12□□□□□ -0.47
HLA-DQB2-229ENST00000411527 QDPRP09417 244 aa12.12□□□□□ -0.47
HLA-DQB2-229ENST00000411527 PPIBP23284 216 aaKnown RBP12.12□□□□□ -0.47
HLA-DQB2-229ENST00000411527 FPR2P25090 351 aa12.12□□□□□ -0.47
HLA-DQB2-229ENST00000411527 GLO1Q04760 184 aa12.12□□□□□ -0.47
HLA-DQB2-229ENST00000411527 PLP2Q04941 152 aa12.12□□□□□ -0.47
HLA-DQB2-229ENST00000411527 ZP4Q12836 540 aa12.12□□□□□ -0.47
HLA-DQB2-229ENST00000411527 SLC36A2Q495M3 483 aa12.12□□□□□ -0.47
HLA-DQB2-229ENST00000411527 LINC00114Q6XXX2 140 aa12.12□□□□□ -0.47
HLA-DQB2-229ENST00000411527 ZNF771Q7L3S4 317 aaPredicted RBP12.12□□□□□ -0.47
HLA-DQB2-229ENST00000411527 SLC16A14Q7RTX9 510 aa12.12□□□□□ -0.47
HLA-DQB2-229ENST00000411527 DPPA2Q7Z7J5 298 aa12.12□□□□□ -0.47
HLA-DQB2-229ENST00000411527 TMEM38AQ9H6F2 299 aa12.12□□□□□ -0.47
HLA-DQB2-229ENST00000411527 EVA1AQ9H8M9 152 aa12.12□□□□□ -0.47
HLA-DQB2-229ENST00000411527 SAP30LQ9HAJ7 183 aa12.12□□□□□ -0.47
HLA-DQB2-229ENST00000411527 TCF7L2Q9NQB0 619 aa12.12□□□□□ -0.47
HLA-DQB2-229ENST00000411527 DDX28Q9NUL7 540 aaKnown RBP12.12□□□□□ -0.47
HLA-DQB2-229ENST00000411527 VAPAQ9P0L0 249 aa12.12□□□□□ -0.47
HLA-DQB2-229ENST00000411527 PPIAL4AQ9Y536 164 aa12.12□□□□□ -0.47
HLA-DQB2-229ENST00000411527 PRSS23O95084 383 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms