RNA–Protein interactions for RNA: ENST00000411265.1

RNU6-1001P-201, Transcript of RNA, U6 small nuclear 1001, pseudogene, humanhuman

BASIC

Gene RNU6-1001P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1001P-201ENST00000411265 CTSFQ9UBX1 484 aa0.94□□□□□ -2.26
RNU6-1001P-201ENST00000411265 TET2Q6N021 2002 aaPredicted RBP0.94□□□□□ -2.26
RNU6-1001P-201ENST00000411265 NID2Q14112 1375 aa0.94□□□□□ -2.26
RNU6-1001P-201ENST00000411265 CEMIPQ8WUJ3 1361 aa0.94□□□□□ -2.26
RNU6-1001P-201ENST00000411265 TNKS1BP1Q9C0C2 1729 aaKnown RBP0.93□□□□□ -2.26
RNU6-1001P-201ENST00000411265 TRAV39A0A0B4J263 110 aa0.93□□□□□ -2.26
RNU6-1001P-201ENST00000411265 IGKV1D-13A0A0B4J2D9 117 aa0.93□□□□□ -2.26
RNU6-1001P-201ENST00000411265 C16orf90A8MZG2 172 aa0.93□□□□□ -2.26
RNU6-1001P-201ENST00000411265 RAMP3O60896 148 aa0.93□□□□□ -2.26
RNU6-1001P-201ENST00000411265 RP2O75695 350 aa0.93□□□□□ -2.26
RNU6-1001P-201ENST00000411265 IDH1O75874 414 aaKnown RBP0.93□□□□□ -2.26
RNU6-1001P-201ENST00000411265 FGF1P05230 155 aa0.93□□□□□ -2.26
RNU6-1001P-201ENST00000411265 IGKV1-13P0DP09 117 aa0.93□□□□□ -2.26
RNU6-1001P-201ENST00000411265 CALM1P0DP23 149 aa0.93□□□□□ -2.26
RNU6-1001P-201ENST00000411265 CALM2P0DP24 149 aa0.93□□□□□ -2.26
RNU6-1001P-201ENST00000411265 CALM3P0DP25 149 aa0.93□□□□□ -2.26
RNU6-1001P-201ENST00000411265 EPB41P11171 864 aaKnown RBP0.93□□□□□ -2.26
RNU6-1001P-201ENST00000411265 CHI3L1P36222 383 aaPredicted RBP0.93□□□□□ -2.26
RNU6-1001P-201ENST00000411265 YAP1P46937 504 aaKnown RBP0.93□□□□□ -2.26
RNU6-1001P-201ENST00000411265 PPT1P50897 306 aa0.93□□□□□ -2.26
RNU6-1001P-201ENST00000411265 CDH4P55283 916 aa0.93□□□□□ -2.26
RNU6-1001P-201ENST00000411265 IFT88Q13099 833 aa0.93□□□□□ -2.26
RNU6-1001P-201ENST00000411265 BAMBIQ13145 260 aa0.93□□□□□ -2.26
RNU6-1001P-201ENST00000411265 ARHGAP19Q14CB8 494 aa0.93□□□□□ -2.26
RNU6-1001P-201ENST00000411265 PON3Q15166 354 aa0.93□□□□□ -2.26
RNU6-1001P-201ENST00000411265 SLC36A3Q495N2 470 aa0.93□□□□□ -2.26
RNU6-1001P-201ENST00000411265 TTC23Q5W5X9 447 aa0.93□□□□□ -2.26
RNU6-1001P-201ENST00000411265 TRIM40Q6P9F5 258 aa0.93□□□□□ -2.26
RNU6-1001P-201ENST00000411265 CNSTQ6PJW8 725 aa0.93□□□□□ -2.26
RNU6-1001P-201ENST00000411265 KDM7AQ6ZMT4 941 aa0.93□□□□□ -2.26
RNU6-1001P-201ENST00000411265 TMEM135Q86UB9 458 aa0.93□□□□□ -2.26
RNU6-1001P-201ENST00000411265 PIANPQ8IYJ0 282 aa0.93□□□□□ -2.26
RNU6-1001P-201ENST00000411265 PRSS58Q8IYP2 241 aa0.93□□□□□ -2.26
RNU6-1001P-201ENST00000411265 CEP112Q8N8E3 955 aa0.93□□□□□ -2.26
RNU6-1001P-201ENST00000411265 ZNF557Q8N988 423 aaPredicted RBP0.93□□□□□ -2.26
RNU6-1001P-201ENST00000411265 FAM133AQ8N9E0 248 aa0.93□□□□□ -2.26
RNU6-1001P-201ENST00000411265 TMEM104Q8NE00 496 aa0.93□□□□□ -2.26
RNU6-1001P-201ENST00000411265 COQ8AQ8NI60 647 aa0.93□□□□□ -2.26
RNU6-1001P-201ENST00000411265 CREB3L1Q96BA8 519 aa0.93□□□□□ -2.26
RNU6-1001P-201ENST00000411265 SECISBP2Q96T21 854 aaKnown RBP0.93□□□□□ -2.26
RNU6-1001P-201ENST00000411265 ZSCAN5AQ9BUG6 496 aa0.93□□□□□ -2.26
RNU6-1001P-201ENST00000411265 SLC25A2Q9BXI2 301 aa0.93□□□□□ -2.26
RNU6-1001P-201ENST00000411265 FRMD8P1Q9BZ68 369 aaPredicted RBP0.93□□□□□ -2.26
RNU6-1001P-201ENST00000411265 SDAD1Q9NVU7 687 aaKnown RBP eCLIP0.93□□□□□ -2.26
RNU6-1001P-201ENST00000411265 ACTR3BQ9P1U1 418 aa0.93□□□□□ -2.26
RNU6-1001P-201ENST00000411265 ZNF230Q9UIE0 474 aaPredicted RBP0.93□□□□□ -2.26
RNU6-1001P-201ENST00000411265 POLDIP2Q9Y2S7 368 aa0.93□□□□□ -2.26
RNU6-1001P-201ENST00000411265 MEMO1Q9Y316 297 aa0.93□□□□□ -2.26
RNU6-1001P-201ENST00000411265 SIGLEC9Q9Y336 463 aa0.93□□□□□ -2.26
RNU6-1001P-201ENST00000411265 SHROOM3Q8TF72 1996 aa0.93□□□□□ -2.26
RNU6-1001P-201ENST00000411265 FRMPD3Q5JV73 1810 aa0.92□□□□□ -2.26
RNU6-1001P-201ENST00000411265 TRAV6A0A075B6T7 132 aa0.92□□□□□ -2.26
RNU6-1001P-201ENST00000411265 MBLAC1A4D2B0 266 aaPredicted RBP0.92□□□□□ -2.26
RNU6-1001P-201ENST00000411265 BPY2O14599 106 aa0.92□□□□□ -2.26
RNU6-1001P-201ENST00000411265 RAB3DO95716 219 aa0.92□□□□□ -2.26
RNU6-1001P-201ENST00000411265 IGHDP01880 384 aa0.92□□□□□ -2.26
RNU6-1001P-201ENST00000411265 APCSP02743 223 aa0.92□□□□□ -2.26
RNU6-1001P-201ENST00000411265 CD74P04233 296 aa0.92□□□□□ -2.26
RNU6-1001P-201ENST00000411265 GLAP06280 429 aa0.92□□□□□ -2.26
RNU6-1001P-201ENST00000411265 DCKP27707 260 aa0.92□□□□□ -2.26
RNU6-1001P-201ENST00000411265 CASP14P31944 242 aa0.92□□□□□ -2.26
RNU6-1001P-201ENST00000411265 CCR1P32246 355 aa0.92□□□□□ -2.26
RNU6-1001P-201ENST00000411265 SERPINB5P36952 375 aa0.92□□□□□ -2.26
RNU6-1001P-201ENST00000411265 HSD17B2P37059 387 aa0.92□□□□□ -2.26
RNU6-1001P-201ENST00000411265 FDFT1P37268 417 aa0.92□□□□□ -2.26
RNU6-1001P-201ENST00000411265 TNFSF9P41273 254 aa0.92□□□□□ -2.26
RNU6-1001P-201ENST00000411265 CXCL12P48061 93 aa0.92□□□□□ -2.26
RNU6-1001P-201ENST00000411265 SLC11A1P49279 550 aa0.92□□□□□ -2.26
RNU6-1001P-201ENST00000411265 RGS4P49798 205 aa0.92□□□□□ -2.26
RNU6-1001P-201ENST00000411265 CBX1P83916 185 aa0.92□□□□□ -2.26
RNU6-1001P-201ENST00000411265 OGDHQ02218 1023 aa0.92□□□□□ -2.26
RNU6-1001P-201ENST00000411265 ZNF616Q08AN1 781 aa0.92□□□□□ -2.26
RNU6-1001P-201ENST00000411265 MAB21L1Q13394 359 aa0.92□□□□□ -2.26
RNU6-1001P-201ENST00000411265 DGUOKQ16854 277 aa0.92□□□□□ -2.26
RNU6-1001P-201ENST00000411265 KRTAP6-3Q3LI67 103 aa0.92□□□□□ -2.26
RNU6-1001P-201ENST00000411265 USH1GQ495M9 461 aa0.92□□□□□ -2.26
RNU6-1001P-201ENST00000411265 PRMT9Q6P2P2 845 aa0.92□□□□□ -2.26
RNU6-1001P-201ENST00000411265 HDDC2Q7Z4H3 204 aa0.92□□□□□ -2.26
RNU6-1001P-201ENST00000411265 OAFQ86UD1 273 aa0.92□□□□□ -2.26
RNU6-1001P-201ENST00000411265 ANKFN1Q8N957 763 aa0.92□□□□□ -2.26
RNU6-1001P-201ENST00000411265 LINC01560Q8TB33 94 aa0.92□□□□□ -2.26
RNU6-1001P-201ENST00000411265 C15orf40Q8WUR7 153 aa0.92□□□□□ -2.26
RNU6-1001P-201ENST00000411265 NEURL3Q96EH8 262 aa0.92□□□□□ -2.26
RNU6-1001P-201ENST00000411265 MED8Q96G25 268 aa0.92□□□□□ -2.26
RNU6-1001P-201ENST00000411265 DNAJC1Q96KC8 554 aaKnown RBP0.92□□□□□ -2.26
RNU6-1001P-201ENST00000411265 HSFY1Q96LI6 401 aa0.92□□□□□ -2.26
RNU6-1001P-201ENST00000411265 TTC25Q96NG3 672 aa0.92□□□□□ -2.26
RNU6-1001P-201ENST00000411265 OR8B4Q96RC9 309 aa0.92□□□□□ -2.26
RNU6-1001P-201ENST00000411265 SORT1Q99523 831 aa0.92□□□□□ -2.26
RNU6-1001P-201ENST00000411265 TIMM29Q9BSF4 260 aa0.92□□□□□ -2.26
RNU6-1001P-201ENST00000411265 UBE2ZQ9H832 354 aaPredicted RBP0.92□□□□□ -2.26
RNU6-1001P-201ENST00000411265 UVRAGQ9P2Y5 699 aa0.92□□□□□ -2.26
RNU6-1001P-201ENST00000411265 ZNF391Q9UJN7 358 aa0.92□□□□□ -2.26
RNU6-1001P-201ENST00000411265 KIAA1257Q9ULG3 409 aa0.92□□□□□ -2.26
RNU6-1001P-201ENST00000411265 ODF2LQ9ULJ1 636 aa0.92□□□□□ -2.26
RNU6-1001P-201ENST00000411265 PSG8Q9UQ74 426 aa0.92□□□□□ -2.26
RNU6-1001P-201ENST00000411265 WDR62O43379 1518 aa0.92□□□□□ -2.26
RNU6-1001P-201ENST00000411265 MSH6P52701 1360 aa0.92□□□□□ -2.26
RNU6-1001P-201ENST00000411265 RPAP1Q9BWH6 1393 aaPredicted RBP0.92□□□□□ -2.26
RNU6-1001P-201ENST00000411265 KIF16BQ96L93 1317 aa0.91□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms