RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 ISL2Q96A47 359 aa7.75□□□□□ -1.17
SCN9A-203ENST00000409672 ZNF317Q96PQ6 595 aaPredicted RBP7.75□□□□□ -1.17
SCN9A-203ENST00000409672 RANBP9Q96S59 729 aa7.75□□□□□ -1.17
SCN9A-203ENST00000409672 KCNJ16Q9NPI9 418 aa7.75□□□□□ -1.17
SCN9A-203ENST00000409672 WSB2Q9NYS7 404 aaPredicted RBP7.75□□□□□ -1.17
SCN9A-203ENST00000409672 TAS2R8Q9NYW2 309 aa7.75□□□□□ -1.17
SCN9A-203ENST00000409672 STYXL1Q9Y6J8 313 aa7.75□□□□□ -1.17
SCN9A-203ENST00000409672 ENPP4Q9Y6X5 453 aa7.75□□□□□ -1.17
SCN9A-203ENST00000409672 NUP214P35658 2090 aaPredicted RBP7.75□□□□□ -1.17
SCN9A-203ENST00000409672 TRBV4-1A0A0J9YWV2 114 aa7.75□□□□□ -1.17
SCN9A-203ENST00000409672 FIGNL2A6NMB9 653 aa7.75□□□□□ -1.17
SCN9A-203ENST00000409672 BHLHE40O14503 412 aa7.75□□□□□ -1.17
SCN9A-203ENST00000409672 HRO43593 1189 aa7.75□□□□□ -1.17
SCN9A-203ENST00000409672 CDK4P11802 303 aa7.75□□□□□ -1.17
SCN9A-203ENST00000409672 MMP12P39900 470 aa7.75□□□□□ -1.17
SCN9A-203ENST00000409672 ZNF626Q68DY1 528 aa7.75□□□□□ -1.17
SCN9A-203ENST00000409672 ADGRG5Q8IZF4 528 aa7.75□□□□□ -1.17
SCN9A-203ENST00000409672 TMEM255BQ8WV15 326 aa7.75□□□□□ -1.17
SCN9A-203ENST00000409672 ZUFSPQ96AP4 578 aa7.75□□□□□ -1.17
SCN9A-203ENST00000409672 ELMOD3Q96FG2 381 aa7.75□□□□□ -1.17
SCN9A-203ENST00000409672 COA3Q9Y2R0 106 aaPredicted RBP7.75□□□□□ -1.17
SCN9A-203ENST00000409672 MEIKINA0A087WXM9 373 aa7.75□□□□□ -1.17
SCN9A-203ENST00000409672 ZCWPW2A0A1B0GU75 182 aa7.75□□□□□ -1.17
SCN9A-203ENST00000409672 ZC3H12DA2A288 527 aaKnown RBP7.75□□□□□ -1.17
SCN9A-203ENST00000409672 KCNK2O95069 426 aa7.75□□□□□ -1.17
SCN9A-203ENST00000409672 SMAD4Q13485 552 aaKnown RBP7.75□□□□□ -1.17
SCN9A-203ENST00000409672 MPEG1Q2M385 716 aa7.75□□□□□ -1.17
SCN9A-203ENST00000409672 COQ5Q5HYK3 327 aa7.75□□□□□ -1.17
SCN9A-203ENST00000409672 RNFT1Q5M7Z0 435 aa7.75□□□□□ -1.17
SCN9A-203ENST00000409672 WFDC3Q8IUB2 231 aa7.75□□□□□ -1.17
SCN9A-203ENST00000409672 BPIFB2Q8N4F0 458 aa7.75□□□□□ -1.17
SCN9A-203ENST00000409672 CPNE4Q96A23 557 aaPredicted RBP7.75□□□□□ -1.17
SCN9A-203ENST00000409672 SLC35A4Q96G79 324 aa7.75□□□□□ -1.17
SCN9A-203ENST00000409672 OR51E2Q9H255 320 aa7.75□□□□□ -1.17
SCN9A-203ENST00000409672 SLC39A9Q9NUM3 307 aa7.75□□□□□ -1.17
SCN9A-203ENST00000409672 DCAF16Q9NXF7 216 aa7.75□□□□□ -1.17
SCN9A-203ENST00000409672 KCNAB3O43448 404 aa7.75□□□□□ -1.17
SCN9A-203ENST00000409672 CPEP16870 476 aa7.75□□□□□ -1.17
SCN9A-203ENST00000409672 COX7A1P24310 79 aa7.75□□□□□ -1.17
SCN9A-203ENST00000409672 NUDT1P36639 197 aa7.75□□□□□ -1.17
SCN9A-203ENST00000409672 MFSD9Q8NBP5 474 aa7.75□□□□□ -1.17
SCN9A-203ENST00000409672 LTBP3Q9NS15 1303 aa7.75□□□□□ -1.17
SCN9A-203ENST00000409672 PIKFYVEQ9Y2I7 2098 aa7.75□□□□□ -1.17
SCN9A-203ENST00000409672 SRPX2O60687 465 aaPredicted RBP7.75□□□□□ -1.17
SCN9A-203ENST00000409672 TGM6O95932 706 aa7.75□□□□□ -1.17
SCN9A-203ENST00000409672 AADACP22760 399 aa7.75□□□□□ -1.17
SCN9A-203ENST00000409672 PRLHRP49683 370 aa7.75□□□□□ -1.17
SCN9A-203ENST00000409672 ZXDAP98168 799 aa7.75□□□□□ -1.17
SCN9A-203ENST00000409672 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.75□□□□□ -1.17
SCN9A-203ENST00000409672 TSPYL5Q86VY4 417 aaPredicted RBP7.75□□□□□ -1.17
SCN9A-203ENST00000409672 LIN7BQ9HAP6 207 aa7.75□□□□□ -1.17
SCN9A-203ENST00000409672 NTNG1Q9Y2I2 539 aa7.75□□□□□ -1.17
SCN9A-203ENST00000409672 DICER1Q9UPY3 1922 aaKnown RBP7.74□□□□□ -1.17
SCN9A-203ENST00000409672 A0A1W2PS29 197 aa7.74□□□□□ -1.17
SCN9A-203ENST00000409672 KRBOX1C9JBD0 128 aa7.74□□□□□ -1.17
SCN9A-203ENST00000409672 DNPH1O43598 174 aa7.74□□□□□ -1.17
SCN9A-203ENST00000409672 CRYAAP02489 173 aa7.74□□□□□ -1.17
SCN9A-203ENST00000409672 RHOBP62745 196 aa7.74□□□□□ -1.17
SCN9A-203ENST00000409672 FGFBP1Q14512 234 aa7.74□□□□□ -1.17
SCN9A-203ENST00000409672 MOGQ16653 247 aa7.74□□□□□ -1.17
SCN9A-203ENST00000409672 SERPINA11Q86U17 422 aa7.74□□□□□ -1.17
SCN9A-203ENST00000409672 PCNPQ8WW12 178 aaKnown RBP7.74□□□□□ -1.17
SCN9A-203ENST00000409672 MOB3AQ96BX8 217 aa7.74□□□□□ -1.17
SCN9A-203ENST00000409672 AKR1E2Q96JD6 320 aa7.74□□□□□ -1.17
SCN9A-203ENST00000409672 PTTG2Q9NZH5 202 aa7.74□□□□□ -1.17
SCN9A-203ENST00000409672 CGGBP1Q9UFW8 167 aaPredicted RBP7.74□□□□□ -1.17
SCN9A-203ENST00000409672 AUP1Q9Y679 476 aa7.74□□□□□ -1.17
SCN9A-203ENST00000409672 V9GYS6 101 aa7.74□□□□□ -1.17
SCN9A-203ENST00000409672 SLX4Q8IY92 1834 aa7.74□□□□□ -1.17
SCN9A-203ENST00000409672 RBP4P02753 201 aa7.74□□□□□ -1.17
SCN9A-203ENST00000409672 ZNF816Q0VGE8 651 aaPredicted RBP7.74□□□□□ -1.17
SCN9A-203ENST00000409672 HLA-BQ31612 363 aa7.74□□□□□ -1.17
SCN9A-203ENST00000409672 PRSS36Q5K4E3 855 aa7.74□□□□□ -1.17
SCN9A-203ENST00000409672 PRAMEF5Q5TYX0 476 aa7.74□□□□□ -1.17
SCN9A-203ENST00000409672 PRAMEF6Q5VXH4 476 aa7.74□□□□□ -1.17
SCN9A-203ENST00000409672 USP51Q70EK9 711 aa7.74□□□□□ -1.17
SCN9A-203ENST00000409672 CATSPERDQ86XM0 798 aa7.74□□□□□ -1.17
SCN9A-203ENST00000409672 SLCO4A1Q96BD0 722 aa7.74□□□□□ -1.17
SCN9A-203ENST00000409672 MISP3Q96FF7 219 aa7.74□□□□□ -1.17
SCN9A-203ENST00000409672 MBOAT4Q96T53 435 aa7.74□□□□□ -1.17
SCN9A-203ENST00000409672 COL3A1P02461 1466 aaPredicted RBP7.74□□□□□ -1.17
SCN9A-203ENST00000409672 C4BP0C0L5 1744 aa7.74□□□□□ -1.17
SCN9A-203ENST00000409672 FOLR1P15328 257 aa7.74□□□□□ -1.17
SCN9A-203ENST00000409672 WNT4P56705 351 aa7.74□□□□□ -1.17
SCN9A-203ENST00000409672 MRPL10Q7Z7H8 261 aaKnown RBP7.74□□□□□ -1.17
SCN9A-203ENST00000409672 OR11G2Q8NGC1 345 aa7.74□□□□□ -1.17
SCN9A-203ENST00000409672 ADAM19Q9H013 955 aa7.74□□□□□ -1.17
SCN9A-203ENST00000409672 N4BP2Q86UW6 1770 aaPredicted RBP7.74□□□□□ -1.17
SCN9A-203ENST00000409672 SERINC4A6NH21 518 aa7.74□□□□□ -1.17
SCN9A-203ENST00000409672 STMND1H3BQB6 276 aa7.74□□□□□ -1.17
SCN9A-203ENST00000409672 M0QYG6 137 aa7.74□□□□□ -1.17
SCN9A-203ENST00000409672 TNFRSF10AO00220 468 aa7.74□□□□□ -1.17
SCN9A-203ENST00000409672 SOCS7O14512 581 aa7.74□□□□□ -1.17
SCN9A-203ENST00000409672 SMAD7O15105 426 aaKnown RBP7.74□□□□□ -1.17
SCN9A-203ENST00000409672 QDPRP09417 244 aa7.74□□□□□ -1.17
SCN9A-203ENST00000409672 BTG2P78543 158 aa7.74□□□□□ -1.17
SCN9A-203ENST00000409672 PRDX1Q06830 199 aaKnown RBP7.74□□□□□ -1.17
SCN9A-203ENST00000409672 ZNF385BQ569K4 471 aa7.74□□□□□ -1.17
SCN9A-203ENST00000409672 Q56UQ5 140 aa7.74□□□□□ -1.17
SCN9A-203ENST00000409672 OR2G6Q5TZ20 316 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms