RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 TUBGCP6Q96RT7 1819 aa2.05□□□□□ -2.08
PMS1-203ENST00000409593 PEX11AO75192 247 aa2.05□□□□□ -2.08
PMS1-203ENST00000409593 HEXBP07686 556 aa2.05□□□□□ -2.08
PMS1-203ENST00000409593 NCK1P16333 377 aa2.05□□□□□ -2.08
PMS1-203ENST00000409593 PON3Q15166 354 aa2.05□□□□□ -2.08
PMS1-203ENST00000409593 COPS8Q99627 209 aa2.05□□□□□ -2.08
PMS1-203ENST00000409593 AP1M2Q9Y6Q5 423 aa2.05□□□□□ -2.08
PMS1-203ENST00000409593 IGHV3-74A0A0B4J1X5 117 aa2.04□□□□□ -2.08
PMS1-203ENST00000409593 A0A0B4J2A0 478 aa2.04□□□□□ -2.08
PMS1-203ENST00000409593 TMEM223A0PJW6 202 aa2.04□□□□□ -2.08
PMS1-203ENST00000409593 ZNF233A6NK53 670 aa2.04□□□□□ -2.08
PMS1-203ENST00000409593 HIDE1A8MVS5 230 aa2.04□□□□□ -2.08
PMS1-203ENST00000409593 SGK1O00141 431 aa2.04□□□□□ -2.08
PMS1-203ENST00000409593 ATP5C1P36542 298 aaKnown RBP2.04□□□□□ -2.08
PMS1-203ENST00000409593 CX3CR1P49238 355 aa2.04□□□□□ -2.08
PMS1-203ENST00000409593 FGL1Q08830 312 aa2.04□□□□□ -2.08
PMS1-203ENST00000409593 POU2AF1Q16633 256 aa2.04□□□□□ -2.08
PMS1-203ENST00000409593 DGUOKQ16854 277 aa2.04□□□□□ -2.08
PMS1-203ENST00000409593 Q6ZPB1 254 aaPredicted RBP2.04□□□□□ -2.08
PMS1-203ENST00000409593 TMEM179Q6ZVK1 233 aa2.04□□□□□ -2.08
PMS1-203ENST00000409593 WDR86Q86TI4 376 aa2.04□□□□□ -2.08
PMS1-203ENST00000409593 OR2G2Q8NGZ5 317 aa2.04□□□□□ -2.08
PMS1-203ENST00000409593 FAM110BQ8TC76 370 aa2.04□□□□□ -2.08
PMS1-203ENST00000409593 MTMR9Q96QG7 549 aa2.04□□□□□ -2.08
PMS1-203ENST00000409593 ZNF382Q96SR6 550 aa2.04□□□□□ -2.08
PMS1-203ENST00000409593 CCT7Q99832 543 aa2.04□□□□□ -2.08
PMS1-203ENST00000409593 PPA2Q9H2U2 334 aa2.04□□□□□ -2.08
PMS1-203ENST00000409593 HMG20AQ9NP66 347 aa2.04□□□□□ -2.08
PMS1-203ENST00000409593 GPATCH2LQ9NWQ4 482 aa2.04□□□□□ -2.08
PMS1-203ENST00000409593 SHPKQ9UHJ6 478 aa2.04□□□□□ -2.08
PMS1-203ENST00000409593 PTBP2Q9UKA9 531 aaKnown RBP2.04□□□□□ -2.08
PMS1-203ENST00000409593 N6AMT1Q9Y5N5 214 aa2.04□□□□□ -2.08
PMS1-203ENST00000409593 CENPJQ9HC77 1338 aaPredicted RBP2.04□□□□□ -2.08
PMS1-203ENST00000409593 IGLV3-12A0A075B6K2 115 aa2.03□□□□□ -2.08
PMS1-203ENST00000409593 GOLGA8SH3BPF8 625 aa2.03□□□□□ -2.08
PMS1-203ENST00000409593 FGF1P05230 155 aa2.03□□□□□ -2.08
PMS1-203ENST00000409593 FDFT1P37268 417 aa2.03□□□□□ -2.08
PMS1-203ENST00000409593 GRIA1P42261 906 aa2.03□□□□□ -2.08
PMS1-203ENST00000409593 RORCP51449 518 aa2.03□□□□□ -2.08
PMS1-203ENST00000409593 FAM78AQ5JUQ0 283 aa2.03□□□□□ -2.08
PMS1-203ENST00000409593 ABHD13Q7L211 337 aa2.03□□□□□ -2.08
PMS1-203ENST00000409593 CEP112Q8N8E3 955 aa2.03□□□□□ -2.08
PMS1-203ENST00000409593 OR5D13Q8NGL4 314 aa2.03□□□□□ -2.08
PMS1-203ENST00000409593 L3HYPDHQ96EM0 354 aa2.03□□□□□ -2.08
PMS1-203ENST00000409593 FAIM2Q9BWQ8 316 aa2.03□□□□□ -2.08
PMS1-203ENST00000409593 PARD6BQ9BYG5 372 aa2.03□□□□□ -2.08
PMS1-203ENST00000409593 MRPL37Q9BZE1 423 aaKnown RBP2.03□□□□□ -2.08
PMS1-203ENST00000409593 ISYNA1Q9NPH2 558 aa2.03□□□□□ -2.08
PMS1-203ENST00000409593 ZNF726A6NNF4 738 aa2.02□□□□□ -2.09
PMS1-203ENST00000409593 FCMRO60667 390 aa2.02□□□□□ -2.09
PMS1-203ENST00000409593 NOL3O60936 208 aaKnown RBP2.02□□□□□ -2.09
PMS1-203ENST00000409593 OR7A10O76100 309 aa2.02□□□□□ -2.09
PMS1-203ENST00000409593 CLDN9O95484 217 aa2.02□□□□□ -2.09
PMS1-203ENST00000409593 BCHEP06276 602 aa2.02□□□□□ -2.09
PMS1-203ENST00000409593 DBTP11182 482 aaKnown RBP2.02□□□□□ -2.09
PMS1-203ENST00000409593 HSD17B2P37059 387 aa2.02□□□□□ -2.09
PMS1-203ENST00000409593 CSNK1A1P48729 337 aa2.02□□□□□ -2.09
PMS1-203ENST00000409593 CCT3P49368 545 aaKnown RBP2.02□□□□□ -2.09
PMS1-203ENST00000409593 UGT2B15P54855 530 aa2.02□□□□□ -2.09
PMS1-203ENST00000409593 PITPNAQ00169 270 aa2.02□□□□□ -2.09
PMS1-203ENST00000409593 SF3A2Q15428 464 aaKnown RBP2.02□□□□□ -2.09
PMS1-203ENST00000409593 KCTD21Q4G0X4 260 aa2.02□□□□□ -2.09
PMS1-203ENST00000409593 PEX26Q7Z412 305 aa2.02□□□□□ -2.09
PMS1-203ENST00000409593 DHDDSQ86SQ9 333 aa2.02□□□□□ -2.09
PMS1-203ENST00000409593 C10orf35Q96D05 121 aa2.02□□□□□ -2.09
PMS1-203ENST00000409593 NEURL3Q96EH8 262 aa2.02□□□□□ -2.09
PMS1-203ENST00000409593 RNF157Q96PX1 679 aa2.02□□□□□ -2.09
PMS1-203ENST00000409593 KCTD14Q9BQ13 255 aaPredicted RBP2.02□□□□□ -2.09
PMS1-203ENST00000409593 COL27A1Q8IZC6 1860 aaPredicted RBP2.02□□□□□ -2.09
PMS1-203ENST00000409593 WDR62O43379 1518 aa2.02□□□□□ -2.09
PMS1-203ENST00000409593 YEATS2Q9ULM3 1422 aa2.02□□□□□ -2.09
PMS1-203ENST00000409593 ANGPT2O15123 496 aa2.02□□□□□ -2.09
PMS1-203ENST00000409593 ERLIN2O94905 339 aa2.02□□□□□ -2.09
PMS1-203ENST00000409593 IGHV2-5P01817 119 aa2.02□□□□□ -2.09
PMS1-203ENST00000409593 OR56A5P0C7T3 313 aa2.02□□□□□ -2.09
PMS1-203ENST00000409593 CALM1P0DP23 149 aa2.02□□□□□ -2.09
PMS1-203ENST00000409593 CALM2P0DP24 149 aa2.02□□□□□ -2.09
PMS1-203ENST00000409593 CALM3P0DP25 149 aa2.02□□□□□ -2.09
PMS1-203ENST00000409593 YAP1P46937 504 aaKnown RBP2.02□□□□□ -2.09
PMS1-203ENST00000409593 ARG2P78540 354 aa2.02□□□□□ -2.09
PMS1-203ENST00000409593 ZNF92Q03936 586 aa2.02□□□□□ -2.09
PMS1-203ENST00000409593 MRPL28Q13084 256 aaKnown RBP2.02□□□□□ -2.09
PMS1-203ENST00000409593 ARHGAP19Q14CB8 494 aa2.02□□□□□ -2.09
PMS1-203ENST00000409593 RABL6Q3YEC7 729 aaPredicted RBP2.02□□□□□ -2.09
PMS1-203ENST00000409593 PHYHD1Q5SRE7 291 aa2.02□□□□□ -2.09
PMS1-203ENST00000409593 DUX4L9Q6RFH8 374 aaPredicted RBP2.02□□□□□ -2.09
PMS1-203ENST00000409593 UQCC3Q6UW78 93 aa2.02□□□□□ -2.09
PMS1-203ENST00000409593 NTM-AS1Q6ZSK4 140 aa2.02□□□□□ -2.09
PMS1-203ENST00000409593 OAFQ86UD1 273 aa2.02□□□□□ -2.09
PMS1-203ENST00000409593 OR4S2Q8NH73 311 aa2.02□□□□□ -2.09
PMS1-203ENST00000409593 RNF139Q8WU17 664 aa2.02□□□□□ -2.09
PMS1-203ENST00000409593 FAM3DQ96BQ1 224 aa2.02□□□□□ -2.09
PMS1-203ENST00000409593 PANX2Q96RD6 677 aa2.02□□□□□ -2.09
PMS1-203ENST00000409593 AZI2Q9H6S1 392 aa2.02□□□□□ -2.09
PMS1-203ENST00000409593 RPF2Q9H7B2 306 aaKnown RBP2.02□□□□□ -2.09
PMS1-203ENST00000409593 NMRAL1Q9HBL8 299 aa2.02□□□□□ -2.09
PMS1-203ENST00000409593 ADAM28Q9UKQ2 775 aa2.02□□□□□ -2.09
PMS1-203ENST00000409593 CDH9Q9ULB4 789 aa2.02□□□□□ -2.09
PMS1-203ENST00000409593 MRPS18BQ9Y676 258 aaKnown RBP2.02□□□□□ -2.09
PMS1-203ENST00000409593 CCNKO75909 580 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms