RNA–Protein interactions for RNA: ENST00000409219.5

CHRNA1-203, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 3 BASIC

Gene CHRNA1, Length 1,466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-203ENST00000409219 ZNF12P17014 697 aa10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 MAKP20794 623 aa10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 UQCRC2P22695 453 aa10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 RPS5P46782 204 aaKnown RBP10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 RPL14P50914 215 aaKnown RBP10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 KRTAP10-3P60369 221 aa10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 EGR4Q05215 589 aa10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 CARD17Q5XLA6 110 aa10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 ASPHD2Q6ICH7 369 aa10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 JAZF1Q86VZ6 243 aa10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 ANKRD46Q86W74 232 aa10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 ZNF440Q8IYI8 595 aa10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 ZNF781Q8N8C0 355 aa10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 AGR3Q8TD06 166 aa10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 STK35Q8TDR2 534 aa10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 NEURL3Q96EH8 262 aa10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 TRNT1Q96Q11 434 aaKnown RBP10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 OR51B6Q9H340 312 aa10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 DENND2DQ9H6A0 471 aaPredicted RBP10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 BEX1Q9HBH7 125 aa10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 DECR2Q9NUI1 292 aa10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 TAGLN3Q9UI15 199 aa10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 GPR160Q9UJ42 338 aa10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 MDFIC2A0A1B0GVS7 189 aa10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 CDHR4A6H8M9 788 aa10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 HDAC3O15379 428 aa10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 GSC2O15499 205 aa10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 AKAP8O43823 692 aaKnown RBP10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 TSPAN15O95858 294 aa10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 IGHMP01871 453 aa10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 IGHV4-38-2P0DP08 117 aa10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 PRG2P13727 222 aa10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 GTF2E2P29084 291 aaKnown RBP10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 RAG2P55895 527 aa10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 CLDN8P56748 225 aa10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 RELBQ01201 579 aa10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 C1DQ13901 141 aaKnown RBP10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 GNA13Q14344 377 aa10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 TSTQ16762 297 aaKnown RBP10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 OLFML2AQ68BL7 652 aa10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 ZNF836Q6ZNA1 936 aa10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 LRRC74BQ6ZQY2 392 aa10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 C20orf196Q8IYI0 205 aa10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 KIRREL3Q8IZU9 778 aa10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 PAQR4Q8N4S7 273 aaPredicted RBP10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 BHLHE22Q8NFJ8 381 aaPredicted RBP10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 FGFBP3Q8TAT2 258 aa10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 SYNPRQ8TBG9 265 aa10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 CCL17Q92583 94 aa10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 ELMOD3Q96FG2 381 aa10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 CADM1Q9BY67 442 aaKnown RBP10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 C1orf21Q9H246 121 aa10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 SLCO1C1Q9NYB5 712 aa10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 TAS2R1Q9NYW7 299 aa10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 POLR3KQ9Y2Y1 108 aaPredicted RBP10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 INSIG2Q9Y5U4 225 aa10.87□□□□□ -0.67
CHRNA1-203ENST00000409219 IGHV3OR16-10A0A075B7F0 116 aa10.86□□□□□ -0.67
CHRNA1-203ENST00000409219 SLC22A23A1A5C7 686 aa10.86□□□□□ -0.67
CHRNA1-203ENST00000409219 FAM181BA6NEQ2 426 aa10.86□□□□□ -0.67
CHRNA1-203ENST00000409219 M0R082 166 aa10.86□□□□□ -0.67
CHRNA1-203ENST00000409219 HOXA3O43365 443 aaPredicted RBP10.86□□□□□ -0.67
CHRNA1-203ENST00000409219 UBL3O95164 117 aa10.86□□□□□ -0.67
CHRNA1-203ENST00000409219 CPSF4O95639 269 aaKnown RBP10.86□□□□□ -0.67
CHRNA1-203ENST00000409219 DBIP07108 87 aaKnown RBP10.86□□□□□ -0.67
CHRNA1-203ENST00000409219 PATE4P0C8F1 98 aa10.86□□□□□ -0.67
CHRNA1-203ENST00000409219 OR8G3PP0DMU2 310 aa10.86□□□□□ -0.67
CHRNA1-203ENST00000409219 PRDX6P30041 224 aa10.86□□□□□ -0.67
CHRNA1-203ENST00000409219 MTNR1AP48039 350 aa10.86□□□□□ -0.67
CHRNA1-203ENST00000409219 SELENOVP59797 346 aa10.86□□□□□ -0.67
CHRNA1-203ENST00000409219 SEC61A1P61619 476 aaKnown RBP10.86□□□□□ -0.67
CHRNA1-203ENST00000409219 COPZ1P61923 177 aa10.86□□□□□ -0.67
CHRNA1-203ENST00000409219 GLO1Q04760 184 aa10.86□□□□□ -0.67
CHRNA1-203ENST00000409219 HNRNPA0Q13151 305 aaKnown RBP10.86□□□□□ -0.67
CHRNA1-203ENST00000409219 ZNF362Q5T0B9 420 aaPredicted RBP10.86□□□□□ -0.67
CHRNA1-203ENST00000409219 C9orf139Q6ZV77 190 aa10.86□□□□□ -0.67
CHRNA1-203ENST00000409219 RNF130Q86XS8 419 aa10.86□□□□□ -0.67
CHRNA1-203ENST00000409219 VRK2Q86Y07 508 aa10.86□□□□□ -0.67
CHRNA1-203ENST00000409219 PARP8Q8N3A8 854 aa10.86□□□□□ -0.67
CHRNA1-203ENST00000409219 OR8J2Q8NGG1 315 aa10.86□□□□□ -0.67
CHRNA1-203ENST00000409219 OR4F5Q8NH21 305 aa10.86□□□□□ -0.67
CHRNA1-203ENST00000409219 ZNF417Q8TAU3 575 aa10.86□□□□□ -0.67
CHRNA1-203ENST00000409219 KTI12Q96EK9 354 aaPredicted RBP10.86□□□□□ -0.67
CHRNA1-203ENST00000409219 ZNF587Q96SQ5 575 aaPredicted RBP10.86□□□□□ -0.67
CHRNA1-203ENST00000409219 FOXB1Q99853 325 aa10.86□□□□□ -0.67
CHRNA1-203ENST00000409219 SLC35A5Q9BS91 424 aa10.86□□□□□ -0.67
CHRNA1-203ENST00000409219 EMC6Q9BV81 110 aa10.86□□□□□ -0.67
CHRNA1-203ENST00000409219 DPY30Q9C005 99 aa10.86□□□□□ -0.67
CHRNA1-203ENST00000409219 FBXL3Q9UKT7 428 aa10.86□□□□□ -0.67
CHRNA1-203ENST00000409219 AIM2O14862 343 aa10.85□□□□□ -0.67
CHRNA1-203ENST00000409219 SLC22A2O15244 555 aa10.85□□□□□ -0.67
CHRNA1-203ENST00000409219 GYG2O15488 501 aa10.85□□□□□ -0.67
CHRNA1-203ENST00000409219 SERPINA5P05154 406 aa10.85□□□□□ -0.67
CHRNA1-203ENST00000409219 CCL2P13500 99 aa10.85□□□□□ -0.67
CHRNA1-203ENST00000409219 CHI3L1P36222 383 aaPredicted RBP10.85□□□□□ -0.67
CHRNA1-203ENST00000409219 MNAT1P51948 309 aa10.85□□□□□ -0.67
CHRNA1-203ENST00000409219 RBBP4Q09028 425 aa10.85□□□□□ -0.67
CHRNA1-203ENST00000409219 CAMK2DQ13557 499 aa10.85□□□□□ -0.67
CHRNA1-203ENST00000409219 FAM209AQ5JX71 171 aa10.85□□□□□ -0.67
CHRNA1-203ENST00000409219 Q6ZPA2 131 aa10.85□□□□□ -0.67
CHRNA1-203ENST00000409219 ARHGAP24Q8N264 748 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms