RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 RNF121Q9H920 327 aa7.87□□□□□ -1.15
SNORD88A-201ENST00000408314 KRCC1Q9NPI7 259 aaPredicted RBP7.87□□□□□ -1.15
SNORD88A-201ENST00000408314 TMEM38BQ9NVV0 291 aa7.87□□□□□ -1.15
SNORD88A-201ENST00000408314 TMEM160Q9NX00 188 aa7.87□□□□□ -1.15
SNORD88A-201ENST00000408314 B3GNT2Q9NY97 397 aa7.87□□□□□ -1.15
SNORD88A-201ENST00000408314 TAS2R5Q9NYW4 299 aa7.87□□□□□ -1.15
SNORD88A-201ENST00000408314 CDC42EP3Q9UKI2 254 aa7.87□□□□□ -1.15
SNORD88A-201ENST00000408314 ZNF346Q9UL40 294 aaKnown RBP7.87□□□□□ -1.15
SNORD88A-201ENST00000408314 ABCA1O95477 2261 aa7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 M0R233 179 aa7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 MT-ND5P03915 603 aa7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 THY1P04216 161 aa7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 SERPINA5P05154 406 aa7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 CELA3BP08861 270 aa7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 QDPRP09417 244 aa7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 COX4I1P13073 169 aa7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 ZNF14P17017 642 aaPredicted RBP7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 HNF1AP20823 631 aa7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 THBS4P35443 961 aa7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 NR4A2P43354 598 aa7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 SLC9A3P48764 834 aa7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 CRYBA2P53672 197 aa7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 LSM11P83369 360 aaKnown RBP eCLIP7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 HGFACQ04756 655 aa7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 RPL18Q07020 188 aaKnown RBP7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 KRTAP1-1Q07627 177 aa7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 PIN1Q13526 163 aaPredicted RBP7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 MELKQ14680 651 aa7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 TRAM2Q15035 370 aa7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 CARTPTQ16568 116 aa7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 MOGQ16653 247 aa7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 TBC1D28Q2M2D7 210 aa7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 IQCCQ4KMZ1 466 aa7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 IFI44LQ53G44 452 aa7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 PHYHD1Q5SRE7 291 aa7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 C6orf52Q5T4I8 152 aa7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 CYB5R2Q6BCY4 276 aa7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 KRT80Q6KB66 452 aa7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 PODNL1Q6PEZ8 512 aa7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 NHLRC1Q6VVB1 395 aa7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 SLC16A14Q7RTX9 510 aa7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 C1orf174Q8IYL3 243 aa7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 RNF113BQ8IZP6 322 aaKnown RBP7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 SVOPLQ8N434 492 aa7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 MAPK1IP1LQ8NDC0 245 aa7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 TMEM255BQ8WV15 326 aa7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 SNX33Q8WV41 574 aa7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 MRPL24Q96A35 216 aaKnown RBP7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 RBP7Q96R05 134 aa7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 ALG12Q9BV10 488 aa7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 ANKRD19PQ9H560 264 aa7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 CDH20Q9HBT6 801 aa7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 MEPEQ9NQ76 525 aaPredicted RBP7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 ZNF446Q9NWS9 450 aa7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 ARMCX1Q9P291 453 aa7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 RPS6KA6Q9UK32 745 aa7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 TMEM5Q9Y2B1 443 aa7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 ARFGEF3Q5TH69 2177 aa7.86□□□□□ -1.15
SNORD88A-201ENST00000408314 A0A1W2PPW3 197 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 A6NIZ1 184 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 CXCR6O00574 342 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 SNAP29O95721 258 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 ZNF682O95780 498 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 F13BP05160 661 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 SAGP10523 405 aaPredicted RBP7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 IFI30P13284 250 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 ZNF35P13682 527 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 APEHP13798 732 aaKnown RBP7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 DAOP14920 347 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 ACADSP16219 412 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 PCMT1P22061 227 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 PRDX6P30041 224 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 RAD52P43351 418 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 OR1E2P47887 323 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 NUDT2P50583 147 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 SLC7A2P52569 658 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 CHN2P52757 468 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 UGT2B15P54855 530 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 RAP1BP61224 184 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 RAP1AP62834 184 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 MRPS34P82930 218 aaKnown RBP7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 HSF2Q03933 536 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 LIPEQ05469 1076 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 PIGFQ07326 219 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 CD47Q08722 323 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 GGTLC2Q14390 218 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 MST1LQ2TV78 715 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 ALG10Q5BKT4 473 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 C10orf128Q5T292 105 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 FAM166AQ6J272 317 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 FKBP9P1Q75LS8 142 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 HIPK1Q86Z02 1210 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 NKAIN4Q8IVV8 208 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 LRRC17Q8N6Y2 441 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 POU5F2Q8N7G0 328 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 RBM15BQ8NDT2 890 aaKnown RBP7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 SLC30A7Q8NEW0 376 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 OR4K5Q8NGD3 323 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 PFN4Q8NHR9 129 aa7.85□□□□□ -1.15
SNORD88A-201ENST00000408314 ASB10Q8WXI3 467 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms