RNA–Protein interactions for RNA: ENST00000407422.7

SMARCB1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMARCB1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-204ENST00000407422 IGHV4-31P0DP07 118 aa16.63■□□□□ 0.25
SMARCB1-204ENST00000407422 NR4A2P43354 598 aa16.63■□□□□ 0.25
SMARCB1-204ENST00000407422 LSM11P83369 360 aaKnown RBP eCLIP16.63■□□□□ 0.25
SMARCB1-204ENST00000407422 MYBPC1Q00872 1141 aa16.63■□□□□ 0.25
SMARCB1-204ENST00000407422 SYT14Q8NB59 555 aa16.63■□□□□ 0.25
SMARCB1-204ENST00000407422 MOSPD2Q8NHP6 518 aa16.63■□□□□ 0.25
SMARCB1-204ENST00000407422 PIMREGQ9BSJ6 248 aa16.63■□□□□ 0.25
SMARCB1-204ENST00000407422 RAB1BQ9H0U4 201 aa16.63■□□□□ 0.25
SMARCB1-204ENST00000407422 CMAHPQ9Y471 501 aa16.63■□□□□ 0.25
SMARCB1-204ENST00000407422 LOC390937A0A1W2PQ73 354 aa16.63■□□□□ 0.25
SMARCB1-204ENST00000407422 A0A1W2PRG6 482 aa16.63■□□□□ 0.25
SMARCB1-204ENST00000407422 NDUFS8O00217 210 aa16.63■□□□□ 0.25
SMARCB1-204ENST00000407422 IGHG1P01857 330 aa16.63■□□□□ 0.25
SMARCB1-204ENST00000407422 OR8G3PP0DMU2 310 aa16.63■□□□□ 0.25
SMARCB1-204ENST00000407422 MDH1P40925 334 aaKnown RBP16.63■□□□□ 0.25
SMARCB1-204ENST00000407422 CLRN1P58418 232 aa16.63■□□□□ 0.25
SMARCB1-204ENST00000407422 SELENOWP63302 87 aa16.63■□□□□ 0.25
SMARCB1-204ENST00000407422 HIST3H3Q16695 136 aa16.63■□□□□ 0.25
SMARCB1-204ENST00000407422 VTCN1Q7Z7D3 282 aa16.63■□□□□ 0.25
SMARCB1-204ENST00000407422 SLC15A3Q8IY34 581 aa16.63■□□□□ 0.25
SMARCB1-204ENST00000407422 RP9Q8TA86 221 aaKnown RBP16.63■□□□□ 0.25
SMARCB1-204ENST00000407422 ASB10Q8WXI3 467 aa16.63■□□□□ 0.25
SMARCB1-204ENST00000407422 MCHR2Q969V1 340 aa16.63■□□□□ 0.25
SMARCB1-204ENST00000407422 MRPL13Q9BYD1 178 aaKnown RBP16.63■□□□□ 0.25
SMARCB1-204ENST00000407422 MRPL37Q9BZE1 423 aaKnown RBP16.63■□□□□ 0.25
SMARCB1-204ENST00000407422 DENND2DQ9H6A0 471 aaPredicted RBP16.63■□□□□ 0.25
SMARCB1-204ENST00000407422 A4GNTQ9UNA3 340 aa16.63■□□□□ 0.25
SMARCB1-204ENST00000407422 MED31Q9Y3C7 131 aa16.63■□□□□ 0.25
SMARCB1-204ENST00000407422 SNX13Q9Y5W8 968 aa16.63■□□□□ 0.25
SMARCB1-204ENST00000407422 IGHV4-61A0A0C4DH41 118 aa16.62■□□□□ 0.25
SMARCB1-204ENST00000407422 IGF2P01344 180 aa16.62■□□□□ 0.25
SMARCB1-204ENST00000407422 ADRA2AP08913 450 aa16.62■□□□□ 0.25
SMARCB1-204ENST00000407422 TSPAN19P0C672 248 aa16.62■□□□□ 0.25
SMARCB1-204ENST00000407422 THRBP10828 461 aa16.62■□□□□ 0.25
SMARCB1-204ENST00000407422 COX4I1P13073 169 aa16.62■□□□□ 0.25
SMARCB1-204ENST00000407422 YAP1P46937 504 aaKnown RBP16.62■□□□□ 0.25
SMARCB1-204ENST00000407422 LAPTM4AQ15012 233 aa16.62■□□□□ 0.25
SMARCB1-204ENST00000407422 CYB5R2Q6BCY4 276 aa16.62■□□□□ 0.25
SMARCB1-204ENST00000407422 OR4K5Q8NGD3 323 aa16.62■□□□□ 0.25
SMARCB1-204ENST00000407422 LIPHQ8WWY8 451 aa16.62■□□□□ 0.25
SMARCB1-204ENST00000407422 SEPHS2Q99611 448 aa16.62■□□□□ 0.25
SMARCB1-204ENST00000407422 DYNLRB1Q9NP97 96 aa16.62■□□□□ 0.25
SMARCB1-204ENST00000407422 INIPQ9NRY2 104 aa16.62■□□□□ 0.25
SMARCB1-204ENST00000407422 MCIDASD6RGH6 385 aa16.61■□□□□ 0.25
SMARCB1-204ENST00000407422 TRMUO75648 421 aaKnown RBP16.61■□□□□ 0.25
SMARCB1-204ENST00000407422 SERPINA5P05154 406 aa16.61■□□□□ 0.25
SMARCB1-204ENST00000407422 DAOP14920 347 aa16.61■□□□□ 0.25
SMARCB1-204ENST00000407422 ZNF16P17020 682 aaPredicted RBP16.61■□□□□ 0.25
SMARCB1-204ENST00000407422 LIPEQ05469 1076 aa16.61■□□□□ 0.25
SMARCB1-204ENST00000407422 TREML1Q86YW5 311 aa16.61■□□□□ 0.25
SMARCB1-204ENST00000407422 NOXO1Q8NFA2 376 aa16.61■□□□□ 0.25
SMARCB1-204ENST00000407422 MRPL24Q96A35 216 aaKnown RBP16.61■□□□□ 0.25
SMARCB1-204ENST00000407422 SYT3Q9BQG1 590 aa16.61■□□□□ 0.25
SMARCB1-204ENST00000407422 BPESC1Q9GZL8 116 aa16.61■□□□□ 0.25
SMARCB1-204ENST00000407422 MYOZ1Q9NP98 299 aaPredicted RBP16.61■□□□□ 0.25
SMARCB1-204ENST00000407422 RHCGQ9UBD6 479 aa16.61■□□□□ 0.25
SMARCB1-204ENST00000407422 FBXO9Q9UK97 447 aaPredicted RBP16.61■□□□□ 0.25
SMARCB1-204ENST00000407422 FZR1Q9UM11 496 aa16.61■□□□□ 0.25
SMARCB1-204ENST00000407422 SPEF1Q9Y4P9 236 aa16.61■□□□□ 0.25
SMARCB1-204ENST00000407422 ACADSP16219 412 aa16.6■□□□□ 0.25
SMARCB1-204ENST00000407422 GLRXP35754 106 aa16.6■□□□□ 0.25
SMARCB1-204ENST00000407422 GALK2Q01415 458 aa16.6■□□□□ 0.25
SMARCB1-204ENST00000407422 FXNQ16595 210 aa16.6■□□□□ 0.25
SMARCB1-204ENST00000407422 ARMC4Q5T2S8 1044 aa16.6■□□□□ 0.25
SMARCB1-204ENST00000407422 GKAP1Q5VSY0 366 aaPredicted RBP16.6■□□□□ 0.25
SMARCB1-204ENST00000407422 LRP11Q86VZ4 500 aa16.6■□□□□ 0.25
SMARCB1-204ENST00000407422 MEX3DQ86XN8 651 aaKnown RBP16.6■□□□□ 0.25
SMARCB1-204ENST00000407422 PAQR4Q8N4S7 273 aaPredicted RBP16.6■□□□□ 0.25
SMARCB1-204ENST00000407422 PRRC1Q96M27 445 aa16.6■□□□□ 0.25
SMARCB1-204ENST00000407422 KCNK17Q96T54 332 aa16.6■□□□□ 0.25
SMARCB1-204ENST00000407422 TPK1Q9H3S4 243 aa16.6■□□□□ 0.25
SMARCB1-204ENST00000407422 MED4Q9NPJ6 270 aa16.6■□□□□ 0.25
SMARCB1-204ENST00000407422 J3KTA2 159 aa16.59■□□□□ 0.25
SMARCB1-204ENST00000407422 NME4O00746 187 aa16.59■□□□□ 0.25
SMARCB1-204ENST00000407422 FARS2O95363 451 aaKnown RBP16.59■□□□□ 0.25
SMARCB1-204ENST00000407422 STAMBPO95630 424 aa16.59■□□□□ 0.25
SMARCB1-204ENST00000407422 CCL2P13500 99 aa16.59■□□□□ 0.25
SMARCB1-204ENST00000407422 DAP3P51398 398 aaKnown RBP16.59■□□□□ 0.25
SMARCB1-204ENST00000407422 SLC7A2P52569 658 aa16.59■□□□□ 0.25
SMARCB1-204ENST00000407422 ST3GAL3Q11203 375 aa16.59■□□□□ 0.25
SMARCB1-204ENST00000407422 CHRFAM7AQ494W8 412 aa16.59■□□□□ 0.25
SMARCB1-204ENST00000407422 IQCCQ4KMZ1 466 aa16.59■□□□□ 0.25
SMARCB1-204ENST00000407422 ARPINQ7Z6K5 226 aa16.59■□□□□ 0.25
SMARCB1-204ENST00000407422 NEU4Q8WWR8 484 aaPredicted RBP16.59■□□□□ 0.25
SMARCB1-204ENST00000407422 MAN2C1Q9NTJ4 1040 aa16.59■□□□□ 0.25
SMARCB1-204ENST00000407422 MYEF2Q9P2K5 600 aaKnown RBP16.59■□□□□ 0.25
SMARCB1-204ENST00000407422 FBXL3Q9UKT7 428 aa16.59■□□□□ 0.25
SMARCB1-204ENST00000407422 CXCR6O00574 342 aa16.59■□□□□ 0.25
SMARCB1-204ENST00000407422 FFAR1O14842 300 aa16.59■□□□□ 0.25
SMARCB1-204ENST00000407422 CCDC22O60826 627 aa16.59■□□□□ 0.25
SMARCB1-204ENST00000407422 SLC2A10O95528 541 aa16.59■□□□□ 0.25
SMARCB1-204ENST00000407422 IFI30P13284 250 aa16.59■□□□□ 0.25
SMARCB1-204ENST00000407422 EVX1P49640 407 aa16.59■□□□□ 0.25
SMARCB1-204ENST00000407422 C8orf82Q6P1X6 216 aaPredicted RBP16.59■□□□□ 0.25
SMARCB1-204ENST00000407422 SLC16A14Q7RTX9 510 aa16.59■□□□□ 0.25
SMARCB1-204ENST00000407422 SLC30A7Q8NEW0 376 aa16.59■□□□□ 0.25
SMARCB1-204ENST00000407422 LZICQ8WZA0 190 aa16.59■□□□□ 0.25
SMARCB1-204ENST00000407422 HDAC2Q92769 488 aaKnown RBP16.59■□□□□ 0.25
SMARCB1-204ENST00000407422 BPIFA2Q96DR5 249 aa16.59■□□□□ 0.25
SMARCB1-204ENST00000407422 RNF121Q9H920 327 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms