RNA–Protein interactions for RNA: ENST00000406938.2

CHKB-201, Transcript of choline kinase beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHKB, Length 1,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-201ENST00000406938 PAK1IP1Q9NWT1 392 aaPredicted RBP18.14■□□□□ 0.49
CHKB-201ENST00000406938 SCN3BQ9NY72 215 aa18.14■□□□□ 0.49
CHKB-201ENST00000406938 FOXD3Q9UJU5 478 aaPredicted RBP18.14■□□□□ 0.49
CHKB-201ENST00000406938 BLOC1S6Q9UL45 172 aa18.14■□□□□ 0.49
CHKB-201ENST00000406938 RPL36Q9Y3U8 105 aaKnown RBP18.14■□□□□ 0.49
CHKB-201ENST00000406938 FKBP7Q9Y680 259 aa18.14■□□□□ 0.49
CHKB-201ENST00000406938 IGKV1D-43A0A0B4J1Z2 117 aa18.13■□□□□ 0.49
CHKB-201ENST00000406938 MBD3L4A6NDZ8 208 aaPredicted RBP18.13■□□□□ 0.49
CHKB-201ENST00000406938 MBD3L3A6NE82 208 aaPredicted RBP18.13■□□□□ 0.49
CHKB-201ENST00000406938 MBD3L5A6NJ08 208 aaPredicted RBP18.13■□□□□ 0.49
CHKB-201ENST00000406938 SLC22A31A6NKX4 558 aa18.13■□□□□ 0.49
CHKB-201ENST00000406938 FAM171A2A8MVW0 826 aa18.13■□□□□ 0.49
CHKB-201ENST00000406938 SS18L1O75177 396 aaPredicted RBP18.13■□□□□ 0.49
CHKB-201ENST00000406938 SLC43A1O75387 559 aa18.13■□□□□ 0.49
CHKB-201ENST00000406938 MRPL33O75394 65 aaKnown RBP18.13■□□□□ 0.49
CHKB-201ENST00000406938 LYNP07948 512 aa18.13■□□□□ 0.49
CHKB-201ENST00000406938 MTNR1AP48039 350 aa18.13■□□□□ 0.49
CHKB-201ENST00000406938 LGALS3BPQ08380 585 aa18.13■□□□□ 0.49
CHKB-201ENST00000406938 KCTD21Q4G0X4 260 aa18.13■□□□□ 0.49
CHKB-201ENST00000406938 SEM1Q6ZVN7 128 aa18.13■□□□□ 0.49
CHKB-201ENST00000406938 ZBTB46Q86UZ6 589 aa18.13■□□□□ 0.49
CHKB-201ENST00000406938 RPRMLQ8N4K4 120 aa18.13■□□□□ 0.49
CHKB-201ENST00000406938 ZNF540Q8NDQ6 660 aa18.13■□□□□ 0.49
CHKB-201ENST00000406938 OR6K6Q8NGW6 343 aa18.13■□□□□ 0.49
CHKB-201ENST00000406938 OR6N1Q8NGY5 312 aa18.13■□□□□ 0.49
CHKB-201ENST00000406938 MBD3L2Q8NHZ7 208 aaPredicted RBP18.13■□□□□ 0.49
CHKB-201ENST00000406938 SGCDQ92629 289 aa18.13■□□□□ 0.49
CHKB-201ENST00000406938 TMEM54Q969K7 222 aa18.13■□□□□ 0.49
CHKB-201ENST00000406938 TEAD3Q99594 435 aa18.13■□□□□ 0.49
CHKB-201ENST00000406938 TM9SF2Q99805 663 aa18.13■□□□□ 0.49
CHKB-201ENST00000406938 TP63Q9H3D4 680 aaPredicted RBP18.13■□□□□ 0.49
CHKB-201ENST00000406938 GLRX2Q9NS18 164 aa18.13■□□□□ 0.49
CHKB-201ENST00000406938 GLTPQ9NZD2 209 aa18.13■□□□□ 0.49
CHKB-201ENST00000406938 WARS2Q9UGM6 360 aaKnown RBP18.13■□□□□ 0.49
CHKB-201ENST00000406938 PSORS1C1Q9UIG5 152 aa18.13■□□□□ 0.49
CHKB-201ENST00000406938 B9D1Q9UPM9 204 aa18.13■□□□□ 0.49
CHKB-201ENST00000406938 ALPK2Q86TB3 2170 aa18.13■□□□□ 0.49
CHKB-201ENST00000406938 IGLV1-36A0A0B4J1U3 117 aa18.12■□□□□ 0.49
CHKB-201ENST00000406938 PTGES3LE9PB15 166 aa18.12■□□□□ 0.49
CHKB-201ENST00000406938 NR2C1P13056 603 aa18.12■□□□□ 0.49
CHKB-201ENST00000406938 CRABP1P29762 137 aa18.12■□□□□ 0.49
CHKB-201ENST00000406938 GSTT1P30711 240 aa18.12■□□□□ 0.49
CHKB-201ENST00000406938 SLC15A1P46059 708 aa18.12■□□□□ 0.49
CHKB-201ENST00000406938 GUSBP1Q15486 140 aa18.12■□□□□ 0.49
CHKB-201ENST00000406938 ETFDHQ16134 617 aa18.12■□□□□ 0.49
CHKB-201ENST00000406938 SLC35D3Q5M8T2 416 aa18.12■□□□□ 0.49
CHKB-201ENST00000406938 PHYHD1Q5SRE7 291 aa18.12■□□□□ 0.49
CHKB-201ENST00000406938 THEM4Q5T1C6 240 aa18.12■□□□□ 0.49
CHKB-201ENST00000406938 AHSA2Q719I0 299 aa18.12■□□□□ 0.49
CHKB-201ENST00000406938 DOLPP1Q86YN1 238 aa18.12■□□□□ 0.49
CHKB-201ENST00000406938 C20orf196Q8IYI0 205 aa18.12■□□□□ 0.49
CHKB-201ENST00000406938 FNDC8Q8TC99 324 aa18.12■□□□□ 0.49
CHKB-201ENST00000406938 ZMYND19Q96E35 227 aaPredicted RBP18.12■□□□□ 0.49
CHKB-201ENST00000406938 RNFT2Q96EX2 444 aa18.12■□□□□ 0.49
CHKB-201ENST00000406938 RBP7Q96R05 134 aa18.12■□□□□ 0.49
CHKB-201ENST00000406938 RACGAP1Q9H0H5 632 aa18.12■□□□□ 0.49
CHKB-201ENST00000406938 ZNF696Q9H7X3 374 aa18.12■□□□□ 0.49
CHKB-201ENST00000406938 PARPBPQ9NWS1 579 aa18.12■□□□□ 0.49
CHKB-201ENST00000406938 TINAGQ9UJW2 476 aa18.12■□□□□ 0.49
CHKB-201ENST00000406938 TPRKBQ9Y3C4 175 aa18.12■□□□□ 0.49
CHKB-201ENST00000406938 CACNA1BQ00975 2339 aa18.12■□□□□ 0.49
CHKB-201ENST00000406938 GLCEO94923 617 aa18.12■□□□□ 0.49
CHKB-201ENST00000406938 APOL3O95236 402 aa18.12■□□□□ 0.49
CHKB-201ENST00000406938 HOXD4P09016 255 aaPredicted RBP18.12■□□□□ 0.49
CHKB-201ENST00000406938 EDNRAP25101 427 aa18.12■□□□□ 0.49
CHKB-201ENST00000406938 SLC35A2P78381 396 aa18.12■□□□□ 0.49
CHKB-201ENST00000406938 LINC01590Q5TEZ4 76 aa18.12■□□□□ 0.49
CHKB-201ENST00000406938 LCN1P1Q5VSP4 162 aa18.12■□□□□ 0.49
CHKB-201ENST00000406938 OR2A2Q6IF42 318 aa18.12■□□□□ 0.49
CHKB-201ENST00000406938 DNM1P34Q6PK57 102 aa18.12■□□□□ 0.49
CHKB-201ENST00000406938 LYPD4Q6UWN0 246 aa18.12■□□□□ 0.49
CHKB-201ENST00000406938 B3GNT6Q6ZMB0 384 aa18.12■□□□□ 0.49
CHKB-201ENST00000406938 NUFIP2Q7Z417 695 aaKnown RBP18.12■□□□□ 0.49
CHKB-201ENST00000406938 ST6GALNAC3Q8NDV1 305 aa18.12■□□□□ 0.49
CHKB-201ENST00000406938 GGHQ92820 318 aa18.12■□□□□ 0.49
CHKB-201ENST00000406938 MCHR2Q969V1 340 aa18.12■□□□□ 0.49
CHKB-201ENST00000406938 INTS12Q96CB8 462 aaKnown RBP18.12■□□□□ 0.49
CHKB-201ENST00000406938 FKBP14Q9NWM8 211 aa18.12■□□□□ 0.49
CHKB-201ENST00000406938 MOKQ9UQ07 419 aa18.12■□□□□ 0.49
CHKB-201ENST00000406938 QDPRP09417 244 aa18.11■□□□□ 0.49
CHKB-201ENST00000406938 EEF1B2P24534 225 aaKnown RBP18.11■□□□□ 0.49
CHKB-201ENST00000406938 GABARAPL2P60520 117 aa18.11■□□□□ 0.49
CHKB-201ENST00000406938 LRFN4Q6PJG9 635 aa18.11■□□□□ 0.49
CHKB-201ENST00000406938 NSMAFQ92636 917 aa18.11■□□□□ 0.49
CHKB-201ENST00000406938 FOXN4Q96NZ1 517 aa18.11■□□□□ 0.49
CHKB-201ENST00000406938 ALKBH3Q96Q83 286 aaPredicted RBP18.11■□□□□ 0.49
CHKB-201ENST00000406938 CNOT2Q9NZN8 540 aaKnown RBP18.11■□□□□ 0.49
CHKB-201ENST00000406938 EPG5Q9HCE0 2579 aa18.11■□□□□ 0.49
CHKB-201ENST00000406938 EFCAB10A6NFE3 127 aa18.1■□□□□ 0.49
CHKB-201ENST00000406938 EIF4E1BA6NMX2 242 aaKnown RBP18.1■□□□□ 0.49
CHKB-201ENST00000406938 UPK3AO75631 287 aa18.1■□□□□ 0.49
CHKB-201ENST00000406938 PIPP12273 146 aaPredicted RBP18.1■□□□□ 0.49
CHKB-201ENST00000406938 CDH15P55291 814 aa18.1■□□□□ 0.49
CHKB-201ENST00000406938 SIRPAP78324 504 aa18.1■□□□□ 0.49
CHKB-201ENST00000406938 GTF3C1Q12789 2109 aa18.1■□□□□ 0.49
CHKB-201ENST00000406938 TMED1Q13445 227 aa18.1■□□□□ 0.49
CHKB-201ENST00000406938 FAM214BQ7L5A3 538 aa18.1■□□□□ 0.49
CHKB-201ENST00000406938 SHFQ7M4L6 423 aa18.1■□□□□ 0.49
CHKB-201ENST00000406938 OR51G2Q8NGK0 314 aa18.1■□□□□ 0.49
CHKB-201ENST00000406938 APH1AQ96BI3 265 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms