RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 RANGRFQ9HD47 186 aaPredicted RBP11.14□□□□□ -0.63
SMCR8-201ENST00000406438 PURGQ9UJV8 347 aaKnown RBP11.14□□□□□ -0.63
SMCR8-201ENST00000406438 TESK1Q15569 626 aa11.14□□□□□ -0.63
SMCR8-201ENST00000406438 OR51A2Q8NGJ7 313 aa11.14□□□□□ -0.63
SMCR8-201ENST00000406438 TMEM106AQ96A25 262 aa11.14□□□□□ -0.63
SMCR8-201ENST00000406438 PKD1L3Q7Z443 1732 aa11.14□□□□□ -0.63
SMCR8-201ENST00000406438 HS3ST1O14792 307 aa11.14□□□□□ -0.63
SMCR8-201ENST00000406438 C1SP09871 688 aa11.14□□□□□ -0.63
SMCR8-201ENST00000406438 SORDQ00796 357 aa11.14□□□□□ -0.63
SMCR8-201ENST00000406438 DEFA6Q01524 100 aa11.14□□□□□ -0.63
SMCR8-201ENST00000406438 TAF9Q16594 264 aa11.14□□□□□ -0.63
SMCR8-201ENST00000406438 ATP13A2Q9NQ11 1180 aa11.14□□□□□ -0.63
SMCR8-201ENST00000406438 MUTYHQ9UIF7 546 aa11.14□□□□□ -0.63
SMCR8-201ENST00000406438 TCRBV3S1A0A5B6 114 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 ZNF814B7Z6K7 855 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 RAB27BO00194 218 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 OR8G3PP0DMU2 310 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 SYPL1Q16563 259 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 PLK5Q496M5 336 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 GGTA1PQ4G0N0 100 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 SOHLH1Q5JUK2 328 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 OR10K2Q6IF99 312 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 FRMPD2BQ6IN97 320 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 FAM122CQ6P4D5 195 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 C17orf99Q6UX52 265 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 KANSL1Q7Z3B3 1105 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 LGALS14Q8TCE9 139 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 RNF141Q8WVD5 230 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 HPSE2Q8WWQ2 592 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 ARRDC3Q96B67 414 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 PDLIM5Q96HC4 596 aaKnown RBP11.13□□□□□ -0.63
SMCR8-201ENST00000406438 DHRS9Q9BPW9 319 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 CORINQ9Y5Q5 1042 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 HTR1FP30939 366 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 GNB2P62879 340 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 DEFB103AP81534 67 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 ZNF252P-AS1Q0IIN9 211 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 EDDM3AQ14507 147 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 PATZ1Q9HBE1 687 aaKnown RBP11.13□□□□□ -0.63
SMCR8-201ENST00000406438 OR52A1Q9UKL2 312 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 A0A0U1RQS6 177 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 NXPH3O95157 252 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 SCG5P05408 212 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 HPNP05981 417 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 TNFSF8P32971 234 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 ZMAT1Q5H9K5 638 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 SUCNR1Q9BXA5 334 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 OSGIN1Q9UJX0 560 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 H0YIV9 168 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 NDUFB7P17568 137 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 CTSCP53634 463 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 SIX1Q15475 284 aaPredicted RBP11.13□□□□□ -0.63
SMCR8-201ENST00000406438 RAB6CQ53S08 254 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 FAM173AQ9BQD7 235 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 RAB6CQ9H0N0 254 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 EXOSC3Q9NQT5 275 aaKnown RBP11.13□□□□□ -0.63
SMCR8-201ENST00000406438 LHX3Q9UBR4 397 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 PRSS21Q9Y6M0 314 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 BHLHE40O14503 412 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 OR5D18Q8NGL1 313 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 ZNF582Q96NG8 517 aaPredicted RBP11.13□□□□□ -0.63
SMCR8-201ENST00000406438 QRSL1Q9H0R6 528 aaKnown RBP11.13□□□□□ -0.63
SMCR8-201ENST00000406438 PLEKHF2Q9H8W4 249 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 ACOD1A6NK06 481 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 ANGPTL7O43827 346 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 CLINT1Q14677 625 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 OR8G2PQ6IF36 304 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 ADAMTSL4Q6UY14 1074 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 MDGA2Q7Z553 956 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 OR2L13Q8N349 312 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 GGHQ92820 318 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 REEP6Q96HR9 211 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 KCNJ15Q99712 375 aa11.13□□□□□ -0.63
SMCR8-201ENST00000406438 MYLKQ15746 1914 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 KRBOX1C9JBD0 128 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 CR2P20023 1033 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 TAGLN2P37802 199 aaKnown RBP11.12□□□□□ -0.63
SMCR8-201ENST00000406438 VEGFBP49765 207 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 SELPLGQ14242 412 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 ENTHD1Q8IYW4 607 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 VN1R2Q8NFZ6 395 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 M1APQ8TC57 530 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 ZNRF4Q8WWF5 429 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 MMACHCQ9Y4U1 282 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 NUMBLQ9Y6R0 609 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 SLC31A2O15432 143 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 SLC6A11P48066 632 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 HSF5Q4G112 596 aaPredicted RBP11.12□□□□□ -0.63
SMCR8-201ENST00000406438 GHSRQ92847 366 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 ERVMER34-1Q9H9K5 563 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 CASP8AP2Q9UKL3 1982 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 GPR171O14626 319 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 CTRB1P17538 263 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 IL10RAQ13651 578 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 GLYATL3Q5SZD4 288 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 CTRB2Q6GPI1 263 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 ADGRE4PQ86SQ3 457 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 HES7Q9BYE0 225 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 PTTG3PQ9NZH4 202 aa11.12□□□□□ -0.63
SMCR8-201ENST00000406438 NPAP1Q9NZP6 1156 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms