RNA–Protein interactions for RNA: ENST00000403904.5

CSNK1E-204, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CSNK1E, Length 1,580 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-204ENST00000403904 A8MXE2 369 aa29.36■■■□□ 2.29
CSNK1E-204ENST00000403904 M0R129 80 aa29.36■■■□□ 2.29
CSNK1E-204ENST00000403904 DBPQ10586 325 aaPredicted RBP29.36■■■□□ 2.29
CSNK1E-204ENST00000403904 LRFN4Q6PJG9 635 aa29.36■■■□□ 2.29
CSNK1E-204ENST00000403904 ZNF474Q6S9Z5 364 aaPredicted RBP29.36■■■□□ 2.29
CSNK1E-204ENST00000403904 SLC37A3Q8NCC5 494 aa29.36■■■□□ 2.29
CSNK1E-204ENST00000403904 LILRB4Q8NHJ6 448 aa29.36■■■□□ 2.29
CSNK1E-204ENST00000403904 ITLN2Q8WWU7 325 aaPredicted RBP29.36■■■□□ 2.29
CSNK1E-204ENST00000403904 SLC38A2Q96QD8 506 aa29.36■■■□□ 2.29
CSNK1E-204ENST00000403904 SYT4Q9H2B2 425 aa29.36■■■□□ 2.29
CSNK1E-204ENST00000403904 JKAMPQ9P055 326 aa29.36■■■□□ 2.29
CSNK1E-204ENST00000403904 OR6C68A6NDL8 312 aa29.35■■■□□ 2.29
CSNK1E-204ENST00000403904 FAM90A27PA6NNH2 459 aa29.35■■■□□ 2.29
CSNK1E-204ENST00000403904 IFNGP01579 166 aa29.35■■■□□ 2.29
CSNK1E-204ENST00000403904 QDPRP09417 244 aa29.35■■■□□ 2.29
CSNK1E-204ENST00000403904 CRMP1Q14194 572 aa29.35■■■□□ 2.29
CSNK1E-204ENST00000403904 IZUMO2Q6UXV1 221 aa29.35■■■□□ 2.29
CSNK1E-204ENST00000403904 CYGBQ8WWM9 190 aa29.35■■■□□ 2.29
CSNK1E-204ENST00000403904 MCHR2Q969V1 340 aa29.35■■■□□ 2.29
CSNK1E-204ENST00000403904 RBP7Q96R05 134 aa29.35■■■□□ 2.29
CSNK1E-204ENST00000403904 ULBP2Q9BZM5 246 aa29.35■■■□□ 2.29
CSNK1E-204ENST00000403904 CRLF2Q9HC73 371 aa29.35■■■□□ 2.29
CSNK1E-204ENST00000403904 ASB6Q9NWX5 421 aa29.35■■■□□ 2.29
CSNK1E-204ENST00000403904 VSX1Q9NZR4 365 aaPredicted RBP29.35■■■□□ 2.29
CSNK1E-204ENST00000403904 NDRG4Q9ULP0 352 aaKnown RBP29.35■■■□□ 2.29
CSNK1E-204ENST00000403904 GPR52Q9Y2T5 361 aa29.35■■■□□ 2.29
CSNK1E-204ENST00000403904 FOXG1P55316 489 aaPredicted RBP29.35■■■□□ 2.29
CSNK1E-204ENST00000403904 Q6ZT83 130 aa29.35■■■□□ 2.29
CSNK1E-204ENST00000403904 DHRSXQ8N5I4 330 aa29.35■■■□□ 2.29
CSNK1E-204ENST00000403904 ZNF555Q8NEP9 628 aa29.35■■■□□ 2.29
CSNK1E-204ENST00000403904 NMD3Q96D46 503 aaKnown RBP29.35■■■□□ 2.29
CSNK1E-204ENST00000403904 ZNF837Q96EG3 531 aaPredicted RBP29.35■■■□□ 2.29
CSNK1E-204ENST00000403904 PLEKHA8Q96JA3 519 aa29.35■■■□□ 2.29
CSNK1E-204ENST00000403904 DDOQ99489 341 aa29.35■■■□□ 2.29
CSNK1E-204ENST00000403904 FN3KQ9H479 309 aa29.35■■■□□ 2.29
CSNK1E-204ENST00000403904 B3GAT2Q9NPZ5 323 aa29.35■■■□□ 2.29
CSNK1E-204ENST00000403904 GMPPBQ9Y5P6 360 aa29.35■■■□□ 2.29
CSNK1E-204ENST00000403904 IGKV1D-43A0A0B4J1Z2 117 aa29.34■■■□□ 2.29
CSNK1E-204ENST00000403904 SLC16A6O15403 523 aa29.34■■■□□ 2.29
CSNK1E-204ENST00000403904 CNOT4O95628 575 aaKnown RBP29.34■■■□□ 2.29
CSNK1E-204ENST00000403904 RENP00797 406 aa29.34■■■□□ 2.29
CSNK1E-204ENST00000403904 ZNF3P17036 446 aa29.34■■■□□ 2.29
CSNK1E-204ENST00000403904 GGT2P36268 569 aa29.34■■■□□ 2.29
CSNK1E-204ENST00000403904 ROR2Q01974 943 aaKnown RBP29.34■■■□□ 2.29
CSNK1E-204ENST00000403904 SLC25A35Q3KQZ1 300 aa29.34■■■□□ 2.29
CSNK1E-204ENST00000403904 THEM4Q5T1C6 240 aa29.34■■■□□ 2.29
CSNK1E-204ENST00000403904 BEND4Q6ZU67 534 aa29.34■■■□□ 2.29
CSNK1E-204ENST00000403904 TSSK2Q96PF2 358 aa29.34■■■□□ 2.29
CSNK1E-204ENST00000403904 ADI1Q9BV57 179 aa29.34■■■□□ 2.29
CSNK1E-204ENST00000403904 GPR35Q9HC97 309 aa29.34■■■□□ 2.29
CSNK1E-204ENST00000403904 RPRD1BQ9NQG5 326 aaKnown RBP29.34■■■□□ 2.29
CSNK1E-204ENST00000403904 ZNF587BE7ETH6 402 aa29.33■■■□□ 2.29
CSNK1E-204ENST00000403904 H0YJX3 145 aa29.33■■■□□ 2.29
CSNK1E-204ENST00000403904 AHCYL1O43865 530 aa29.33■■■□□ 2.29
CSNK1E-204ENST00000403904 ITGADQ13349 1161 aa29.33■■■□□ 2.29
CSNK1E-204ENST00000403904 C9orf135Q5VTT2 229 aa29.33■■■□□ 2.29
CSNK1E-204ENST00000403904 XKRXQ6PP77 449 aa29.33■■■□□ 2.29
CSNK1E-204ENST00000403904 GABRG1Q8N1C3 465 aa29.33■■■□□ 2.29
CSNK1E-204ENST00000403904 FAM81AQ8TBF8 368 aa29.33■■■□□ 2.29
CSNK1E-204ENST00000403904 SNX18Q96RF0 628 aa29.33■■■□□ 2.29
CSNK1E-204ENST00000403904 PITX2Q99697 317 aa29.33■■■□□ 2.29
CSNK1E-204ENST00000403904 PRRG3Q9BZD7 231 aa29.33■■■□□ 2.29
CSNK1E-204ENST00000403904 NUAK2Q9H093 628 aa29.33■■■□□ 2.29
CSNK1E-204ENST00000403904 RASSF4Q9H2L5 321 aa29.33■■■□□ 2.29
CSNK1E-204ENST00000403904 RERGLQ9H628 205 aa29.33■■■□□ 2.29
CSNK1E-204ENST00000403904 NKX2-6A6NCS4 301 aa29.32■■■□□ 2.28
CSNK1E-204ENST00000403904 FAM183AA6NL82 134 aa29.32■■■□□ 2.28
CSNK1E-204ENST00000403904 PRKYO43930 277 aa29.32■■■□□ 2.28
CSNK1E-204ENST00000403904 AGFG2O95081 481 aa29.32■■■□□ 2.28
CSNK1E-204ENST00000403904 SRSF1Q07955 248 aaKnown RBP eCLIP29.32■■■□□ 2.281e-6■□□□□ 11.3
CSNK1E-204ENST00000403904 ZNF808Q8N4W9 903 aaPredicted RBP29.32■■■□□ 2.28
CSNK1E-204ENST00000403904 TCEANCQ8N8B7 351 aa29.32■■■□□ 2.28
CSNK1E-204ENST00000403904 FNDC8Q8TC99 324 aa29.32■■■□□ 2.28
CSNK1E-204ENST00000403904 RBM24Q9BX46 236 aaKnown RBP29.32■■■□□ 2.28
CSNK1E-204ENST00000403904 AGAP20933 346 aa29.31■■■□□ 2.28
CSNK1E-204ENST00000403904 PCYT1AP49585 367 aa29.31■■■□□ 2.28
CSNK1E-204ENST00000403904 CDC42P60953 191 aa29.31■■■□□ 2.28
CSNK1E-204ENST00000403904 ADARB1P78563 741 aaKnown RBP29.31■■■□□ 2.28
CSNK1E-204ENST00000403904 CEACAM16Q2WEN9 425 aa29.31■■■□□ 2.28
CSNK1E-204ENST00000403904 NSMAFQ92636 917 aa29.31■■■□□ 2.28
CSNK1E-204ENST00000403904 UBE2FQ969M7 185 aa29.31■■■□□ 2.28
CSNK1E-204ENST00000403904 OTULINQ96BN8 352 aa29.31■■■□□ 2.28
CSNK1E-204ENST00000403904 IL4I1Q96RQ9 567 aa29.31■■■□□ 2.28
CSNK1E-204ENST00000403904 MED20Q9H944 212 aa29.31■■■□□ 2.28
CSNK1E-204ENST00000403904 SRA1Q9HD15 236 aaKnown RBP29.31■■■□□ 2.28
CSNK1E-204ENST00000403904 USP9XQ93008 2570 aaPredicted RBP29.31■■■□□ 2.28
CSNK1E-204ENST00000403904 DCTN6O00399 190 aa29.3■■■□□ 2.28
CSNK1E-204ENST00000403904 SLC16A7O60669 478 aa29.3■■■□□ 2.28
CSNK1E-204ENST00000403904 CLIC3O95833 236 aa29.3■■■□□ 2.28
CSNK1E-204ENST00000403904 NR2C1P13056 603 aa29.3■■■□□ 2.28
CSNK1E-204ENST00000403904 CTLA4P16410 223 aa29.3■■■□□ 2.28
CSNK1E-204ENST00000403904 IGHV1-2P23083 117 aa29.3■■■□□ 2.28
CSNK1E-204ENST00000403904 ETFDHQ16134 617 aa29.3■■■□□ 2.28
CSNK1E-204ENST00000403904 ABHD12BQ7Z5M8 362 aaPredicted RBP29.3■■■□□ 2.28
CSNK1E-204ENST00000403904 OR9Q1Q8NGQ5 310 aa29.3■■■□□ 2.28
CSNK1E-204ENST00000403904 ADGRG4Q8IZF6 3080 aa29.3■■■□□ 2.28
CSNK1E-204ENST00000403904 RPL36A-HNRNPH2H7BZ11 118 aa29.3■■■□□ 2.28
CSNK1E-204ENST00000403904 DHHO43323 396 aa29.3■■■□□ 2.28
CSNK1E-204ENST00000403904 TLX2O43763 284 aaPredicted RBP29.3■■■□□ 2.28
CSNK1E-204ENST00000403904 EFNB1P98172 346 aa29.3■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms