RNA–Protein interactions for RNA: ENST00000399429.7

COL28A1-201, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL28A1, Length 4,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-201ENST00000399429 SLC33A1O00400 549 aaPredicted RBP8.55□□□□□ -1.04
COL28A1-201ENST00000399429 HOXA2O43364 376 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 PLGP00747 810 aaPredicted RBP8.55□□□□□ -1.04
COL28A1-201ENST00000399429 ITGA5P08648 1049 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 CALCBP10092 127 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 ABOP16442 354 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 CASP6P55212 293 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 LCN6P62502 163 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 TGIF1Q15583 401 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 ACER2Q5QJU3 275 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 LIPNQ5VXI9 398 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 STAC2Q6ZMT1 411 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 SLC35D2Q76EJ3 337 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 ACOT4Q8N9L9 421 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 OR1J1Q8NGS3 322 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 C5orf34Q96MH7 638 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 FOXJ3Q9UPW0 622 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 ST8SIA5O15466 376 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 CYB5BO43169 146 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 HSPA12AO43301 675 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 VSIG10L2P0DP72 767 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 GALP22466 123 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 NPY4RP50391 375 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 GNMTQ14749 295 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 AWAT1Q58HT5 328 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 FAM26DQ5JW98 314 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 HLA-DQA1Q5Y7H0 255 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 KCTD18Q6PI47 426 aaPredicted RBP8.55□□□□□ -1.04
COL28A1-201ENST00000399429 IL34Q6ZMJ4 242 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 DPY19L4Q7Z388 723 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 OR4S1Q8NGB4 309 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 FNDC9Q8TBE3 224 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 SUSD6Q92537 303 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 HAS2Q92819 552 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 PHYHIPLQ96FC7 376 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 ALG12Q9BV10 488 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 CGGBP1Q9UFW8 167 aaPredicted RBP8.55□□□□□ -1.04
COL28A1-201ENST00000399429 OR5V1Q9UGF6 321 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 COL24A1Q17RW2 1714 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 MBLAC1A4D2B0 266 aaPredicted RBP8.55□□□□□ -1.04
COL28A1-201ENST00000399429 OR6C76A6NM76 312 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 FKTNO75072 461 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 CSTAP01040 98 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 RAB5AP20339 215 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 TBXA2RP21731 343 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 TAS2R31P59538 309 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 GPR157Q5UAW9 335 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 CD200R1LQ6Q8B3 271 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 CPXM2Q8N436 756 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 GOT1L1Q8NHS2 421 aaPredicted RBP8.55□□□□□ -1.04
COL28A1-201ENST00000399429 PELI1Q96FA3 418 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 OR5B12Q96R08 314 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 REG4Q9BYZ8 158 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 OR11A1Q9GZK7 315 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 PARPBPQ9NWS1 579 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 YIPF1Q9Y548 306 aa8.55□□□□□ -1.04
COL28A1-201ENST00000399429 A0A1W2PRU2 124 aa8.54□□□□□ -1.04
COL28A1-201ENST00000399429 ARGFXA6NJG6 315 aa8.54□□□□□ -1.04
COL28A1-201ENST00000399429 IDSB3KWA1 339 aa8.54□□□□□ -1.04
COL28A1-201ENST00000399429 LATO43561 262 aa8.54□□□□□ -1.04
COL28A1-201ENST00000399429 MPIG6BO95866 241 aa8.54□□□□□ -1.04
COL28A1-201ENST00000399429 CTSLP07711 333 aa8.54□□□□□ -1.04
COL28A1-201ENST00000399429 C1SP09871 688 aa8.54□□□□□ -1.04
COL28A1-201ENST00000399429 TFPIP10646 304 aa8.54□□□□□ -1.04
COL28A1-201ENST00000399429 GATMP50440 423 aa8.54□□□□□ -1.04
COL28A1-201ENST00000399429 CSNK2A1P68400 391 aaPredicted RBP8.54□□□□□ -1.04
COL28A1-201ENST00000399429 ELOCQ15369 112 aa8.54□□□□□ -1.04
COL28A1-201ENST00000399429 RNF151Q2KHN1 245 aa8.54□□□□□ -1.04
COL28A1-201ENST00000399429 LIMS2Q7Z4I7 341 aa8.54□□□□□ -1.04
COL28A1-201ENST00000399429 SERINC5Q86VE9 423 aa8.54□□□□□ -1.04
COL28A1-201ENST00000399429 FAM219AQ8IW50 185 aa8.54□□□□□ -1.04
COL28A1-201ENST00000399429 CSNK2A3Q8NEV1 391 aa8.54□□□□□ -1.04
COL28A1-201ENST00000399429 OR9K2Q8NGE7 335 aa8.54□□□□□ -1.04
COL28A1-201ENST00000399429 OR6N1Q8NGY5 312 aa8.54□□□□□ -1.04
COL28A1-201ENST00000399429 RGP1Q92546 391 aaPredicted RBP8.54□□□□□ -1.04
COL28A1-201ENST00000399429 TOMM40LQ969M1 308 aa8.54□□□□□ -1.04
COL28A1-201ENST00000399429 WFDC6Q9BQY6 131 aa8.54□□□□□ -1.04
COL28A1-201ENST00000399429 OCSTAMPQ9BR26 566 aa8.54□□□□□ -1.04
COL28A1-201ENST00000399429 PRSS16Q9NQE7 514 aa8.54□□□□□ -1.04
COL28A1-201ENST00000399429 MED19A0JLT2 244 aaPredicted RBP8.54□□□□□ -1.04
COL28A1-201ENST00000399429 C7orf77A4D0Y5 90 aa8.54□□□□□ -1.04
COL28A1-201ENST00000399429 ASGR1P07306 291 aa8.54□□□□□ -1.04
COL28A1-201ENST00000399429 BTCP35070 178 aa8.54□□□□□ -1.04
COL28A1-201ENST00000399429 IGFALSP35858 605 aa8.54□□□□□ -1.04
COL28A1-201ENST00000399429 HSD17B2P37059 387 aa8.54□□□□□ -1.04
COL28A1-201ENST00000399429 ARL4DP49703 201 aa8.54□□□□□ -1.04
COL28A1-201ENST00000399429 INPP5JQ15735 1006 aaPredicted RBP8.54□□□□□ -1.04
COL28A1-201ENST00000399429 ZNF239Q16600 458 aaKnown RBP8.54□□□□□ -1.04
COL28A1-201ENST00000399429 EOGTQ5NDL2 527 aa8.54□□□□□ -1.04
COL28A1-201ENST00000399429 RTP2Q5QGT7 225 aa8.54□□□□□ -1.04
COL28A1-201ENST00000399429 ARIH2OSQ8N7S6 290 aa8.54□□□□□ -1.04
COL28A1-201ENST00000399429 SEMA6DQ8NFY4 1073 aa8.54□□□□□ -1.04
COL28A1-201ENST00000399429 PHYHIPQ92561 330 aa8.54□□□□□ -1.04
COL28A1-201ENST00000399429 INTS12Q96CB8 462 aaKnown RBP8.54□□□□□ -1.04
COL28A1-201ENST00000399429 RRNAD1Q96FB5 475 aaKnown RBP8.54□□□□□ -1.04
COL28A1-201ENST00000399429 SLC41A2Q96JW4 573 aa8.54□□□□□ -1.04
COL28A1-201ENST00000399429 PBX4Q9BYU1 374 aa8.54□□□□□ -1.04
COL28A1-201ENST00000399429 ZNF275Q9NSD4 429 aaPredicted RBP8.54□□□□□ -1.04
COL28A1-201ENST00000399429 MTFP1Q9UDX5 166 aa8.54□□□□□ -1.04
COL28A1-201ENST00000399429 GPR55Q9Y2T6 319 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms