RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 IGLV1-44P01699 117 aa12.26□□□□□ -0.45
HLA-DQB1-202ENST00000399079 CD8AP01732 235 aa12.26□□□□□ -0.45
HLA-DQB1-202ENST00000399079 PATE4P0C8F1 98 aa12.26□□□□□ -0.45
HLA-DQB1-202ENST00000399079 CD79AP11912 226 aa12.26□□□□□ -0.45
HLA-DQB1-202ENST00000399079 CBR1P16152 277 aa12.26□□□□□ -0.45
HLA-DQB1-202ENST00000399079 RRM2P31350 389 aa12.26□□□□□ -0.45
HLA-DQB1-202ENST00000399079 CDKN1AP38936 164 aa12.26□□□□□ -0.45
HLA-DQB1-202ENST00000399079 OMPP47874 163 aa12.26□□□□□ -0.45
HLA-DQB1-202ENST00000399079 LIMS1P48059 325 aa12.26□□□□□ -0.45
HLA-DQB1-202ENST00000399079 SLC9A3P48764 834 aa12.26□□□□□ -0.45
HLA-DQB1-202ENST00000399079 IDH3GP51553 393 aaPredicted RBP12.26□□□□□ -0.45
HLA-DQB1-202ENST00000399079 FMODQ06828 376 aa12.26□□□□□ -0.45
HLA-DQB1-202ENST00000399079 NPRL3Q12980 569 aa12.26□□□□□ -0.45
HLA-DQB1-202ENST00000399079 ZBED5Q49AG3 693 aa12.26□□□□□ -0.45
HLA-DQB1-202ENST00000399079 SKA3Q8IX90 412 aa12.26□□□□□ -0.45
HLA-DQB1-202ENST00000399079 DEPDC4Q8N2C3 294 aa12.26□□□□□ -0.45
HLA-DQB1-202ENST00000399079 TSPAN32Q96QS1 320 aa12.26□□□□□ -0.45
HLA-DQB1-202ENST00000399079 GPA33Q99795 319 aa12.26□□□□□ -0.45
HLA-DQB1-202ENST00000399079 B3GNT2Q9NY97 397 aa12.26□□□□□ -0.45
HLA-DQB1-202ENST00000399079 IL20RAQ9UHF4 553 aa12.26□□□□□ -0.45
HLA-DQB1-202ENST00000399079 PRPF19Q9UMS4 504 aaKnown RBP12.26□□□□□ -0.45
HLA-DQB1-202ENST00000399079 ADAM18Q9Y3Q7 739 aa12.26□□□□□ -0.45
HLA-DQB1-202ENST00000399079 ATP23Q9Y6H3 246 aa12.26□□□□□ -0.45
HLA-DQB1-202ENST00000399079 IGKV1D-43A0A0B4J1Z2 117 aa12.25□□□□□ -0.45
HLA-DQB1-202ENST00000399079 SH3PXD2BA1X283 911 aa12.25□□□□□ -0.45
HLA-DQB1-202ENST00000399079 NPIPB13A6NJU9 1138 aa12.25□□□□□ -0.45
HLA-DQB1-202ENST00000399079 NPIPB4C9JG80 1138 aa12.25□□□□□ -0.45
HLA-DQB1-202ENST00000399079 CALCRP30988 508 aa12.25□□□□□ -0.45
HLA-DQB1-202ENST00000399079 ACVR1BP36896 505 aa12.25□□□□□ -0.45
HLA-DQB1-202ENST00000399079 RPL27P61353 136 aaKnown RBP12.25□□□□□ -0.45
HLA-DQB1-202ENST00000399079 ERVK-25P63136 954 aa12.25□□□□□ -0.45
HLA-DQB1-202ENST00000399079 NAAAQ02083 359 aa12.25□□□□□ -0.45
HLA-DQB1-202ENST00000399079 CD47Q08722 323 aa12.25□□□□□ -0.45
HLA-DQB1-202ENST00000399079 LCN8Q6JVE9 175 aa12.25□□□□□ -0.45
HLA-DQB1-202ENST00000399079 PIWIL3Q7Z3Z3 882 aaKnown RBP12.25□□□□□ -0.45
HLA-DQB1-202ENST00000399079 TGIF2LYQ8IUE0 185 aa12.25□□□□□ -0.45
HLA-DQB1-202ENST00000399079 CCDC36Q8IYA8 594 aa12.25□□□□□ -0.45
HLA-DQB1-202ENST00000399079 SLC22A24Q8N4F4 322 aa12.25□□□□□ -0.45
HLA-DQB1-202ENST00000399079 FGFBP3Q8TAT2 258 aa12.25□□□□□ -0.45
HLA-DQB1-202ENST00000399079 GTPBP3Q969Y2 492 aaKnown RBP12.25□□□□□ -0.45
HLA-DQB1-202ENST00000399079 SLC7A6OSQ96CW6 309 aaPredicted RBP12.25□□□□□ -0.45
HLA-DQB1-202ENST00000399079 MS4A3Q96HJ5 214 aa12.25□□□□□ -0.45
HLA-DQB1-202ENST00000399079 KCNK17Q96T54 332 aa12.25□□□□□ -0.45
HLA-DQB1-202ENST00000399079 SH3GL3Q99963 347 aa12.25□□□□□ -0.45
HLA-DQB1-202ENST00000399079 KATNB1Q9BVA0 655 aa12.25□□□□□ -0.45
HLA-DQB1-202ENST00000399079 CXorf56Q9H5V9 222 aa12.25□□□□□ -0.45
HLA-DQB1-202ENST00000399079 TMEM38BQ9NVV0 291 aa12.25□□□□□ -0.45
HLA-DQB1-202ENST00000399079 SIGLEC7Q9Y286 467 aa12.25□□□□□ -0.45
HLA-DQB1-202ENST00000399079 TMEM5Q9Y2B1 443 aa12.25□□□□□ -0.45
HLA-DQB1-202ENST00000399079 ACANP16112 2415 aa12.24□□□□□ -0.45
HLA-DQB1-202ENST00000399079 OVOL3O00110 214 aa12.24□□□□□ -0.45
HLA-DQB1-202ENST00000399079 PTP4A3O75365 173 aa12.24□□□□□ -0.45
HLA-DQB1-202ENST00000399079 IGHMP01871 453 aa12.24□□□□□ -0.45
HLA-DQB1-202ENST00000399079 CRYAAP02489 173 aa12.24□□□□□ -0.45
HLA-DQB1-202ENST00000399079 TTKP33981 857 aa12.24□□□□□ -0.45
HLA-DQB1-202ENST00000399079 ARR3P36575 388 aa12.24□□□□□ -0.45
HLA-DQB1-202ENST00000399079 RPL4P36578 427 aaKnown RBP12.24□□□□□ -0.45
HLA-DQB1-202ENST00000399079 GIPRP48546 466 aa12.24□□□□□ -0.45
HLA-DQB1-202ENST00000399079 PTH2RP49190 550 aa12.24□□□□□ -0.45
HLA-DQB1-202ENST00000399079 FXYD6P3P58550 94 aa12.24□□□□□ -0.45
HLA-DQB1-202ENST00000399079 GSG1Q2KHT4 349 aa12.24□□□□□ -0.45
HLA-DQB1-202ENST00000399079 ANKDD1AQ495B1 522 aa12.24□□□□□ -0.45
HLA-DQB1-202ENST00000399079 Q5PR19 223 aa12.24□□□□□ -0.45
HLA-DQB1-202ENST00000399079 HDDC2Q7Z4H3 204 aa12.24□□□□□ -0.45
HLA-DQB1-202ENST00000399079 ZER1Q7Z7L7 766 aa12.24□□□□□ -0.45
HLA-DQB1-202ENST00000399079 LRRC75A-AS1Q8N1F1 130 aa12.24□□□□□ -0.45
HLA-DQB1-202ENST00000399079 FAM169BQ8N8A8 192 aa12.24□□□□□ -0.45
HLA-DQB1-202ENST00000399079 ZNF519Q8TB69 540 aa12.24□□□□□ -0.45
HLA-DQB1-202ENST00000399079 NMD3Q96D46 503 aaKnown RBP12.24□□□□□ -0.45
HLA-DQB1-202ENST00000399079 ASB9Q96DX5 294 aa12.24□□□□□ -0.45
HLA-DQB1-202ENST00000399079 DHRS9Q9BPW9 319 aa12.24□□□□□ -0.45
HLA-DQB1-202ENST00000399079 TRAF4Q9BUZ4 470 aaPredicted RBP12.24□□□□□ -0.45
HLA-DQB1-202ENST00000399079 GSX2Q9BZM3 304 aa12.24□□□□□ -0.45
HLA-DQB1-202ENST00000399079 MUC13Q9H3R2 512 aa12.24□□□□□ -0.45
HLA-DQB1-202ENST00000399079 FAIMQ9NVQ4 179 aa12.24□□□□□ -0.45
HLA-DQB1-202ENST00000399079 CENPBD1B2RD01 187 aa12.23□□□□□ -0.45
HLA-DQB1-202ENST00000399079 H7C1C5 153 aa12.23□□□□□ -0.45
HLA-DQB1-202ENST00000399079 ACOT8O14734 319 aa12.23□□□□□ -0.45
HLA-DQB1-202ENST00000399079 GYG2O15488 501 aa12.23□□□□□ -0.45
HLA-DQB1-202ENST00000399079 NDUFS7O75251 213 aa12.23□□□□□ -0.45
HLA-DQB1-202ENST00000399079 OR8G3PP0DMU2 310 aa12.23□□□□□ -0.45
HLA-DQB1-202ENST00000399079 PAX7P23759 505 aa12.23□□□□□ -0.45
HLA-DQB1-202ENST00000399079 CDAP32320 146 aa12.23□□□□□ -0.45
HLA-DQB1-202ENST00000399079 PTDSS1P48651 473 aaKnown RBP12.23□□□□□ -0.45
HLA-DQB1-202ENST00000399079 FABP6P51161 128 aa12.23□□□□□ -0.45
HLA-DQB1-202ENST00000399079 SMIM11AP58511 58 aa12.23□□□□□ -0.45
HLA-DQB1-202ENST00000399079 LCN6P62502 163 aa12.23□□□□□ -0.45
HLA-DQB1-202ENST00000399079 RAB1AP62820 205 aa12.23□□□□□ -0.45
HLA-DQB1-202ENST00000399079 PPP1R8Q12972 351 aaKnown RBP12.23□□□□□ -0.45
HLA-DQB1-202ENST00000399079 TAF11Q15544 211 aa12.23□□□□□ -0.45
HLA-DQB1-202ENST00000399079 C3orf36Q3SXR2 165 aa12.23□□□□□ -0.45
HLA-DQB1-202ENST00000399079 MTX3Q5HYI7 312 aa12.23□□□□□ -0.45
HLA-DQB1-202ENST00000399079 THSD4Q6ZMP0 1018 aa12.23□□□□□ -0.45
HLA-DQB1-202ENST00000399079 DTX2Q86UW9 622 aa12.23□□□□□ -0.45
HLA-DQB1-202ENST00000399079 MUC15Q8N387 334 aa12.23□□□□□ -0.45
HLA-DQB1-202ENST00000399079 NSMAFQ92636 917 aa12.23□□□□□ -0.45
HLA-DQB1-202ENST00000399079 RSRC1Q96IZ7 334 aaKnown RBP12.23□□□□□ -0.45
HLA-DQB1-202ENST00000399079 Q96M85 177 aa12.23□□□□□ -0.45
HLA-DQB1-202ENST00000399079 ZNF75AQ96N20 296 aa12.23□□□□□ -0.45
HLA-DQB1-202ENST00000399079 KCNS3Q9BQ31 491 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms