RNA–Protein interactions for RNA: ENST00000398975.6

COL13A1-204, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 1,057 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-204ENST00000398975 NPIPB13A6NJU9 1138 aa12.56□□□□□ -0.4
COL13A1-204ENST00000398975 NPIPB4C9JG80 1138 aa12.56□□□□□ -0.4
COL13A1-204ENST00000398975 MCIDASD6RGH6 385 aa12.56□□□□□ -0.4
COL13A1-204ENST00000398975 DHHO43323 396 aa12.56□□□□□ -0.4
COL13A1-204ENST00000398975 NDUFS7O75251 213 aa12.56□□□□□ -0.4
COL13A1-204ENST00000398975 GMNNO75496 209 aa12.56□□□□□ -0.4
COL13A1-204ENST00000398975 UBOX5O94941 541 aa12.56□□□□□ -0.4
COL13A1-204ENST00000398975 SLC2A10O95528 541 aa12.56□□□□□ -0.4
COL13A1-204ENST00000398975 IGHG1P01857 330 aa12.56□□□□□ -0.4
COL13A1-204ENST00000398975 IGHMP01871 453 aa12.56□□□□□ -0.4
COL13A1-204ENST00000398975 CDKN1AP38936 164 aa12.56□□□□□ -0.4
COL13A1-204ENST00000398975 ZNF133P52736 654 aaPredicted RBP12.56□□□□□ -0.4
COL13A1-204ENST00000398975 HGFACQ04756 655 aa12.56□□□□□ -0.4
COL13A1-204ENST00000398975 FMODQ06828 376 aa12.56□□□□□ -0.4
COL13A1-204ENST00000398975 PIGFQ07326 219 aa12.56□□□□□ -0.4
COL13A1-204ENST00000398975 TOP3AQ13472 1001 aaPredicted RBP12.56□□□□□ -0.4
COL13A1-204ENST00000398975 Q5PR19 223 aa12.56□□□□□ -0.4
COL13A1-204ENST00000398975 TRPM8Q7Z2W7 1104 aa12.56□□□□□ -0.4
COL13A1-204ENST00000398975 OAFQ86UD1 273 aa12.56□□□□□ -0.4
COL13A1-204ENST00000398975 SKA3Q8IX90 412 aa12.56□□□□□ -0.4
COL13A1-204ENST00000398975 OR4K5Q8NGD3 323 aa12.56□□□□□ -0.4
COL13A1-204ENST00000398975 ZNF519Q8TB69 540 aa12.56□□□□□ -0.4
COL13A1-204ENST00000398975 MCHR2Q969V1 340 aa12.56□□□□□ -0.4
COL13A1-204ENST00000398975 GTPBP3Q969Y2 492 aaKnown RBP12.56□□□□□ -0.4
COL13A1-204ENST00000398975 MS4A3Q96HJ5 214 aa12.56□□□□□ -0.4
COL13A1-204ENST00000398975 TSPAN32Q96QS1 320 aa12.56□□□□□ -0.4
COL13A1-204ENST00000398975 KCNK17Q96T54 332 aa12.56□□□□□ -0.4
COL13A1-204ENST00000398975 DHRS9Q9BPW9 319 aa12.56□□□□□ -0.4
COL13A1-204ENST00000398975 ACTR3BQ9P1U1 418 aa12.56□□□□□ -0.4
COL13A1-204ENST00000398975 ZNF346Q9UL40 294 aaKnown RBP12.56□□□□□ -0.4
COL13A1-204ENST00000398975 FAM32AQ9Y421 112 aaKnown RBP12.56□□□□□ -0.4
COL13A1-204ENST00000398975 ATP23Q9Y6H3 246 aa12.56□□□□□ -0.4
COL13A1-204ENST00000398975 SH3PXD2BA1X283 911 aa12.55□□□□□ -0.4
COL13A1-204ENST00000398975 PTP4A3O75365 173 aa12.55□□□□□ -0.4
COL13A1-204ENST00000398975 TTKP33981 857 aa12.55□□□□□ -0.4
COL13A1-204ENST00000398975 DAP3P51398 398 aaKnown RBP12.55□□□□□ -0.4
COL13A1-204ENST00000398975 CLRN1P58418 232 aa12.55□□□□□ -0.4
COL13A1-204ENST00000398975 CTXN1P60606 82 aa12.55□□□□□ -0.4
COL13A1-204ENST00000398975 RPL27P61353 136 aaKnown RBP12.55□□□□□ -0.4
COL13A1-204ENST00000398975 MST1LQ2TV78 715 aa12.55□□□□□ -0.4
COL13A1-204ENST00000398975 C3orf36Q3SXR2 165 aa12.55□□□□□ -0.4
COL13A1-204ENST00000398975 LCN8Q6JVE9 175 aa12.55□□□□□ -0.4
COL13A1-204ENST00000398975 THSD4Q6ZMP0 1018 aa12.55□□□□□ -0.4
COL13A1-204ENST00000398975 CIARTQ8N365 385 aaPredicted RBP12.55□□□□□ -0.4
COL13A1-204ENST00000398975 SH3GL3Q99963 347 aa12.55□□□□□ -0.4
COL13A1-204ENST00000398975 KATNB1Q9BVA0 655 aa12.55□□□□□ -0.4
COL13A1-204ENST00000398975 IL1RAPQ9NPH3 570 aa12.55□□□□□ -0.4
COL13A1-204ENST00000398975 POU2F3Q9UKI9 436 aa12.55□□□□□ -0.4
COL13A1-204ENST00000398975 SIGLEC7Q9Y286 467 aa12.55□□□□□ -0.4
COL13A1-204ENST00000398975 ADAM18Q9Y3Q7 739 aa12.55□□□□□ -0.4
COL13A1-204ENST00000398975 ARFGEF3Q5TH69 2177 aa12.54□□□□□ -0.4
COL13A1-204ENST00000398975 IGHV2OR16-5A0A0B4J2B6 119 aa12.54□□□□□ -0.4
COL13A1-204ENST00000398975 CD79AP11912 226 aa12.54□□□□□ -0.4
COL13A1-204ENST00000398975 ZNF14P17017 642 aaPredicted RBP12.54□□□□□ -0.4
COL13A1-204ENST00000398975 CDAP32320 146 aa12.54□□□□□ -0.4
COL13A1-204ENST00000398975 CAPZA2P47755 286 aa12.54□□□□□ -0.4
COL13A1-204ENST00000398975 SLC9A3P48764 834 aa12.54□□□□□ -0.4
COL13A1-204ENST00000398975 ERVK-25P63136 954 aa12.54□□□□□ -0.4
COL13A1-204ENST00000398975 SPIBQ01892 262 aa12.54□□□□□ -0.4
COL13A1-204ENST00000398975 NPRL3Q12980 569 aa12.54□□□□□ -0.4
COL13A1-204ENST00000398975 TRIM25Q14258 630 aaKnown RBP12.54□□□□□ -0.4
COL13A1-204ENST00000398975 ZBED5Q49AG3 693 aa12.54□□□□□ -0.4
COL13A1-204ENST00000398975 C10orf128Q5T292 105 aa12.54□□□□□ -0.4
COL13A1-204ENST00000398975 SHEQ5VZ18 495 aa12.54□□□□□ -0.4
COL13A1-204ENST00000398975 SLC25A47Q6Q0C1 308 aa12.54□□□□□ -0.4
COL13A1-204ENST00000398975 FAM122BQ7Z309 247 aa12.54□□□□□ -0.4
COL13A1-204ENST00000398975 PIWIL3Q7Z3Z3 882 aaKnown RBP12.54□□□□□ -0.4
COL13A1-204ENST00000398975 YTHDF3Q7Z739 585 aaKnown RBP12.54□□□□□ -0.4
COL13A1-204ENST00000398975 ZER1Q7Z7L7 766 aa12.54□□□□□ -0.4
COL13A1-204ENST00000398975 ZNF584Q8IVC4 421 aa12.54□□□□□ -0.4
COL13A1-204ENST00000398975 ZDHHC21Q8IVQ6 265 aa12.54□□□□□ -0.4
COL13A1-204ENST00000398975 ARHGAP24Q8N264 748 aa12.54□□□□□ -0.4
COL13A1-204ENST00000398975 SLC22A24Q8N4F4 322 aa12.54□□□□□ -0.4
COL13A1-204ENST00000398975 NABP1Q96AH0 204 aa12.54□□□□□ -0.4
COL13A1-204ENST00000398975 SLC7A6OSQ96CW6 309 aaPredicted RBP12.54□□□□□ -0.4
COL13A1-204ENST00000398975 CXorf56Q9H5V9 222 aa12.54□□□□□ -0.4
COL13A1-204ENST00000398975 VNN3Q9NY84 501 aa12.54□□□□□ -0.4
COL13A1-204ENST00000398975 GDF2Q9UK05 429 aaPredicted RBP12.54□□□□□ -0.4
COL13A1-204ENST00000398975 TRIM64A6NGJ6 449 aa12.53□□□□□ -0.4
COL13A1-204ENST00000398975 TRIM64BA6NI03 449 aa12.53□□□□□ -0.4
COL13A1-204ENST00000398975 CENPBD1B2RD01 187 aa12.53□□□□□ -0.4
COL13A1-204ENST00000398975 H7C1C5 153 aa12.53□□□□□ -0.4
COL13A1-204ENST00000398975 IMPA2O14732 288 aa12.53□□□□□ -0.4
COL13A1-204ENST00000398975 ACOT8O14734 319 aa12.53□□□□□ -0.4
COL13A1-204ENST00000398975 TMCC2O75069 709 aa12.53□□□□□ -0.4
COL13A1-204ENST00000398975 GADD45GO95257 159 aa12.53□□□□□ -0.4
COL13A1-204ENST00000398975 IGHV4-39P01824 125 aa12.53□□□□□ -0.4
COL13A1-204ENST00000398975 FABP3P05413 133 aa12.53□□□□□ -0.4
COL13A1-204ENST00000398975 CD99P14209 185 aa12.53□□□□□ -0.4
COL13A1-204ENST00000398975 RRM2P31350 389 aa12.53□□□□□ -0.4
COL13A1-204ENST00000398975 ARR3P36575 388 aa12.53□□□□□ -0.4
COL13A1-204ENST00000398975 ACVR1BP36896 505 aa12.53□□□□□ -0.4
COL13A1-204ENST00000398975 GIPRP48546 466 aa12.53□□□□□ -0.4
COL13A1-204ENST00000398975 FABP6P51161 128 aa12.53□□□□□ -0.4
COL13A1-204ENST00000398975 ATP5J2P56134 94 aa12.53□□□□□ -0.4
COL13A1-204ENST00000398975 LCN6P62502 163 aa12.53□□□□□ -0.4
COL13A1-204ENST00000398975 MSMPQ1L6U9 139 aa12.53□□□□□ -0.4
COL13A1-204ENST00000398975 GSG1Q2KHT4 349 aa12.53□□□□□ -0.4
COL13A1-204ENST00000398975 PRSS57Q6UWY2 283 aa12.53□□□□□ -0.4
COL13A1-204ENST00000398975 CCDC36Q8IYA8 594 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms