RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 PLEKHN1Q494U1 663 aaPredicted RBP17.34■□□□□ 0.37
PDLIM2-205ENST00000397761 PROKR2Q8NFJ6 384 aa17.34■□□□□ 0.37
PDLIM2-205ENST00000397761 OR51L1Q8NGJ5 315 aa17.34■□□□□ 0.37
PDLIM2-205ENST00000397761 OR13F1Q8NGS4 319 aa17.34■□□□□ 0.37
PDLIM2-205ENST00000397761 TMIGD2Q96BF3 282 aa17.34■□□□□ 0.37
PDLIM2-205ENST00000397761 ZMYND19Q96E35 227 aaPredicted RBP17.34■□□□□ 0.37
PDLIM2-205ENST00000397761 RACGAP1Q9H0H5 632 aa17.34■□□□□ 0.37
PDLIM2-205ENST00000397761 INPP5EQ9NRR6 644 aa17.34■□□□□ 0.37
PDLIM2-205ENST00000397761 TUBD1Q9UJT1 453 aa17.34■□□□□ 0.37
PDLIM2-205ENST00000397761 IGKV3D-15A0A087WSY6 115 aa17.33■□□□□ 0.37
PDLIM2-205ENST00000397761 TMEM129A0AVI4 362 aa17.33■□□□□ 0.37
PDLIM2-205ENST00000397761 ZNF99A8MXY4 864 aaPredicted RBP17.33■□□□□ 0.37
PDLIM2-205ENST00000397761 ZNF432O94892 652 aa17.33■□□□□ 0.37
PDLIM2-205ENST00000397761 INMTO95050 263 aa17.33■□□□□ 0.37
PDLIM2-205ENST00000397761 CTLA4P16410 223 aa17.33■□□□□ 0.37
PDLIM2-205ENST00000397761 CRABP1P29762 137 aa17.33■□□□□ 0.37
PDLIM2-205ENST00000397761 PYCR1P32322 319 aa17.33■□□□□ 0.37
PDLIM2-205ENST00000397761 TTKP33981 857 aa17.33■□□□□ 0.37
PDLIM2-205ENST00000397761 ETV1P50549 477 aa17.33■□□□□ 0.37
PDLIM2-205ENST00000397761 BLVRAP53004 296 aa17.33■□□□□ 0.37
PDLIM2-205ENST00000397761 RAB39AQ14964 217 aa17.33■□□□□ 0.37
PDLIM2-205ENST00000397761 FCRLAQ7L513 359 aa17.33■□□□□ 0.37
PDLIM2-205ENST00000397761 SHFQ7M4L6 423 aa17.33■□□□□ 0.37
PDLIM2-205ENST00000397761 NANOGP1Q8N7R0 232 aa17.33■□□□□ 0.37
PDLIM2-205ENST00000397761 RNF128Q8TEB7 428 aa17.33■□□□□ 0.37
PDLIM2-205ENST00000397761 RORBQ92753 470 aa17.33■□□□□ 0.37
PDLIM2-205ENST00000397761 CNN2Q99439 309 aaKnown RBP17.33■□□□□ 0.37
PDLIM2-205ENST00000397761 EMC6Q9BV81 110 aa17.33■□□□□ 0.37
PDLIM2-205ENST00000397761 PRDM14Q9GZV8 571 aa17.33■□□□□ 0.37
PDLIM2-205ENST00000397761 EXO5Q9H790 373 aa17.33■□□□□ 0.37
PDLIM2-205ENST00000397761 SRA1Q9HD15 236 aaKnown RBP17.33■□□□□ 0.37
PDLIM2-205ENST00000397761 NDUFA13Q9P0J0 144 aa17.33■□□□□ 0.37
PDLIM2-205ENST00000397761 CLEC2DQ9UHP7 191 aa17.33■□□□□ 0.37
PDLIM2-205ENST00000397761 ING1Q9UK53 422 aaPredicted RBP17.33■□□□□ 0.37
PDLIM2-205ENST00000397761 FLVCR1Q9Y5Y0 555 aa17.33■□□□□ 0.37
PDLIM2-205ENST00000397761 FREM1Q5H8C1 2179 aa17.33■□□□□ 0.36
PDLIM2-205ENST00000397761 BOD1L1Q8NFC6 3051 aa17.33■□□□□ 0.36
PDLIM2-205ENST00000397761 NCOA6Q14686 2063 aaPredicted RBP17.33■□□□□ 0.36
PDLIM2-205ENST00000397761 SMIM31A0A1B0GVY4 71 aa17.32■□□□□ 0.36
PDLIM2-205ENST00000397761 NPIPA2E9PIF3 369 aa17.32■□□□□ 0.36
PDLIM2-205ENST00000397761 NPIPA3F8WFD2 350 aa17.32■□□□□ 0.36
PDLIM2-205ENST00000397761 IGHG1P01857 330 aa17.32■□□□□ 0.36
PDLIM2-205ENST00000397761 LCKP06239 509 aa17.32■□□□□ 0.36
PDLIM2-205ENST00000397761 MYL12AP19105 171 aa17.32■□□□□ 0.36
PDLIM2-205ENST00000397761 ATP6V1E1P36543 226 aa17.32■□□□□ 0.36
PDLIM2-205ENST00000397761 GP2P55259 537 aaKnown RBP17.32■□□□□ 0.36
PDLIM2-205ENST00000397761 SRYQ05066 204 aa17.32■□□□□ 0.36
PDLIM2-205ENST00000397761 LINC00303Q3SY05 128 aa17.32■□□□□ 0.36
PDLIM2-205ENST00000397761 TMEM123Q8N131 208 aa17.32■□□□□ 0.36
PDLIM2-205ENST00000397761 ACBD7Q8N6N7 88 aa17.32■□□□□ 0.36
PDLIM2-205ENST00000397761 ZNF485Q8NCK3 441 aa17.32■□□□□ 0.36
PDLIM2-205ENST00000397761 NOXO1Q8NFA2 376 aa17.32■□□□□ 0.36
PDLIM2-205ENST00000397761 FNDC8Q8TC99 324 aa17.32■□□□□ 0.36
PDLIM2-205ENST00000397761 ROBO4Q8WZ75 1007 aa17.32■□□□□ 0.36
PDLIM2-205ENST00000397761 DOCK7Q96N67 2140 aa17.32■□□□□ 0.36
PDLIM2-205ENST00000397761 ZNF385AQ96PM9 386 aaKnown RBP17.32■□□□□ 0.36
PDLIM2-205ENST00000397761 MND1Q9BWT6 205 aa17.32■□□□□ 0.36
PDLIM2-205ENST00000397761 RBM38Q9H0Z9 239 aaKnown RBP17.32■□□□□ 0.36
PDLIM2-205ENST00000397761 ERVK13-1Q9NX77 482 aa17.32■□□□□ 0.36
PDLIM2-205ENST00000397761 RCE1Q9Y256 329 aa17.32■□□□□ 0.36
PDLIM2-205ENST00000397761 ERGIC3Q9Y282 383 aa17.32■□□□□ 0.36
PDLIM2-205ENST00000397761 SLC16A7O60669 478 aa17.31■□□□□ 0.36
PDLIM2-205ENST00000397761 TFP02787 698 aa17.31■□□□□ 0.36
PDLIM2-205ENST00000397761 PTGS2P35354 604 aa17.31■□□□□ 0.36
PDLIM2-205ENST00000397761 ZNF133P52736 654 aaPredicted RBP17.31■□□□□ 0.36
PDLIM2-205ENST00000397761 CLDN17P56750 224 aa17.31■□□□□ 0.36
PDLIM2-205ENST00000397761 ACTC1P68032 377 aa17.31■□□□□ 0.36
PDLIM2-205ENST00000397761 ACTA1P68133 377 aa17.31■□□□□ 0.36
PDLIM2-205ENST00000397761 THEM4Q5T1C6 240 aa17.31■□□□□ 0.36
PDLIM2-205ENST00000397761 ZNF367Q7RTV3 350 aa17.31■□□□□ 0.36
PDLIM2-205ENST00000397761 GPR141Q7Z602 305 aa17.31■□□□□ 0.36
PDLIM2-205ENST00000397761 TIGD4Q8IY51 512 aa17.31■□□□□ 0.36
PDLIM2-205ENST00000397761 SYT14Q8NB59 555 aa17.31■□□□□ 0.36
PDLIM2-205ENST00000397761 OR6K6Q8NGW6 343 aa17.31■□□□□ 0.36
PDLIM2-205ENST00000397761 PNPLA2Q96AD5 504 aa17.31■□□□□ 0.36
PDLIM2-205ENST00000397761 COG8Q96MW5 612 aa17.31■□□□□ 0.36
PDLIM2-205ENST00000397761 OR2M2Q96R28 347 aa17.31■□□□□ 0.36
PDLIM2-205ENST00000397761 FAM192AQ9GZU8 254 aa17.31■□□□□ 0.36
PDLIM2-205ENST00000397761 MCTS1Q9ULC4 181 aaKnown RBP17.31■□□□□ 0.36
PDLIM2-205ENST00000397761 ITPR1Q14643 2758 aa17.31■□□□□ 0.36
PDLIM2-205ENST00000397761 CACNA1CQ13936 2221 aa17.31■□□□□ 0.36
PDLIM2-205ENST00000397761 C12orf71A8MTZ7 269 aa17.31■□□□□ 0.36
PDLIM2-205ENST00000397761 WISP2O76076 250 aa17.31■□□□□ 0.36
PDLIM2-205ENST00000397761 CRYABP02511 175 aaKnown RBP17.31■□□□□ 0.36
PDLIM2-205ENST00000397761 OR2T7P0C7T2 308 aa17.31■□□□□ 0.36
PDLIM2-205ENST00000397761 RASGEF1BQ0VAM2 473 aa17.31■□□□□ 0.36
PDLIM2-205ENST00000397761 CAMK2DQ13557 499 aa17.31■□□□□ 0.36
PDLIM2-205ENST00000397761 FOXB2Q5VYV0 432 aa17.31■□□□□ 0.36
PDLIM2-205ENST00000397761 DNM1P34Q6PK57 102 aa17.31■□□□□ 0.36
PDLIM2-205ENST00000397761 ADGRE4PQ86SQ3 457 aa17.31■□□□□ 0.36
PDLIM2-205ENST00000397761 ZNF511Q8NB15 262 aa17.31■□□□□ 0.36
PDLIM2-205ENST00000397761 OR2T27Q8NH04 317 aa17.31■□□□□ 0.36
PDLIM2-205ENST00000397761 TMEM45BQ96B21 275 aa17.31■□□□□ 0.36
PDLIM2-205ENST00000397761 RBP7Q96R05 134 aa17.31■□□□□ 0.36
PDLIM2-205ENST00000397761 RNF122Q9H9V4 155 aa17.31■□□□□ 0.36
PDLIM2-205ENST00000397761 ZNF726A6NNF4 738 aa17.3■□□□□ 0.36
PDLIM2-205ENST00000397761 FAM171A2A8MVW0 826 aa17.3■□□□□ 0.36
PDLIM2-205ENST00000397761 AKAP8O43823 692 aaKnown RBP17.3■□□□□ 0.36
PDLIM2-205ENST00000397761 SYNGR4O95473 234 aa17.3■□□□□ 0.36
PDLIM2-205ENST00000397761 MRPL3P09001 348 aaKnown RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms