RNA–Protein interactions for RNA: ENST00000397442.5

CPNE1-203, Transcript of copine 1, humanhuman

TSL 5 BASIC

Gene CPNE1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-203ENST00000397442 PROKR2Q8NFJ6 384 aa24.43■■□□□ 1.5
CPNE1-203ENST00000397442 ACOT13Q9NPJ3 140 aa24.43■■□□□ 1.5
CPNE1-203ENST00000397442 IGKV1D-43A0A0B4J1Z2 117 aa24.43■■□□□ 1.5
CPNE1-203ENST00000397442 SLC16A7O60669 478 aa24.43■■□□□ 1.5
CPNE1-203ENST00000397442 IGHG1P01857 330 aa24.43■■□□□ 1.5
CPNE1-203ENST00000397442 SBK2P0C263 348 aa24.43■■□□□ 1.5
CPNE1-203ENST00000397442 NEDD8Q15843 81 aa24.43■■□□□ 1.5
CPNE1-203ENST00000397442 ETFDHQ16134 617 aa24.43■■□□□ 1.5
CPNE1-203ENST00000397442 HIST3H3Q16695 136 aa24.43■■□□□ 1.5
CPNE1-203ENST00000397442 LCN1P1Q5VSP4 162 aa24.43■■□□□ 1.5
CPNE1-203ENST00000397442 FGD2Q7Z6J4 655 aa24.43■■□□□ 1.5
CPNE1-203ENST00000397442 OR6K6Q8NGW6 343 aa24.43■■□□□ 1.5
CPNE1-203ENST00000397442 FAR1Q8WVX9 515 aa24.43■■□□□ 1.5
CPNE1-203ENST00000397442 ZNF775Q96BV0 537 aaPredicted RBP24.43■■□□□ 1.5
CPNE1-203ENST00000397442 SARAFQ96BY9 339 aa24.43■■□□□ 1.5
CPNE1-203ENST00000397442 GPR137Q96N19 417 aa24.43■■□□□ 1.5
CPNE1-203ENST00000397442 OR2M2Q96R28 347 aa24.43■■□□□ 1.5
CPNE1-203ENST00000397442 IGKV3D-15A0A087WSY6 115 aa24.42■■□□□ 1.5
CPNE1-203ENST00000397442 IGHA1P01876 353 aa24.42■■□□□ 1.5
CPNE1-203ENST00000397442 MRPL3P09001 348 aaKnown RBP24.42■■□□□ 1.5
CPNE1-203ENST00000397442 JUNBP17275 347 aaPredicted RBP24.42■■□□□ 1.5
CPNE1-203ENST00000397442 TBCEQ15813 527 aaPredicted RBP24.42■■□□□ 1.5
CPNE1-203ENST00000397442 RNLSQ5VYX0 342 aa24.42■■□□□ 1.5
CPNE1-203ENST00000397442 FAM180AQ6UWF9 173 aa24.42■■□□□ 1.5
CPNE1-203ENST00000397442 ADGRE4PQ86SQ3 457 aa24.42■■□□□ 1.5
CPNE1-203ENST00000397442 TMEM123Q8N131 208 aa24.42■■□□□ 1.5
CPNE1-203ENST00000397442 SVOPQ8N4V2 548 aa24.42■■□□□ 1.5
CPNE1-203ENST00000397442 ZNF511Q8NB15 262 aa24.42■■□□□ 1.5
CPNE1-203ENST00000397442 ZNF649Q9BS31 505 aa24.42■■□□□ 1.5
CPNE1-203ENST00000397442 RERGLQ9H628 205 aa24.42■■□□□ 1.5
CPNE1-203ENST00000397442 CLEC2DQ9UHP7 191 aa24.42■■□□□ 1.5
CPNE1-203ENST00000397442 ZNF726A6NNF4 738 aa24.41■■□□□ 1.5
CPNE1-203ENST00000397442 ATP6V1E1P36543 226 aa24.41■■□□□ 1.5
CPNE1-203ENST00000397442 CARD17Q5XLA6 110 aa24.41■■□□□ 1.5
CPNE1-203ENST00000397442 CHMP1BQ7LBR1 199 aa24.41■■□□□ 1.5
CPNE1-203ENST00000397442 JAM3Q9BX67 310 aa24.41■■□□□ 1.5
CPNE1-203ENST00000397442 RACGAP1Q9H0H5 632 aa24.41■■□□□ 1.5
CPNE1-203ENST00000397442 OR14I1A6ND48 311 aa24.4■■□□□ 1.5
CPNE1-203ENST00000397442 CRABP1P29762 137 aa24.4■■□□□ 1.5
CPNE1-203ENST00000397442 ETV1P50549 477 aa24.4■■□□□ 1.5
CPNE1-203ENST00000397442 CLRN1P58418 232 aa24.4■■□□□ 1.5
CPNE1-203ENST00000397442 POU4F2Q12837 409 aa24.4■■□□□ 1.5
CPNE1-203ENST00000397442 CENPBD1B2RD01 187 aa24.4■■□□□ 1.5
CPNE1-203ENST00000397442 GPANK1O95872 356 aa24.4■■□□□ 1.5
CPNE1-203ENST00000397442 PTHP01270 115 aa24.4■■□□□ 1.5
CPNE1-203ENST00000397442 TFP02787 698 aa24.4■■□□□ 1.5
CPNE1-203ENST00000397442 SELENOPP49908 381 aa24.4■■□□□ 1.5
CPNE1-203ENST00000397442 THEM4Q5T1C6 240 aa24.4■■□□□ 1.5
CPNE1-203ENST00000397442 POMGNT2Q8NAT1 580 aa24.4■■□□□ 1.5
CPNE1-203ENST00000397442 SMAP2Q8WU79 429 aaPredicted RBP24.4■■□□□ 1.5
CPNE1-203ENST00000397442 CNN2Q99439 309 aaKnown RBP24.4■■□□□ 1.5
CPNE1-203ENST00000397442 KLHL9Q9P2J3 617 aa24.4■■□□□ 1.5
CPNE1-203ENST00000397442 ZMIZ1Q9ULJ6 1067 aa24.4■■□□□ 1.5
CPNE1-203ENST00000397442 RCE1Q9Y256 329 aa24.4■■□□□ 1.5
CPNE1-203ENST00000397442 ZNF175Q9Y473 711 aa24.4■■□□□ 1.5
CPNE1-203ENST00000397442 TLN1Q9Y490 2541 aaKnown RBP24.4■■□□□ 1.5
CPNE1-203ENST00000397442 DPPA5A6NC42 116 aa24.39■■□□□ 1.49
CPNE1-203ENST00000397442 SELENOFO60613 162 aa24.39■■□□□ 1.49
CPNE1-203ENST00000397442 TGM6O95932 706 aa24.39■■□□□ 1.49
CPNE1-203ENST00000397442 LIMS3P0CW19 117 aa24.39■■□□□ 1.49
CPNE1-203ENST00000397442 LIMS4P0CW20 117 aa24.39■■□□□ 1.49
CPNE1-203ENST00000397442 TMEM54Q969K7 222 aa24.39■■□□□ 1.49
CPNE1-203ENST00000397442 MUL1Q969V5 352 aa24.39■■□□□ 1.49
CPNE1-203ENST00000397442 TMIGD2Q96BF3 282 aa24.39■■□□□ 1.49
CPNE1-203ENST00000397442 RBP7Q96R05 134 aa24.39■■□□□ 1.49
CPNE1-203ENST00000397442 MARCH7Q9H992 704 aa24.39■■□□□ 1.49
CPNE1-203ENST00000397442 FOXD3Q9UJU5 478 aaPredicted RBP24.39■■□□□ 1.49
CPNE1-203ENST00000397442 LCKP06239 509 aa24.38■■□□□ 1.49
CPNE1-203ENST00000397442 PTGS2P35354 604 aa24.38■■□□□ 1.49
CPNE1-203ENST00000397442 NAA10P41227 235 aaPredicted RBP24.38■■□□□ 1.49
CPNE1-203ENST00000397442 DOC2BQ14184 412 aa24.38■■□□□ 1.49
CPNE1-203ENST00000397442 LRFN4Q6PJG9 635 aa24.38■■□□□ 1.49
CPNE1-203ENST00000397442 SATL1Q86VE3 508 aa24.38■■□□□ 1.49
CPNE1-203ENST00000397442 TIGD4Q8IY51 512 aa24.38■■□□□ 1.49
CPNE1-203ENST00000397442 CISD2Q8N5K1 135 aaKnown RBP24.38■■□□□ 1.49
CPNE1-203ENST00000397442 TMEM45BQ96B21 275 aa24.38■■□□□ 1.49
CPNE1-203ENST00000397442 PRRG4Q9BZD6 226 aa24.38■■□□□ 1.49
CPNE1-203ENST00000397442 BCO1Q9HAY6 547 aa24.38■■□□□ 1.49
CPNE1-203ENST00000397442 VCX3AQ9NNX9 186 aa24.38■■□□□ 1.49
CPNE1-203ENST00000397442 CLCF1Q9UBD9 225 aa24.38■■□□□ 1.49
CPNE1-203ENST00000397442 COA3Q9Y2R0 106 aaPredicted RBP24.38■■□□□ 1.49
CPNE1-203ENST00000397442 SVILO95425 2214 aa24.37■■□□□ 1.49
CPNE1-203ENST00000397442 TVP23AA6NH52 213 aa24.37■■□□□ 1.49
CPNE1-203ENST00000397442 SLC22A20A6NK97 555 aa24.37■■□□□ 1.49
CPNE1-203ENST00000397442 C12orf71A8MTZ7 269 aa24.37■■□□□ 1.49
CPNE1-203ENST00000397442 INMTO95050 263 aa24.37■■□□□ 1.49
CPNE1-203ENST00000397442 KRTCAP3Q53RY4 240 aa24.37■■□□□ 1.49
CPNE1-203ENST00000397442 PHYHD1Q5SRE7 291 aa24.37■■□□□ 1.49
CPNE1-203ENST00000397442 UBE2UQ5VVX9 321 aa24.37■■□□□ 1.49
CPNE1-203ENST00000397442 OR5M9Q8NGP3 310 aa24.37■■□□□ 1.49
CPNE1-203ENST00000397442 MCHR2Q969V1 340 aa24.37■■□□□ 1.49
CPNE1-203ENST00000397442 FOXN4Q96NZ1 517 aa24.37■■□□□ 1.49
CPNE1-203ENST00000397442 RNF122Q9H9V4 155 aa24.37■■□□□ 1.49
CPNE1-203ENST00000397442 BATF3Q9NR55 127 aa24.37■■□□□ 1.49
CPNE1-203ENST00000397442 ERVK13-1Q9NX77 482 aa24.37■■□□□ 1.49
CPNE1-203ENST00000397442 LSM2Q9Y333 95 aaKnown RBP24.37■■□□□ 1.49
CPNE1-203ENST00000397442 EXOSC1Q9Y3B2 195 aaKnown RBP24.37■■□□□ 1.49
CPNE1-203ENST00000397442 AKAP8O43823 692 aaKnown RBP24.37■■□□□ 1.49
CPNE1-203ENST00000397442 TDGF1P3P51864 188 aa24.37■■□□□ 1.49
CPNE1-203ENST00000397442 HCCSP53701 268 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms