RNA–Protein interactions for RNA: ENST00000397396.5

TSPAN4-202, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,332 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-202ENST00000397396 RIPPLY2Q5TAB7 128 aa20.89■□□□□ 0.93
TSPAN4-202ENST00000397396 CARD17Q5XLA6 110 aa20.89■□□□□ 0.93
TSPAN4-202ENST00000397396 ZBTB46Q86UZ6 589 aa20.89■□□□□ 0.93
TSPAN4-202ENST00000397396 DOLPP1Q86YN1 238 aa20.89■□□□□ 0.93
TSPAN4-202ENST00000397396 C20orf196Q8IYI0 205 aa20.89■□□□□ 0.93
TSPAN4-202ENST00000397396 GPR137CQ8N3F9 429 aa20.89■□□□□ 0.93
TSPAN4-202ENST00000397396 C9orf106Q8NAJ2 232 aa20.89■□□□□ 0.93
TSPAN4-202ENST00000397396 POMGNT2Q8NAT1 580 aa20.89■□□□□ 0.93
TSPAN4-202ENST00000397396 OR9Q1Q8NGQ5 310 aa20.89■□□□□ 0.93
TSPAN4-202ENST00000397396 IPCEF1Q8WWN9 437 aaPredicted RBP20.89■□□□□ 0.93
TSPAN4-202ENST00000397396 APH1AQ96BI3 265 aa20.89■□□□□ 0.93
TSPAN4-202ENST00000397396 LINC00470Q9BZP3 86 aa20.89■□□□□ 0.93
TSPAN4-202ENST00000397396 NUAK2Q9H093 628 aa20.89■□□□□ 0.93
TSPAN4-202ENST00000397396 MED20Q9H944 212 aa20.89■□□□□ 0.93
TSPAN4-202ENST00000397396 HAO2Q9NYQ3 351 aa20.89■□□□□ 0.93
TSPAN4-202ENST00000397396 CNOT2Q9NZN8 540 aaKnown RBP20.89■□□□□ 0.93
TSPAN4-202ENST00000397396 FOXD3Q9UJU5 478 aaPredicted RBP20.89■□□□□ 0.93
TSPAN4-202ENST00000397396 FAM215AQ9Y5M1 114 aa20.89■□□□□ 0.93
TSPAN4-202ENST00000397396 SLC16A7O60669 478 aa20.88■□□□□ 0.93
TSPAN4-202ENST00000397396 GLCEO94923 617 aa20.88■□□□□ 0.93
TSPAN4-202ENST00000397396 PIPP12273 146 aaPredicted RBP20.88■□□□□ 0.93
TSPAN4-202ENST00000397396 MTNR1AP48039 350 aa20.88■□□□□ 0.93
TSPAN4-202ENST00000397396 ZNF133P52736 654 aaPredicted RBP20.88■□□□□ 0.93
TSPAN4-202ENST00000397396 GABARAPL2P60520 117 aa20.88■□□□□ 0.93
TSPAN4-202ENST00000397396 GLO1Q04760 184 aa20.88■□□□□ 0.93
TSPAN4-202ENST00000397396 ZNF91Q05481 1191 aa20.88■□□□□ 0.93
TSPAN4-202ENST00000397396 STK11Q15831 433 aa20.88■□□□□ 0.93
TSPAN4-202ENST00000397396 KLHL22Q53GT1 634 aa20.88■□□□□ 0.93
TSPAN4-202ENST00000397396 ABHD12BQ7Z5M8 362 aaPredicted RBP20.88■□□□□ 0.93
TSPAN4-202ENST00000397396 ZNF100Q8IYN0 542 aa20.88■□□□□ 0.93
TSPAN4-202ENST00000397396 BBS1Q8NFJ9 593 aa20.88■□□□□ 0.93
TSPAN4-202ENST00000397396 OR6K3Q8NGY3 331 aa20.88■□□□□ 0.93
TSPAN4-202ENST00000397396 HCAR1Q9BXC0 346 aa20.88■□□□□ 0.93
TSPAN4-202ENST00000397396 ULBP2Q9BZM5 246 aa20.88■□□□□ 0.93
TSPAN4-202ENST00000397396 SLCO5A1Q9H2Y9 848 aa20.88■□□□□ 0.93
TSPAN4-202ENST00000397396 AASSQ9UDR5 926 aa20.88■□□□□ 0.93
TSPAN4-202ENST00000397396 CLEC4AQ9UMR7 237 aa20.88■□□□□ 0.93
TSPAN4-202ENST00000397396 SVILO95425 2214 aa20.88■□□□□ 0.93
TSPAN4-202ENST00000397396 ATMQ13315 3056 aa20.88■□□□□ 0.93
TSPAN4-202ENST00000397396 DBTP11182 482 aaKnown RBP20.87■□□□□ 0.93
TSPAN4-202ENST00000397396 CRHBPP24387 322 aa20.87■□□□□ 0.93
TSPAN4-202ENST00000397396 GUSBP1Q15486 140 aa20.87■□□□□ 0.93
TSPAN4-202ENST00000397396 SMN1Q16637 294 aaKnown RBP20.87■□□□□ 0.93
TSPAN4-202ENST00000397396 RTL6Q6ICC9 239 aa20.87■□□□□ 0.93
TSPAN4-202ENST00000397396 LAIR2Q6ISS4 152 aa20.87■□□□□ 0.93
TSPAN4-202ENST00000397396 PLXDC2Q6UX71 529 aa20.87■□□□□ 0.93
TSPAN4-202ENST00000397396 BCDIN3DQ7Z5W3 292 aaKnown RBP20.87■□□□□ 0.93
TSPAN4-202ENST00000397396 OR6V1Q8N148 313 aa20.87■□□□□ 0.93
TSPAN4-202ENST00000397396 ZNF775Q96BV0 537 aaPredicted RBP20.87■□□□□ 0.93
TSPAN4-202ENST00000397396 NMD3Q96D46 503 aaKnown RBP20.87■□□□□ 0.93
TSPAN4-202ENST00000397396 TEAD3Q99594 435 aa20.87■□□□□ 0.93
TSPAN4-202ENST00000397396 SRA1Q9HD15 236 aaKnown RBP20.87■□□□□ 0.93
TSPAN4-202ENST00000397396 B9D1Q9UPM9 204 aa20.87■□□□□ 0.93
TSPAN4-202ENST00000397396 PCDHGB5Q9Y5G0 923 aa20.87■□□□□ 0.93
TSPAN4-202ENST00000397396 KRT33AO76009 404 aa20.86■□□□□ 0.93
TSPAN4-202ENST00000397396 ZNF84P51523 738 aa20.86■□□□□ 0.93
TSPAN4-202ENST00000397396 NUDT6P53370 316 aa20.86■□□□□ 0.93
TSPAN4-202ENST00000397396 RAB40BQ12829 278 aa20.86■□□□□ 0.93
TSPAN4-202ENST00000397396 GGTLC2Q14390 218 aa20.86■□□□□ 0.93
TSPAN4-202ENST00000397396 C10orf128Q5T292 105 aa20.86■□□□□ 0.93
TSPAN4-202ENST00000397396 TMEM211Q6ICI0 200 aa20.86■□□□□ 0.93
TSPAN4-202ENST00000397396 ZNF540Q8NDQ6 660 aa20.86■□□□□ 0.93
TSPAN4-202ENST00000397396 OR6K6Q8NGW6 343 aa20.86■□□□□ 0.93
TSPAN4-202ENST00000397396 MCHR2Q969V1 340 aa20.86■□□□□ 0.93
TSPAN4-202ENST00000397396 TTYH2Q9BSA4 534 aa20.86■□□□□ 0.93
TSPAN4-202ENST00000397396 MRPS18AQ9NVS2 196 aaKnown RBP20.86■□□□□ 0.93
TSPAN4-202ENST00000397396 PCDHGB1Q9Y5G3 927 aa20.86■□□□□ 0.93
TSPAN4-202ENST00000397396 BSNQ9UPA5 3926 aa20.86■□□□□ 0.93
TSPAN4-202ENST00000397396 GTF3C1Q12789 2109 aa20.86■□□□□ 0.93
TSPAN4-202ENST00000397396 CACNA1BQ00975 2339 aa20.85■□□□□ 0.93
TSPAN4-202ENST00000397396 IGLV1-36A0A0B4J1U3 117 aa20.85■□□□□ 0.93
TSPAN4-202ENST00000397396 CCDC182A6NF36 153 aa20.85■□□□□ 0.93
TSPAN4-202ENST00000397396 E9PLN8 166 aa20.85■□□□□ 0.93
TSPAN4-202ENST00000397396 XPNPEP2O43895 674 aa20.85■□□□□ 0.93
TSPAN4-202ENST00000397396 MRPS14O60783 128 aaKnown RBP20.85■□□□□ 0.93
TSPAN4-202ENST00000397396 GYPBP06028 91 aa20.85■□□□□ 0.93
TSPAN4-202ENST00000397396 QDPRP09417 244 aa20.85■□□□□ 0.93
TSPAN4-202ENST00000397396 TMIGD3P0DMS9 266 aaPredicted RBP20.85■□□□□ 0.93
TSPAN4-202ENST00000397396 CLUP10909 449 aa20.85■□□□□ 0.93
TSPAN4-202ENST00000397396 CTLA4P16410 223 aa20.85■□□□□ 0.93
TSPAN4-202ENST00000397396 ATP6V1E1P36543 226 aa20.85■□□□□ 0.93
TSPAN4-202ENST00000397396 GUCA1AP43080 201 aaPredicted RBP20.85■□□□□ 0.93
TSPAN4-202ENST00000397396 OR3A2P47893 321 aa20.85■□□□□ 0.93
TSPAN4-202ENST00000397396 GCNT2Q8N0V5 402 aa20.85■□□□□ 0.93
TSPAN4-202ENST00000397396 MYDGFQ969H8 173 aa20.85■□□□□ 0.93
TSPAN4-202ENST00000397396 RNFT2Q96EX2 444 aa20.85■□□□□ 0.93
TSPAN4-202ENST00000397396 TSSK2Q96PF2 358 aa20.85■□□□□ 0.93
TSPAN4-202ENST00000397396 VKORC1Q9BQB6 163 aa20.85■□□□□ 0.93
TSPAN4-202ENST00000397396 SFXN3Q9BWM7 321 aa20.85■□□□□ 0.93
TSPAN4-202ENST00000397396 RERGLQ9H628 205 aa20.85■□□□□ 0.93
TSPAN4-202ENST00000397396 ZNF696Q9H7X3 374 aa20.85■□□□□ 0.93
TSPAN4-202ENST00000397396 PSORS1C1Q9UIG5 152 aa20.85■□□□□ 0.93
TSPAN4-202ENST00000397396 CNOT4O95628 575 aaKnown RBP20.84■□□□□ 0.93
TSPAN4-202ENST00000397396 FADS2O95864 444 aaKnown RBP20.84■□□□□ 0.93
TSPAN4-202ENST00000397396 EEF1B2P24534 225 aaKnown RBP20.84■□□□□ 0.93
TSPAN4-202ENST00000397396 GSTT1P30711 240 aa20.84■□□□□ 0.93
TSPAN4-202ENST00000397396 CEACAM8P31997 349 aaPredicted RBP20.84■□□□□ 0.93
TSPAN4-202ENST00000397396 SLC15A1P46059 708 aa20.84■□□□□ 0.93
TSPAN4-202ENST00000397396 FMODQ06828 376 aa20.84■□□□□ 0.93
TSPAN4-202ENST00000397396 SLC25A47Q6Q0C1 308 aa20.84■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms