RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 MRPL22Q9NWU5 206 aaKnown RBP9.28□□□□□ -0.92
NUP98-205ENST00000397007 TMCC3Q9ULS5 477 aa9.28□□□□□ -0.92
NUP98-205ENST00000397007 GPR52Q9Y2T5 361 aa9.28□□□□□ -0.92
NUP98-205ENST00000397007 NOSIPQ9Y314 301 aaKnown RBP9.28□□□□□ -0.92
NUP98-205ENST00000397007 EMC9Q9Y3B6 208 aa9.28□□□□□ -0.92
NUP98-205ENST00000397007 A6NIZ1 184 aa9.28□□□□□ -0.92
NUP98-205ENST00000397007 SLC6A6P31641 620 aa9.28□□□□□ -0.92
NUP98-205ENST00000397007 BIDP55957 195 aa9.28□□□□□ -0.92
NUP98-205ENST00000397007 RAP1BP61224 184 aa9.28□□□□□ -0.92
NUP98-205ENST00000397007 RAP1AP62834 184 aa9.28□□□□□ -0.92
NUP98-205ENST00000397007 MRPS34P82930 218 aaKnown RBP9.28□□□□□ -0.92
NUP98-205ENST00000397007 NPRL3Q12980 569 aa9.28□□□□□ -0.92
NUP98-205ENST00000397007 SLC36A3Q495N2 470 aa9.28□□□□□ -0.92
NUP98-205ENST00000397007 OR6V1Q8N148 313 aa9.28□□□□□ -0.92
NUP98-205ENST00000397007 OR51A7Q8NH64 312 aa9.28□□□□□ -0.92
NUP98-205ENST00000397007 FNDC8Q8TC99 324 aa9.28□□□□□ -0.92
NUP98-205ENST00000397007 RASD2Q96D21 266 aa9.28□□□□□ -0.92
NUP98-205ENST00000397007 POLDIP3Q9BY77 421 aaKnown RBP9.28□□□□□ -0.92
NUP98-205ENST00000397007 SLC17A5Q9NRA2 495 aa9.28□□□□□ -0.92
NUP98-205ENST00000397007 TMEM38BQ9NVV0 291 aa9.28□□□□□ -0.92
NUP98-205ENST00000397007 HAO2Q9NYQ3 351 aa9.28□□□□□ -0.92
NUP98-205ENST00000397007 CLEC4AQ9UMR7 237 aa9.28□□□□□ -0.92
NUP98-205ENST00000397007 NKX2-6A6NCS4 301 aa9.28□□□□□ -0.92
NUP98-205ENST00000397007 ZNF99A8MXY4 864 aaPredicted RBP9.28□□□□□ -0.92
NUP98-205ENST00000397007 BCL10O95999 233 aa9.28□□□□□ -0.92
NUP98-205ENST00000397007 ZNF43P17038 809 aa9.28□□□□□ -0.92
NUP98-205ENST00000397007 GGT2P36268 569 aa9.28□□□□□ -0.92
NUP98-205ENST00000397007 POLR2IP36954 125 aaKnown RBP9.28□□□□□ -0.92
NUP98-205ENST00000397007 CASP6P55212 293 aa9.28□□□□□ -0.92
NUP98-205ENST00000397007 SNRPGP62308 76 aaKnown RBP9.28□□□□□ -0.92
NUP98-205ENST00000397007 MELKQ14680 651 aa9.28□□□□□ -0.92
NUP98-205ENST00000397007 ZDHHC13Q8IUH4 622 aa9.28□□□□□ -0.92
NUP98-205ENST00000397007 CBR4Q8N4T8 237 aa9.28□□□□□ -0.92
NUP98-205ENST00000397007 C9orf16Q9BUW7 83 aa9.28□□□□□ -0.92
NUP98-205ENST00000397007 HDHD5Q9BXW7 423 aa9.28□□□□□ -0.92
NUP98-205ENST00000397007 FKBP14Q9NWM8 211 aa9.28□□□□□ -0.92
NUP98-205ENST00000397007 NPAP1Q9NZP6 1156 aa9.28□□□□□ -0.92
NUP98-205ENST00000397007 PROCRQ9UNN8 238 aa9.28□□□□□ -0.92
NUP98-205ENST00000397007 TRIM64A6NGJ6 449 aa9.27□□□□□ -0.92
NUP98-205ENST00000397007 ERICH4A6NGS2 130 aa9.27□□□□□ -0.92
NUP98-205ENST00000397007 DEFB108AA8MXU0 73 aa9.27□□□□□ -0.92
NUP98-205ENST00000397007 CTLA4P16410 223 aa9.27□□□□□ -0.92
NUP98-205ENST00000397007 ZNF14P17017 642 aaPredicted RBP9.27□□□□□ -0.92
NUP98-205ENST00000397007 CTXN1P60606 82 aa9.27□□□□□ -0.92
NUP98-205ENST00000397007 ERVK-25P63136 954 aa9.27□□□□□ -0.92
NUP98-205ENST00000397007 ITGADQ13349 1161 aa9.27□□□□□ -0.92
NUP98-205ENST00000397007 IGFN1Q86VF2 1251 aa9.27□□□□□ -0.92
NUP98-205ENST00000397007 CXorf67Q86X51 503 aaPredicted RBP9.27□□□□□ -0.92
NUP98-205ENST00000397007 GPR137CQ8N3F9 429 aa9.27□□□□□ -0.92
NUP98-205ENST00000397007 SLC26A10Q8NG04 563 aa9.27□□□□□ -0.92
NUP98-205ENST00000397007 KLHL21Q9UJP4 597 aa9.27□□□□□ -0.92
NUP98-205ENST00000397007 SLC2A10O95528 541 aa9.27□□□□□ -0.93
NUP98-205ENST00000397007 PPP1R3DO95685 299 aa9.27□□□□□ -0.93
NUP98-205ENST00000397007 RSPO1Q2MKA7 263 aaPredicted RBP9.27□□□□□ -0.93
NUP98-205ENST00000397007 ZNF684Q5T5D7 378 aa9.27□□□□□ -0.93
NUP98-205ENST00000397007 TMEM225Q6GV28 225 aa9.27□□□□□ -0.93
NUP98-205ENST00000397007 HDDC2Q7Z4H3 204 aa9.27□□□□□ -0.93
NUP98-205ENST00000397007 P2RY8Q86VZ1 359 aa9.27□□□□□ -0.93
NUP98-205ENST00000397007 ZNF295-AS1Q8N0V1 137 aa9.27□□□□□ -0.93
NUP98-205ENST00000397007 FGFBP3Q8TAT2 258 aa9.27□□□□□ -0.93
NUP98-205ENST00000397007 TFAP2CQ92754 450 aa9.27□□□□□ -0.93
NUP98-205ENST00000397007 GTPBP3Q969Y2 492 aaKnown RBP9.27□□□□□ -0.93
NUP98-205ENST00000397007 APH1AQ96BI3 265 aa9.27□□□□□ -0.93
NUP98-205ENST00000397007 USB1Q9BQ65 265 aaKnown RBP9.27□□□□□ -0.93
NUP98-205ENST00000397007 TAS2R16Q9NYV7 291 aa9.27□□□□□ -0.93
NUP98-205ENST00000397007 RRP15Q9Y3B9 282 aaKnown RBP9.27□□□□□ -0.93
NUP98-205ENST00000397007 RNF13O43567 381 aa9.27□□□□□ -0.93
NUP98-205ENST00000397007 SLC43A1O75387 559 aa9.27□□□□□ -0.93
NUP98-205ENST00000397007 PPP3CBP16298 524 aa9.27□□□□□ -0.93
NUP98-205ENST00000397007 SMSP52788 366 aa9.27□□□□□ -0.93
NUP98-205ENST00000397007 ISL1P61371 349 aa9.27□□□□□ -0.93
NUP98-205ENST00000397007 KRR1Q13601 381 aaKnown RBP9.27□□□□□ -0.93
NUP98-205ENST00000397007 FAM27BQ5VT28 67 aa9.27□□□□□ -0.93
NUP98-205ENST00000397007 AAED1Q7RTV5 226 aa9.27□□□□□ -0.93
NUP98-205ENST00000397007 OR2T33Q8NG76 320 aa9.27□□□□□ -0.93
NUP98-205ENST00000397007 LILRB1Q8NHL6 650 aaPredicted RBP9.27□□□□□ -0.93
NUP98-205ENST00000397007 EMC6Q9BV81 110 aa9.27□□□□□ -0.93
NUP98-205ENST00000397007 OBP2BQ9NPH6 170 aa9.27□□□□□ -0.93
NUP98-205ENST00000397007 IER3IP1Q9Y5U9 82 aa9.27□□□□□ -0.93
NUP98-205ENST00000397007 FKBP7Q9Y680 259 aa9.27□□□□□ -0.93
NUP98-205ENST00000397007 APCP25054 2843 aa9.27□□□□□ -0.93
NUP98-205ENST00000397007 A0A1B0GWJ7 208 aa9.26□□□□□ -0.93
NUP98-205ENST00000397007 BLOC1S5-TXNDC5H3BN57 136 aa9.26□□□□□ -0.93
NUP98-205ENST00000397007 DVL2O14641 736 aa9.26□□□□□ -0.93
NUP98-205ENST00000397007 SAGP10523 405 aaPredicted RBP9.26□□□□□ -0.93
NUP98-205ENST00000397007 PER3P56645 1201 aa9.26□□□□□ -0.93
NUP98-205ENST00000397007 KHDRBS1Q07666 443 aaKnown RBP eCLIP9.26□□□□□ -0.93
NUP98-205ENST00000397007 TIMM23BQ5SRD1 257 aa9.26□□□□□ -0.93
NUP98-205ENST00000397007 ZNF691Q5VV52 312 aa9.26□□□□□ -0.93
NUP98-205ENST00000397007 NIPAL3Q6P499 406 aa9.26□□□□□ -0.93
NUP98-205ENST00000397007 ANKRD16Q6P6B7 361 aa9.26□□□□□ -0.93
NUP98-205ENST00000397007 MYPOPQ86VE0 399 aaPredicted RBP9.26□□□□□ -0.93
NUP98-205ENST00000397007 TIGD4Q8IY51 512 aa9.26□□□□□ -0.93
NUP98-205ENST00000397007 ZNF566Q969W8 418 aa9.26□□□□□ -0.93
NUP98-205ENST00000397007 FAM118AQ9NWS6 357 aa9.26□□□□□ -0.93
NUP98-205ENST00000397007 B9D1Q9UPM9 204 aa9.26□□□□□ -0.93
NUP98-205ENST00000397007 A0A1W2PRG6 482 aa9.26□□□□□ -0.93
NUP98-205ENST00000397007 PRKYO43930 277 aa9.26□□□□□ -0.93
NUP98-205ENST00000397007 WBP4O75554 376 aaKnown RBP9.26□□□□□ -0.93
NUP98-205ENST00000397007 IGHG1P01857 330 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms