RNA–Protein interactions for RNA: ENST00000396858.5

GAPDH-203, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5 BASIC

Gene GAPDH, Length 1,292 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-203ENST00000396858 SHFQ7M4L6 423 aa12.48□□□□□ -0.41
GAPDH-203ENST00000396858 OR6V1Q8N148 313 aa12.48□□□□□ -0.41
GAPDH-203ENST00000396858 ST6GALNAC3Q8NDV1 305 aa12.48□□□□□ -0.41
GAPDH-203ENST00000396858 MBD3L2Q8NHZ7 208 aaPredicted RBP12.48□□□□□ -0.41
GAPDH-203ENST00000396858 NSMAFQ92636 917 aa12.48□□□□□ -0.41
GAPDH-203ENST00000396858 PTP4A1Q93096 173 aa12.48□□□□□ -0.41
GAPDH-203ENST00000396858 INTS12Q96CB8 462 aaKnown RBP12.48□□□□□ -0.41
GAPDH-203ENST00000396858 NMD3Q96D46 503 aaKnown RBP12.48□□□□□ -0.41
GAPDH-203ENST00000396858 ZMYND19Q96E35 227 aaPredicted RBP12.48□□□□□ -0.41
GAPDH-203ENST00000396858 GMPPAQ96IJ6 420 aaPredicted RBP12.48□□□□□ -0.41
GAPDH-203ENST00000396858 Q96MT0 163 aa12.48□□□□□ -0.41
GAPDH-203ENST00000396858 MRPL13Q9BYD1 178 aaKnown RBP12.48□□□□□ -0.41
GAPDH-203ENST00000396858 C12orf49Q9H741 205 aa12.48□□□□□ -0.41
GAPDH-203ENST00000396858 PAK1IP1Q9NWT1 392 aaPredicted RBP12.48□□□□□ -0.41
GAPDH-203ENST00000396858 FOXD3Q9UJU5 478 aaPredicted RBP12.48□□□□□ -0.41
GAPDH-203ENST00000396858 ZNF835Q9Y2P0 537 aa12.48□□□□□ -0.41
GAPDH-203ENST00000396858 SHANK1Q9Y566 2161 aa12.47□□□□□ -0.41
GAPDH-203ENST00000396858 IGSF10Q6WRI0 2623 aa12.47□□□□□ -0.41
GAPDH-203ENST00000396858 UPK3AO75631 287 aa12.47□□□□□ -0.41
GAPDH-203ENST00000396858 YES1P07947 543 aa12.47□□□□□ -0.41
GAPDH-203ENST00000396858 MRPL3P09001 348 aaKnown RBP12.47□□□□□ -0.41
GAPDH-203ENST00000396858 CRHBPP24387 322 aa12.47□□□□□ -0.41
GAPDH-203ENST00000396858 SF3B4Q15427 424 aaKnown RBP eCLIP12.47□□□□□ -0.418e-7■■■■□ 23.9
GAPDH-203ENST00000396858 GUSBP1Q15486 140 aa12.47□□□□□ -0.41
GAPDH-203ENST00000396858 ETFDHQ16134 617 aa12.47□□□□□ -0.41
GAPDH-203ENST00000396858 RBM48Q5RL73 367 aaKnown RBP12.47□□□□□ -0.41
GAPDH-203ENST00000396858 LCN1P1Q5VSP4 162 aa12.47□□□□□ -0.41
GAPDH-203ENST00000396858 OTPQ5XKR4 325 aa12.47□□□□□ -0.41
GAPDH-203ENST00000396858 GTF2IRD2BQ6EKJ0 949 aa12.47□□□□□ -0.41
GAPDH-203ENST00000396858 B3GNT6Q6ZMB0 384 aa12.47□□□□□ -0.41
GAPDH-203ENST00000396858 NCCRP1Q6ZVX7 275 aaPredicted RBP12.47□□□□□ -0.41
GAPDH-203ENST00000396858 MEPCEQ7L2J0 689 aaKnown RBP12.47□□□□□ -0.41
GAPDH-203ENST00000396858 GTF2IRD2Q86UP8 949 aa12.47□□□□□ -0.41
GAPDH-203ENST00000396858 DOLPP1Q86YN1 238 aa12.47□□□□□ -0.41
GAPDH-203ENST00000396858 C20orf196Q8IYI0 205 aa12.47□□□□□ -0.41
GAPDH-203ENST00000396858 CNEP1R1Q8N9A8 125 aa12.47□□□□□ -0.41
GAPDH-203ENST00000396858 NAXEQ8NCW5 288 aa12.47□□□□□ -0.41
GAPDH-203ENST00000396858 OR2T4Q8NH00 348 aa12.47□□□□□ -0.41
GAPDH-203ENST00000396858 RFKQ969G6 155 aa12.47□□□□□ -0.41
GAPDH-203ENST00000396858 TMEM54Q969K7 222 aa12.47□□□□□ -0.41
GAPDH-203ENST00000396858 APH1AQ96BI3 265 aa12.47□□□□□ -0.41
GAPDH-203ENST00000396858 RNFT2Q96EX2 444 aa12.47□□□□□ -0.41
GAPDH-203ENST00000396858 BBC3Q96PG8 261 aaPredicted RBP12.47□□□□□ -0.41
GAPDH-203ENST00000396858 NR1H4Q96RI1 486 aaPredicted RBP12.47□□□□□ -0.41
GAPDH-203ENST00000396858 TM9SF2Q99805 663 aa12.47□□□□□ -0.41
GAPDH-203ENST00000396858 ULBP2Q9BZM5 246 aa12.47□□□□□ -0.41
GAPDH-203ENST00000396858 RACGAP1Q9H0H5 632 aa12.47□□□□□ -0.41
GAPDH-203ENST00000396858 SLCO5A1Q9H2Y9 848 aa12.47□□□□□ -0.41
GAPDH-203ENST00000396858 SRA1Q9HD15 236 aaKnown RBP12.47□□□□□ -0.41
GAPDH-203ENST00000396858 GLTPQ9NZD2 209 aa12.47□□□□□ -0.41
GAPDH-203ENST00000396858 MYRFQ9Y2G1 1151 aa12.47□□□□□ -0.41
GAPDH-203ENST00000396858 ZFYVE26Q68DK2 2539 aa12.46□□□□□ -0.41
GAPDH-203ENST00000396858 A0A1W2PPL8 197 aa12.46□□□□□ -0.41
GAPDH-203ENST00000396858 SH3D21A4FU49 640 aa12.46□□□□□ -0.41
GAPDH-203ENST00000396858 TVP23AA6NH52 213 aa12.46□□□□□ -0.41
GAPDH-203ENST00000396858 SLC22A31A6NKX4 558 aa12.46□□□□□ -0.41
GAPDH-203ENST00000396858 CENPBD1B2RD01 187 aa12.46□□□□□ -0.41
GAPDH-203ENST00000396858 MRPL33O75394 65 aaKnown RBP12.46□□□□□ -0.41
GAPDH-203ENST00000396858 TOXO94900 526 aa12.46□□□□□ -0.41
GAPDH-203ENST00000396858 TNFAIP8O95379 198 aa12.46□□□□□ -0.41
GAPDH-203ENST00000396858 STSP08842 583 aa12.46□□□□□ -0.41
GAPDH-203ENST00000396858 RPSAP08865 295 aaKnown RBP12.46□□□□□ -0.41
GAPDH-203ENST00000396858 CCDC159P0C7I6 412 aa12.46□□□□□ -0.41
GAPDH-203ENST00000396858 NAA10P41227 235 aaPredicted RBP12.46□□□□□ -0.41
GAPDH-203ENST00000396858 CENPAP49450 140 aa12.46□□□□□ -0.41
GAPDH-203ENST00000396858 CDH15P55291 814 aa12.46□□□□□ -0.41
GAPDH-203ENST00000396858 PER3P56645 1201 aa12.46□□□□□ -0.41
GAPDH-203ENST00000396858 PIGFQ07326 219 aa12.46□□□□□ -0.41
GAPDH-203ENST00000396858 FOXF2Q12947 444 aa12.46□□□□□ -0.41
GAPDH-203ENST00000396858 KCTD21Q4G0X4 260 aa12.46□□□□□ -0.41
GAPDH-203ENST00000396858 LINC01590Q5TEZ4 76 aa12.46□□□□□ -0.41
GAPDH-203ENST00000396858 TSPO2Q5TGU0 170 aa12.46□□□□□ -0.41
GAPDH-203ENST00000396858 OR2A2Q6IF42 318 aa12.46□□□□□ -0.41
GAPDH-203ENST00000396858 VWA1Q6PCB0 445 aa12.46□□□□□ -0.41
GAPDH-203ENST00000396858 DNM1P34Q6PK57 102 aa12.46□□□□□ -0.41
GAPDH-203ENST00000396858 LINGO2Q7L985 606 aa12.46□□□□□ -0.41
GAPDH-203ENST00000396858 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.46□□□□□ -0.41
GAPDH-203ENST00000396858 GPR137CQ8N3F9 429 aa12.46□□□□□ -0.41
GAPDH-203ENST00000396858 ZNF540Q8NDQ6 660 aa12.46□□□□□ -0.41
GAPDH-203ENST00000396858 OR51G2Q8NGK0 314 aa12.46□□□□□ -0.41
GAPDH-203ENST00000396858 HTRA1Q92743 480 aa12.46□□□□□ -0.41
GAPDH-203ENST00000396858 MCHR2Q969V1 340 aa12.46□□□□□ -0.41
GAPDH-203ENST00000396858 GP6Q9HCN6 339 aa12.46□□□□□ -0.41
GAPDH-203ENST00000396858 GLRX2Q9NS18 164 aa12.46□□□□□ -0.41
GAPDH-203ENST00000396858 H2AFY2Q9P0M6 372 aaPredicted RBP12.46□□□□□ -0.41
GAPDH-203ENST00000396858 BLOC1S6Q9UL45 172 aa12.46□□□□□ -0.41
GAPDH-203ENST00000396858 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.46□□□□□ -0.41
GAPDH-203ENST00000396858 B9D1Q9UPM9 204 aa12.46□□□□□ -0.41
GAPDH-203ENST00000396858 EMC9Q9Y3B6 208 aa12.46□□□□□ -0.41
GAPDH-203ENST00000396858 FKBP7Q9Y680 259 aa12.46□□□□□ -0.41
GAPDH-203ENST00000396858 TRGV8A0A0C4DH27 118 aa12.45□□□□□ -0.42
GAPDH-203ENST00000396858 SNTNA6NMZ2 147 aa12.45□□□□□ -0.42
GAPDH-203ENST00000396858 SELENOFO60613 162 aa12.45□□□□□ -0.42
GAPDH-203ENST00000396858 KHDRBS3O75525 346 aaKnown RBP12.45□□□□□ -0.42
GAPDH-203ENST00000396858 SEC14L2O76054 403 aa12.45□□□□□ -0.42
GAPDH-203ENST00000396858 GLCEO94923 617 aa12.45□□□□□ -0.42
GAPDH-203ENST00000396858 LYNP07948 512 aa12.45□□□□□ -0.42
GAPDH-203ENST00000396858 ADRA2AP08913 450 aa12.45□□□□□ -0.42
GAPDH-203ENST00000396858 QDPRP09417 244 aa12.45□□□□□ -0.42
GAPDH-203ENST00000396858 TMIGD3P0DMS9 266 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms