RNA–Protein interactions for RNA: ENST00000396581.5

TRIM40-207, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM40, Length 2,086 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-207ENST00000396581 ANXA2P07355 339 aaKnown RBP12.09□□□□□ -0.47
TRIM40-207ENST00000396581 MST1P26927 711 aa12.09□□□□□ -0.47
TRIM40-207ENST00000396581 GRPRP30550 384 aa12.09□□□□□ -0.47
TRIM40-207ENST00000396581 ADH7P40394 386 aa12.09□□□□□ -0.47
TRIM40-207ENST00000396581 PSMD4P55036 377 aaKnown RBP12.09□□□□□ -0.47
TRIM40-207ENST00000396581 SRSF4Q08170 494 aaKnown RBP12.09□□□□□ -0.47
TRIM40-207ENST00000396581 NFATC4Q14934 902 aa12.09□□□□□ -0.47
TRIM40-207ENST00000396581 ETFDHQ16134 617 aa12.09□□□□□ -0.47
TRIM40-207ENST00000396581 TMEM31Q5JXX7 168 aa12.09□□□□□ -0.47
TRIM40-207ENST00000396581 NKAIN2Q5VXU1 208 aa12.09□□□□□ -0.47
TRIM40-207ENST00000396581 LRFN4Q6PJG9 635 aa12.09□□□□□ -0.47
TRIM40-207ENST00000396581 RNF44Q7L0R7 432 aa12.09□□□□□ -0.47
TRIM40-207ENST00000396581 ZNF511Q8NB15 262 aa12.09□□□□□ -0.47
TRIM40-207ENST00000396581 CLEC1AQ8NC01 280 aa12.09□□□□□ -0.47
TRIM40-207ENST00000396581 OR2G2Q8NGZ5 317 aa12.09□□□□□ -0.47
TRIM40-207ENST00000396581 EDAQ92838 391 aa12.09□□□□□ -0.47
TRIM40-207ENST00000396581 C3orf49Q96BT1 292 aa12.09□□□□□ -0.47
TRIM40-207ENST00000396581 MFFQ9GZY8 342 aa12.09□□□□□ -0.47
TRIM40-207ENST00000396581 BARX1Q9HBU1 254 aaPredicted RBP12.09□□□□□ -0.47
TRIM40-207ENST00000396581 IFT46Q9NQC8 304 aa12.09□□□□□ -0.47
TRIM40-207ENST00000396581 CYB5R1Q9UHQ9 305 aa12.09□□□□□ -0.47
TRIM40-207ENST00000396581 FBXL2Q9UKC9 423 aa12.09□□□□□ -0.47
TRIM40-207ENST00000396581 TMEM212A6NML5 194 aa12.08□□□□□ -0.48
TRIM40-207ENST00000396581 MPTX1A8MV57 137 aa12.08□□□□□ -0.48
TRIM40-207ENST00000396581 GNB5O14775 395 aa12.08□□□□□ -0.48
TRIM40-207ENST00000396581 TNFRSF10CO14798 259 aa12.08□□□□□ -0.48
TRIM40-207ENST00000396581 RPP14O95059 124 aaKnown RBP12.08□□□□□ -0.48
TRIM40-207ENST00000396581 APBB3O95704 486 aa12.08□□□□□ -0.48
TRIM40-207ENST00000396581 CD8AP01732 235 aa12.08□□□□□ -0.48
TRIM40-207ENST00000396581 RLN2P04090 185 aa12.08□□□□□ -0.48
TRIM40-207ENST00000396581 CD14P08571 375 aa12.08□□□□□ -0.48
TRIM40-207ENST00000396581 UBBP0CG47 229 aa12.08□□□□□ -0.48
TRIM40-207ENST00000396581 UBCP0CG48 685 aaKnown RBP12.08□□□□□ -0.48
TRIM40-207ENST00000396581 MGMTP16455 207 aa12.08□□□□□ -0.48
TRIM40-207ENST00000396581 SOX2P48431 317 aa12.08□□□□□ -0.48
TRIM40-207ENST00000396581 RAB38P57729 211 aa12.08□□□□□ -0.48
TRIM40-207ENST00000396581 RPS27AP62979 156 aaKnown RBP12.08□□□□□ -0.48
TRIM40-207ENST00000396581 UBA52P62987 128 aaKnown RBP12.08□□□□□ -0.48
TRIM40-207ENST00000396581 OC90Q02509 493 aaPredicted RBP12.08□□□□□ -0.48
TRIM40-207ENST00000396581 TFF2Q03403 129 aa12.08□□□□□ -0.48
TRIM40-207ENST00000396581 EGR3Q06889 387 aa12.08□□□□□ -0.48
TRIM40-207ENST00000396581 ZNHIT3Q15649 155 aaPredicted RBP12.08□□□□□ -0.48
TRIM40-207ENST00000396581 BIVMQ86UB2 503 aa12.08□□□□□ -0.48
TRIM40-207ENST00000396581 THRSPQ92748 146 aa12.08□□□□□ -0.48
TRIM40-207ENST00000396581 PMEPA1Q969W9 287 aa12.08□□□□□ -0.48
TRIM40-207ENST00000396581 ADAD1Q96M93 576 aaKnown RBP12.08□□□□□ -0.48
TRIM40-207ENST00000396581 SLC38A3Q99624 504 aa12.08□□□□□ -0.48
TRIM40-207ENST00000396581 GPR174Q9BXC1 333 aa12.08□□□□□ -0.48
TRIM40-207ENST00000396581 HS3ST3A1Q9Y663 406 aa12.08□□□□□ -0.48
TRIM40-207ENST00000396581 EML5Q05BV3 1969 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 ABCD4O14678 606 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 PRAMEF2O60811 474 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 CDC123O75794 336 aaPredicted RBP12.07□□□□□ -0.48
TRIM40-207ENST00000396581 RLN1P04808 185 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 FOSL2P15408 326 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 SDHAP31040 664 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 YPEL5P62699 121 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 EIF2B5Q13144 721 aaKnown RBP12.07□□□□□ -0.48
TRIM40-207ENST00000396581 GXYLT1Q4G148 440 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 LY6G6FQ5SQ64 297 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 FAM166AQ6J272 317 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 ATRAIDQ6UW56 229 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 NPSR1Q6W5P4 371 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 Q7L0L9 218 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 PXT1Q8NFP0 134 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 OR51S1Q8NGJ8 323 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 GPR148Q8TDV2 347 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 GPX8Q8TED1 209 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 RERGQ96A58 199 aaPredicted RBP12.07□□□□□ -0.48
TRIM40-207ENST00000396581 LMAN1LQ9HAT1 526 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 RASL12Q9NYN1 266 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 KNL1Q8NG31 2342 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 A0A0D9SG52 128 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 A0A1B0GW55 424 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 FAM171A2A8MVW0 826 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 SULT1C2O00338 296 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 PMS2P2O95744 297 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 MAS1P04201 325 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 IGHV4-34P06331 123 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 DUX4L2P0CJ85 424 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 DUX4L3P0CJ86 424 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 DUX4L4P0CJ87 422 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 DUX4L5P0CJ88 424 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 DUX4L6P0CJ89 424 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 DUX4L7P0CJ90 424 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 ALOX5APP20292 161 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 AGTR1P30556 359 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 AKT2P31751 481 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 CCR5P51681 352 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 EFNB2P52799 333 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 MELKQ14680 651 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 PRRT3Q5FWE3 981 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 FDX2Q6P4F2 183 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 ENPP7Q6UWV6 458 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 MOB3CQ70IA8 216 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 JAZF1Q86VZ6 243 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 LSM14AQ8ND56 463 aaKnown RBP12.07□□□□□ -0.48
TRIM40-207ENST00000396581 BAHD1Q8TBE0 780 aaPredicted RBP12.07□□□□□ -0.48
TRIM40-207ENST00000396581 TNFAIP8L1Q8WVP5 186 aa12.07□□□□□ -0.48
TRIM40-207ENST00000396581 OR1E3Q8WZA6 343 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms