RNA–Protein interactions for RNA: ENST00000395793.7

CXCL12-204, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-204ENST00000395793 DEF8Q6ZN54 512 aa15.5■□□□□ 0.07
CXCL12-204ENST00000395793 PAQR4Q8N4S7 273 aaPredicted RBP15.5■□□□□ 0.07
CXCL12-204ENST00000395793 OR8J3Q8NGG0 315 aa15.5■□□□□ 0.07
CXCL12-204ENST00000395793 UBASH3BQ8TF42 649 aa15.5■□□□□ 0.07
CXCL12-204ENST00000395793 ZNF583Q96ND8 569 aa15.5■□□□□ 0.07
CXCL12-204ENST00000395793 ZNF347Q96SE7 839 aa15.5■□□□□ 0.07
CXCL12-204ENST00000395793 DENND2DQ9H6A0 471 aaPredicted RBP15.5■□□□□ 0.07
CXCL12-204ENST00000395793 SAR1AQ9NR31 198 aa15.5■□□□□ 0.07
CXCL12-204ENST00000395793 C20orf141Q9NUB4 165 aa15.5■□□□□ 0.07
CXCL12-204ENST00000395793 FGFR1OP2Q9NVK5 253 aa15.5■□□□□ 0.07
CXCL12-204ENST00000395793 SH3GLB1Q9Y371 365 aa15.5■□□□□ 0.07
CXCL12-204ENST00000395793 M0R233 179 aa15.49■□□□□ 0.07
CXCL12-204ENST00000395793 MRASO14807 208 aa15.49■□□□□ 0.07
CXCL12-204ENST00000395793 SYNGR3O43761 229 aa15.49■□□□□ 0.07
CXCL12-204ENST00000395793 OR7A10O76100 309 aa15.49■□□□□ 0.07
CXCL12-204ENST00000395793 MT-ND1P03886 318 aa15.49■□□□□ 0.07
CXCL12-204ENST00000395793 SERPINA5P05154 406 aa15.49■□□□□ 0.07
CXCL12-204ENST00000395793 F13BP05160 661 aa15.49■□□□□ 0.07
CXCL12-204ENST00000395793 QDPRP09417 244 aa15.49■□□□□ 0.07
CXCL12-204ENST00000395793 FUT4P22083 530 aa15.49■□□□□ 0.07
CXCL12-204ENST00000395793 OR1E2P47887 323 aa15.49■□□□□ 0.07
CXCL12-204ENST00000395793 EVX1P49640 407 aa15.49■□□□□ 0.07
CXCL12-204ENST00000395793 MYBPC1Q00872 1141 aa15.49■□□□□ 0.07
CXCL12-204ENST00000395793 SRSF2Q01130 221 aaKnown RBP15.49■□□□□ 0.07
CXCL12-204ENST00000395793 PIN1Q13526 163 aaPredicted RBP15.49■□□□□ 0.07
CXCL12-204ENST00000395793 HIST3H3Q16695 136 aa15.49■□□□□ 0.07
CXCL12-204ENST00000395793 ELFN2Q5R3F8 820 aa15.49■□□□□ 0.07
CXCL12-204ENST00000395793 ZNF540Q8NDQ6 660 aa15.49■□□□□ 0.07
CXCL12-204ENST00000395793 NOXO1Q8NFA2 376 aa15.49■□□□□ 0.07
CXCL12-204ENST00000395793 OR4K5Q8NGD3 323 aa15.49■□□□□ 0.07
CXCL12-204ENST00000395793 RASSF5Q8WWW0 418 aa15.49■□□□□ 0.07
CXCL12-204ENST00000395793 ASB10Q8WXI3 467 aa15.49■□□□□ 0.07
CXCL12-204ENST00000395793 SEPHS2Q99611 448 aa15.49■□□□□ 0.07
CXCL12-204ENST00000395793 MRPL13Q9BYD1 178 aaKnown RBP15.49■□□□□ 0.07
CXCL12-204ENST00000395793 ARGLU1Q9NWB6 273 aaPredicted RBP15.49■□□□□ 0.07
CXCL12-204ENST00000395793 GMPR2Q9P2T1 348 aaKnown RBP15.49■□□□□ 0.07
CXCL12-204ENST00000395793 BLOC1S5-TXNDC5H3BN57 136 aa15.48■□□□□ 0.07
CXCL12-204ENST00000395793 PIP5K1CO60331 668 aa15.48■□□□□ 0.07
CXCL12-204ENST00000395793 BCL10O95999 233 aa15.48■□□□□ 0.07
CXCL12-204ENST00000395793 TGFAP01135 160 aa15.48■□□□□ 0.07
CXCL12-204ENST00000395793 HPXP02790 462 aa15.48■□□□□ 0.07
CXCL12-204ENST00000395793 HIST1H2ABP04908 130 aa15.48■□□□□ 0.07
CXCL12-204ENST00000395793 TSPAN19P0C672 248 aa15.48■□□□□ 0.07
CXCL12-204ENST00000395793 OR8G3PP0DMU2 310 aa15.48■□□□□ 0.07
CXCL12-204ENST00000395793 CCL2P13500 99 aa15.48■□□□□ 0.07
CXCL12-204ENST00000395793 FUT1P19526 365 aa15.48■□□□□ 0.07
CXCL12-204ENST00000395793 TCN1P20061 433 aaPredicted RBP15.48■□□□□ 0.07
CXCL12-204ENST00000395793 AQP2P41181 271 aa15.48■□□□□ 0.07
CXCL12-204ENST00000395793 KRTAP24-1Q3LI83 254 aa15.48■□□□□ 0.07
CXCL12-204ENST00000395793 COQ5Q5HYK3 327 aa15.48■□□□□ 0.07
CXCL12-204ENST00000395793 HIST3H2AQ7L7L0 130 aa15.48■□□□□ 0.07
CXCL12-204ENST00000395793 MOSPD2Q8NHP6 518 aa15.48■□□□□ 0.07
CXCL12-204ENST00000395793 C10orf82Q8WW14 230 aa15.48■□□□□ 0.07
CXCL12-204ENST00000395793 HIST1H2ACQ93077 130 aa15.48■□□□□ 0.07
CXCL12-204ENST00000395793 MCHR2Q969V1 340 aa15.48■□□□□ 0.07
CXCL12-204ENST00000395793 SNX18Q96RF0 628 aa15.48■□□□□ 0.07
CXCL12-204ENST00000395793 ECSITQ9BQ95 431 aa15.48■□□□□ 0.07
CXCL12-204ENST00000395793 REPIN1Q9BWE0 567 aaKnown RBP15.48■□□□□ 0.07
CXCL12-204ENST00000395793 REV1Q9UBZ9 1251 aa15.48■□□□□ 0.07
CXCL12-204ENST00000395793 RIMS3Q9UJD0 308 aa15.48■□□□□ 0.07
CXCL12-204ENST00000395793 SPEF1Q9Y4P9 236 aa15.48■□□□□ 0.07
CXCL12-204ENST00000395793 TRMUO75648 421 aaKnown RBP15.47■□□□□ 0.07
CXCL12-204ENST00000395793 NCR1O76036 304 aa15.47■□□□□ 0.07
CXCL12-204ENST00000395793 OR5F1O95221 314 aa15.47■□□□□ 0.07
CXCL12-204ENST00000395793 IGHG1P01857 330 aa15.47■□□□□ 0.07
CXCL12-204ENST00000395793 ERCC1P07992 297 aaPredicted RBP15.47■□□□□ 0.07
CXCL12-204ENST00000395793 SRD5A1P18405 259 aa15.47■□□□□ 0.07
CXCL12-204ENST00000395793 RBM34P42696 430 aaKnown RBP15.47■□□□□ 0.07
CXCL12-204ENST00000395793 CHN2P52757 468 aa15.47■□□□□ 0.07
CXCL12-204ENST00000395793 ARFIP2P53365 341 aa15.47■□□□□ 0.07
CXCL12-204ENST00000395793 CLRN1P58418 232 aa15.47■□□□□ 0.07
CXCL12-204ENST00000395793 TAS2R41P59536 307 aa15.47■□□□□ 0.07
CXCL12-204ENST00000395793 ERVS71-1P61550 626 aa15.47■□□□□ 0.07
CXCL12-204ENST00000395793 GALK2Q01415 458 aa15.47■□□□□ 0.07
CXCL12-204ENST00000395793 GKAP1Q5VSY0 366 aaPredicted RBP15.47■□□□□ 0.07
CXCL12-204ENST00000395793 SYT14Q8NB59 555 aa15.47■□□□□ 0.07
CXCL12-204ENST00000395793 TMEM239Q8WW34 195 aa15.47■□□□□ 0.07
CXCL12-204ENST00000395793 TMEM158Q8WZ71 300 aa15.47■□□□□ 0.07
CXCL12-204ENST00000395793 NMD3Q96D46 503 aaKnown RBP15.47■□□□□ 0.07
CXCL12-204ENST00000395793 SGTBQ96EQ0 304 aa15.47■□□□□ 0.07
CXCL12-204ENST00000395793 SH3GL1Q99961 368 aa15.47■□□□□ 0.07
CXCL12-204ENST00000395793 SLC7A8Q9UHI5 535 aa15.47■□□□□ 0.07
CXCL12-204ENST00000395793 FBXL3Q9UKT7 428 aa15.47■□□□□ 0.07
CXCL12-204ENST00000395793 BAG5Q9UL15 447 aa15.47■□□□□ 0.07
CXCL12-204ENST00000395793 IGKV1D-43A0A0B4J1Z2 117 aa15.46■□□□□ 0.07
CXCL12-204ENST00000395793 LOC100653049A0A140TA62 436 aa15.46■□□□□ 0.07
CXCL12-204ENST00000395793 BBIP1A8MTZ0 92 aa15.46■□□□□ 0.07
CXCL12-204ENST00000395793 FAM220BPB1ANY3 271 aa15.46■□□□□ 0.07
CXCL12-204ENST00000395793 KRT34O76011 436 aa15.46■□□□□ 0.07
CXCL12-204ENST00000395793 CLPTM1O96005 669 aa15.46■□□□□ 0.07
CXCL12-204ENST00000395793 FAM157BP0CG42 384 aa15.46■□□□□ 0.07
CXCL12-204ENST00000395793 TROVE2P10155 538 aaKnown RBP eCLIP15.46■□□□□ 0.07
CXCL12-204ENST00000395793 APEX1P27695 318 aaKnown RBP15.46■□□□□ 0.07
CXCL12-204ENST00000395793 ZNF133P52736 654 aaPredicted RBP15.46■□□□□ 0.07
CXCL12-204ENST00000395793 RPS23P62266 143 aaKnown RBP15.46■□□□□ 0.07
CXCL12-204ENST00000395793 CR1LQ2VPA4 569 aa15.46■□□□□ 0.07
CXCL12-204ENST00000395793 MMEL1Q495T6 779 aa15.46■□□□□ 0.07
CXCL12-204ENST00000395793 LRRC23Q53EV4 343 aaPredicted RBP15.46■□□□□ 0.07
CXCL12-204ENST00000395793 CYBRD1Q53TN4 286 aa15.46■□□□□ 0.07
CXCL12-204ENST00000395793 ARMC4Q5T2S8 1044 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms