RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 ATG5Q9H1Y0 275 aa14.37□□□□□ -0.11
SMARCD1-202ENST00000394963 PLEKHB1Q9UF11 243 aaPredicted RBP14.37□□□□□ -0.11
SMARCD1-202ENST00000394963 PILRBQ9UKJ0 227 aa14.37□□□□□ -0.11
SMARCD1-202ENST00000394963 KLHDC2Q9Y2U9 406 aa14.37□□□□□ -0.11
SMARCD1-202ENST00000394963 PCNX3Q9H6A9 2034 aa14.36□□□□□ -0.11
SMARCD1-202ENST00000394963 INMT-MINDY4F8WBC2 141 aa14.36□□□□□ -0.11
SMARCD1-202ENST00000394963 C19orf57Q0VDD7 668 aa14.36□□□□□ -0.11
SMARCD1-202ENST00000394963 RABEPKQ7Z6M1 372 aa14.36□□□□□ -0.11
SMARCD1-202ENST00000394963 DRAXINQ8NBI3 349 aaPredicted RBP14.36□□□□□ -0.11
SMARCD1-202ENST00000394963 SFXN2Q96NB2 322 aa14.36□□□□□ -0.11
SMARCD1-202ENST00000394963 STRADBQ9C0K7 418 aa14.36□□□□□ -0.11
SMARCD1-202ENST00000394963 ZNF768Q9H5H4 540 aaKnown RBP14.36□□□□□ -0.11
SMARCD1-202ENST00000394963 SP140LQ9H930 580 aa14.36□□□□□ -0.11
SMARCD1-202ENST00000394963 KLHL9Q9P2J3 617 aa14.36□□□□□ -0.11
SMARCD1-202ENST00000394963 LOXL2Q9Y4K0 774 aa14.36□□□□□ -0.11
SMARCD1-202ENST00000394963 P2RY10O00398 339 aa14.36□□□□□ -0.11
SMARCD1-202ENST00000394963 PTP4A3O75365 173 aa14.36□□□□□ -0.11
SMARCD1-202ENST00000394963 NTRK2Q16620 822 aa14.36□□□□□ -0.11
SMARCD1-202ENST00000394963 RSPO4Q2I0M5 234 aaPredicted RBP14.36□□□□□ -0.11
SMARCD1-202ENST00000394963 SCGB2B2Q4G0G5 96 aa14.36□□□□□ -0.11
SMARCD1-202ENST00000394963 MESTQ5EB52 335 aa14.36□□□□□ -0.11
SMARCD1-202ENST00000394963 TMED4Q7Z7H5 227 aa14.36□□□□□ -0.11
SMARCD1-202ENST00000394963 ADGRG3Q86Y34 549 aa14.36□□□□□ -0.11
SMARCD1-202ENST00000394963 LSMEM1Q8N8F7 131 aa14.36□□□□□ -0.11
SMARCD1-202ENST00000394963 OR13C3Q8NGS6 347 aa14.36□□□□□ -0.11
SMARCD1-202ENST00000394963 PLA2G3Q9NZ20 509 aa14.36□□□□□ -0.11
SMARCD1-202ENST00000394963 NTMQ9P121 344 aa14.36□□□□□ -0.11
SMARCD1-202ENST00000394963 IGKV1D-42A0A075B6H8 117 aa14.36□□□□□ -0.11
SMARCD1-202ENST00000394963 BLACEA4D250 179 aa14.36□□□□□ -0.11
SMARCD1-202ENST00000394963 FAM172BPA6NC97 362 aa14.36□□□□□ -0.11
SMARCD1-202ENST00000394963 CCR6P51684 374 aa14.36□□□□□ -0.11
SMARCD1-202ENST00000394963 EGR4Q05215 589 aa14.36□□□□□ -0.11
SMARCD1-202ENST00000394963 VASH2Q86V25 355 aa14.36□□□□□ -0.11
SMARCD1-202ENST00000394963 AMELYQ99218 206 aa14.36□□□□□ -0.11
SMARCD1-202ENST00000394963 STMN3Q9NZ72 180 aa14.36□□□□□ -0.11
SMARCD1-202ENST00000394963 AKAP6Q13023 2319 aa14.35□□□□□ -0.11
SMARCD1-202ENST00000394963 TRAV18A0A075B6X5 111 aa14.35□□□□□ -0.11
SMARCD1-202ENST00000394963 TRABD2BA6NFA1 517 aa14.35□□□□□ -0.11
SMARCD1-202ENST00000394963 FAM166BA8MTA8 275 aa14.35□□□□□ -0.11
SMARCD1-202ENST00000394963 D6RAR5 112 aa14.35□□□□□ -0.11
SMARCD1-202ENST00000394963 CSF3P09919 207 aa14.35□□□□□ -0.11
SMARCD1-202ENST00000394963 GIFP27352 417 aa14.35□□□□□ -0.11
SMARCD1-202ENST00000394963 RPL27P61353 136 aaKnown RBP14.35□□□□□ -0.11
SMARCD1-202ENST00000394963 TEKQ02763 1124 aa14.35□□□□□ -0.11
SMARCD1-202ENST00000394963 SNTB2Q13425 540 aaKnown RBP14.35□□□□□ -0.11
SMARCD1-202ENST00000394963 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.35□□□□□ -0.11
SMARCD1-202ENST00000394963 WDR74Q6RFH5 385 aaPredicted RBP14.35□□□□□ -0.11
SMARCD1-202ENST00000394963 GALNTL5Q7Z4T8 443 aa14.35□□□□□ -0.11
SMARCD1-202ENST00000394963 LIN7BQ9HAP6 207 aa14.35□□□□□ -0.11
SMARCD1-202ENST00000394963 ALG1L2C9J202 215 aa14.35□□□□□ -0.11
SMARCD1-202ENST00000394963 SRMP19623 302 aa14.35□□□□□ -0.11
SMARCD1-202ENST00000394963 GDF1P27539 372 aa14.35□□□□□ -0.11
SMARCD1-202ENST00000394963 SLC7A6Q92536 515 aa14.35□□□□□ -0.11
SMARCD1-202ENST00000394963 ADIPOR1Q96A54 375 aa14.35□□□□□ -0.11
SMARCD1-202ENST00000394963 SLC25A44Q96H78 314 aaPredicted RBP14.35□□□□□ -0.11
SMARCD1-202ENST00000394963 RNF170Q96K19 258 aa14.35□□□□□ -0.11
SMARCD1-202ENST00000394963 SIGLEC11Q96RL6 698 aa14.35□□□□□ -0.11
SMARCD1-202ENST00000394963 OR10A4Q9H209 315 aa14.35□□□□□ -0.11
SMARCD1-202ENST00000394963 FBXL3Q9UKT7 428 aa14.35□□□□□ -0.11
SMARCD1-202ENST00000394963 ZNF281Q9Y2X9 895 aa14.35□□□□□ -0.11
SMARCD1-202ENST00000394963 MEIOCA2RUB1 952 aa14.35□□□□□ -0.11
SMARCD1-202ENST00000394963 PITPNBP48739 271 aa14.35□□□□□ -0.11
SMARCD1-202ENST00000394963 GMFBP60983 142 aa14.35□□□□□ -0.11
SMARCD1-202ENST00000394963 CDK5R1Q15078 307 aa14.35□□□□□ -0.11
SMARCD1-202ENST00000394963 XKRXQ6PP77 449 aa14.35□□□□□ -0.11
SMARCD1-202ENST00000394963 SYNPRQ8TBG9 265 aa14.35□□□□□ -0.11
SMARCD1-202ENST00000394963 S100A16Q96FQ6 103 aaKnown RBP14.35□□□□□ -0.11
SMARCD1-202ENST00000394963 S100A13Q99584 98 aa14.35□□□□□ -0.11
SMARCD1-202ENST00000394963 NRIP3Q9NQ35 241 aa14.35□□□□□ -0.11
SMARCD1-202ENST00000394963 TLX3O43711 291 aaPredicted RBP14.34□□□□□ -0.11
SMARCD1-202ENST00000394963 HCKP08631 526 aa14.34□□□□□ -0.11
SMARCD1-202ENST00000394963 MYBPHQ13203 477 aa14.34□□□□□ -0.11
SMARCD1-202ENST00000394963 SHBQ15464 509 aa14.34□□□□□ -0.11
SMARCD1-202ENST00000394963 SLC25A25Q6KCM7 469 aa14.34□□□□□ -0.11
SMARCD1-202ENST00000394963 OR1J4Q8NGS1 313 aa14.34□□□□□ -0.11
SMARCD1-202ENST00000394963 RASL10BQ96S79 203 aa14.34□□□□□ -0.11
SMARCD1-202ENST00000394963 MIXL1Q9H2W2 232 aa14.34□□□□□ -0.11
SMARCD1-202ENST00000394963 NEK6Q9HC98 313 aa14.34□□□□□ -0.11
SMARCD1-202ENST00000394963 TMEM14AQ9Y6G1 99 aa14.34□□□□□ -0.11
SMARCD1-202ENST00000394963 ATF1P18846 271 aa14.34□□□□□ -0.11
SMARCD1-202ENST00000394963 SNU13P55769 128 aaKnown RBP14.34□□□□□ -0.11
SMARCD1-202ENST00000394963 ZXDAP98168 799 aa14.34□□□□□ -0.11
SMARCD1-202ENST00000394963 ZNF362Q5T0B9 420 aaPredicted RBP14.34□□□□□ -0.11
SMARCD1-202ENST00000394963 RPL22L1Q6P5R6 122 aaKnown RBP14.34□□□□□ -0.11
SMARCD1-202ENST00000394963 ABHD12BQ7Z5M8 362 aaPredicted RBP14.34□□□□□ -0.11
SMARCD1-202ENST00000394963 CACNG6Q9BXT2 260 aa14.34□□□□□ -0.11
SMARCD1-202ENST00000394963 MED28Q9H204 178 aa14.34□□□□□ -0.11
SMARCD1-202ENST00000394963 FAM86C1Q9NVL1 165 aa14.34□□□□□ -0.11
SMARCD1-202ENST00000394963 ASH2LQ9UBL3 628 aa14.34□□□□□ -0.11
SMARCD1-202ENST00000394963 B9D1Q9UPM9 204 aa14.34□□□□□ -0.11
SMARCD1-202ENST00000394963 CLDN16Q9Y5I7 305 aa14.34□□□□□ -0.11
SMARCD1-202ENST00000394963 V9GY05 133 aa14.34□□□□□ -0.11
SMARCD1-202ENST00000394963 CACNA1DQ01668 2161 aa14.34□□□□□ -0.11
SMARCD1-202ENST00000394963 KIAA1549LQ6ZVL6 1849 aa14.34□□□□□ -0.11
SMARCD1-202ENST00000394963 RPS4Y1P22090 263 aaKnown RBP14.34□□□□□ -0.11
SMARCD1-202ENST00000394963 GABRA4P48169 554 aa14.34□□□□□ -0.11
SMARCD1-202ENST00000394963 DGCR2P98153 550 aa14.34□□□□□ -0.11
SMARCD1-202ENST00000394963 HSF1Q00613 529 aa14.34□□□□□ -0.11
SMARCD1-202ENST00000394963 DNM1P34Q6PK57 102 aa14.34□□□□□ -0.11
SMARCD1-202ENST00000394963 GPR148Q8TDV2 347 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms