RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 ABHD6Q9BV23 337 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 SUCNR1Q9BXA5 334 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 BARHL1Q9BZE3 327 aa9.56□□□□□ -0.88
COL4A6-203ENST00000394872 COA3Q9Y2R0 106 aaPredicted RBP9.56□□□□□ -0.88
COL4A6-203ENST00000394872 NXPH3O95157 252 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 AGFG1P52594 562 aaKnown RBP9.55□□□□□ -0.88
COL4A6-203ENST00000394872 RPS23P62266 143 aaKnown RBP9.55□□□□□ -0.88
COL4A6-203ENST00000394872 KCNIP4Q6PIL6 250 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 RSPO2Q6UXX9 243 aaPredicted RBP9.55□□□□□ -0.88
COL4A6-203ENST00000394872 LILRA2Q8N149 483 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 EDEM2Q9BV94 578 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 C2CD4DB7Z1M9 353 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 GSK3AP49840 483 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 MC2RQ01718 297 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 PLA2G7Q13093 441 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 CD300LGQ6UXG3 332 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 IP6K3Q96PC2 410 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 DCLRE1CQ96SD1 692 aaKnown RBP9.55□□□□□ -0.88
COL4A6-203ENST00000394872 CNTNAP3Q9BZ76 1288 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 NT5DC2Q9H857 520 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 CEPT1Q9Y6K0 416 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 EFSO43281 561 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 IL2RAP01589 272 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 PMP2P02689 132 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 CR2P20023 1033 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 PLK5Q496M5 336 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 VWA2Q5GFL6 755 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 KDM8Q8N371 416 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 MENTQ9BUN1 341 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 AMBRA1Q9C0C7 1298 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 GPATCH2Q9NW75 528 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 PROCRQ9UNN8 238 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 CLDN24A6NM45 220 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 ARHGAP33O14559 1287 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 HS3ST1O14792 307 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 FBXO24O75426 580 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 APEHP13798 732 aaKnown RBP9.55□□□□□ -0.88
COL4A6-203ENST00000394872 ANXA7P20073 488 aaKnown RBP9.55□□□□□ -0.88
COL4A6-203ENST00000394872 ARL16Q0P5N6 197 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 FOXC1Q12948 553 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 PRTGQ2VWP7 1150 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 Q6ZSR9 355 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 ZNF511Q8NB15 262 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 C8orf44Q96CB5 159 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 MS4A6EQ96DS6 147 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 RTL8AQ9BWD3 113 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 ZNF436Q9C0F3 470 aaPredicted RBP9.55□□□□□ -0.88
COL4A6-203ENST00000394872 C20orf27Q9GZN8 174 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 KIF13AQ9H1H9 1805 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 IDSB3KWA1 339 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 M0R1B8 84 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 SGCEO43556 437 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 SHC1P29353 583 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 ETV6P41212 452 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 DUSP5Q16690 384 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 NAXDQ8IW45 347 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 BCORP1Q8N888 145 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 INTS12Q96CB8 462 aaKnown RBP9.55□□□□□ -0.88
COL4A6-203ENST00000394872 ZNF486Q96H40 463 aaPredicted RBP9.55□□□□□ -0.88
COL4A6-203ENST00000394872 MRGPRX1Q96LB2 322 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 CCDC74BQ96LY2 380 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 OR2M2Q96R28 347 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 ITGBL1O95965 494 aaPredicted RBP9.55□□□□□ -0.88
COL4A6-203ENST00000394872 SSTR2P30874 369 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 TEKQ02763 1124 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 BATFQ16520 125 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 TRMT12Q53H54 448 aaKnown RBP9.55□□□□□ -0.88
COL4A6-203ENST00000394872 SLC35D3Q5M8T2 416 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 BATF2Q8N1L9 274 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 SEMA6DQ8NFY4 1073 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 CSF3RQ99062 836 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 TMEM38AQ9H6F2 299 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 ANKRD36CQ5JPF3 1778 aa9.55□□□□□ -0.88
COL4A6-203ENST00000394872 SLC5A10A0PJK1 596 aa9.54□□□□□ -0.88
COL4A6-203ENST00000394872 GLCEO94923 617 aa9.54□□□□□ -0.88
COL4A6-203ENST00000394872 SNRNP70P08621 437 aaKnown RBP9.54□□□□□ -0.88
COL4A6-203ENST00000394872 RPA2P15927 270 aa9.54□□□□□ -0.88
COL4A6-203ENST00000394872 NAGAP17050 411 aa9.54□□□□□ -0.88
COL4A6-203ENST00000394872 FPR3P25089 353 aa9.54□□□□□ -0.88
COL4A6-203ENST00000394872 FKBP2P26885 142 aaKnown RBP9.54□□□□□ -0.88
COL4A6-203ENST00000394872 RPL27P61353 136 aaKnown RBP9.54□□□□□ -0.88
COL4A6-203ENST00000394872 MRPS34P82930 218 aaKnown RBP9.54□□□□□ -0.88
COL4A6-203ENST00000394872 ILKQ13418 452 aa9.54□□□□□ -0.88
COL4A6-203ENST00000394872 HNF4GQ14541 408 aa9.54□□□□□ -0.88
COL4A6-203ENST00000394872 ZNF74Q16587 644 aa9.54□□□□□ -0.88
COL4A6-203ENST00000394872 OVCH1Q7RTY7 1134 aa9.54□□□□□ -0.88
COL4A6-203ENST00000394872 OR52I1Q8NGK6 324 aa9.54□□□□□ -0.88
COL4A6-203ENST00000394872 ZNF583Q96ND8 569 aa9.54□□□□□ -0.88
COL4A6-203ENST00000394872 SAMD10Q9BYL1 202 aa9.54□□□□□ -0.88
COL4A6-203ENST00000394872 ZDHHC5Q9C0B5 715 aa9.54□□□□□ -0.88
COL4A6-203ENST00000394872 SSUH2Q9Y2M2 353 aa9.54□□□□□ -0.88
COL4A6-203ENST00000394872 HRH3Q9Y5N1 445 aa9.54□□□□□ -0.88
COL4A6-203ENST00000394872 MYO9BQ13459 2157 aa9.54□□□□□ -0.88
COL4A6-203ENST00000394872 PHF1O43189 567 aaPredicted RBP9.54□□□□□ -0.88
COL4A6-203ENST00000394872 MAP2K6P52564 334 aa9.54□□□□□ -0.88
COL4A6-203ENST00000394872 SLC35G3Q8N808 338 aa9.54□□□□□ -0.88
COL4A6-203ENST00000394872 OR56B4Q8NH76 319 aa9.54□□□□□ -0.88
COL4A6-203ENST00000394872 SAT2Q96F10 170 aaPredicted RBP9.54□□□□□ -0.88
COL4A6-203ENST00000394872 TXN2Q99757 166 aa9.54□□□□□ -0.88
COL4A6-203ENST00000394872 SEMA4CQ9C0C4 833 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms