RNA–Protein interactions for RNA: ENST00000394536.4

PCDH1-203, Transcript of protocadherin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH1, Length 3,827 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-203ENST00000394536 OR2G2Q8NGZ5 317 aa14.71□□□□□ -0.06
PCDH1-203ENST00000394536 PGLYRP3Q96LB9 341 aa14.71□□□□□ -0.06
PCDH1-203ENST00000394536 MOGAT1Q96PD6 335 aa14.71□□□□□ -0.06
PCDH1-203ENST00000394536 TRPM7Q96QT4 1865 aa14.71□□□□□ -0.06
PCDH1-203ENST00000394536 GIPP09681 153 aaPredicted RBP14.7□□□□□ -0.06
PCDH1-203ENST00000394536 SULT1A3P0DMM9 295 aa14.7□□□□□ -0.06
PCDH1-203ENST00000394536 SULT1A4P0DMN0 295 aa14.7□□□□□ -0.06
PCDH1-203ENST00000394536 PGCP20142 388 aa14.7□□□□□ -0.06
PCDH1-203ENST00000394536 RPL35P42766 123 aaKnown RBP14.7□□□□□ -0.06
PCDH1-203ENST00000394536 LIMK1P53667 647 aa14.7□□□□□ -0.06
PCDH1-203ENST00000394536 PSG6Q00889 435 aa14.7□□□□□ -0.06
PCDH1-203ENST00000394536 TAGLNQ01995 201 aaKnown RBP14.7□□□□□ -0.06
PCDH1-203ENST00000394536 TFF2Q03403 129 aa14.7□□□□□ -0.06
PCDH1-203ENST00000394536 CHAF1BQ13112 559 aa14.7□□□□□ -0.06
PCDH1-203ENST00000394536 AIMP2Q13155 320 aaKnown RBP14.7□□□□□ -0.06
PCDH1-203ENST00000394536 FAM53BQ14153 422 aa14.7□□□□□ -0.06
PCDH1-203ENST00000394536 UNQ6126/PRO20091Q6UXV3 157 aa14.7□□□□□ -0.06
PCDH1-203ENST00000394536 DGAT2L6Q6ZPD8 337 aa14.7□□□□□ -0.06
PCDH1-203ENST00000394536 ZNF615Q8N8J6 731 aa14.7□□□□□ -0.06
PCDH1-203ENST00000394536 NPRL2Q8WTW4 380 aa14.7□□□□□ -0.06
PCDH1-203ENST00000394536 WDR89Q96FK6 387 aaPredicted RBP14.7□□□□□ -0.06
PCDH1-203ENST00000394536 UBL7Q96S82 380 aaPredicted RBP14.7□□□□□ -0.06
PCDH1-203ENST00000394536 MRI1Q9BV20 369 aa14.7□□□□□ -0.06
PCDH1-203ENST00000394536 TAS2R5Q9NYW4 299 aa14.7□□□□□ -0.06
PCDH1-203ENST00000394536 DOCK9Q9BZ29 2069 aa14.7□□□□□ -0.06
PCDH1-203ENST00000394536 TMEM269A0A1B0GVZ9 245 aa14.7□□□□□ -0.06
PCDH1-203ENST00000394536 TCRBV16S1A1N1A0A5B0 115 aa14.7□□□□□ -0.06
PCDH1-203ENST00000394536 TMEM212A6NML5 194 aa14.7□□□□□ -0.06
PCDH1-203ENST00000394536 E9PQ18 207 aa14.7□□□□□ -0.06
PCDH1-203ENST00000394536 DLSTP36957 453 aa14.7□□□□□ -0.06
PCDH1-203ENST00000394536 C19orf57Q0VDD7 668 aa14.7□□□□□ -0.06
PCDH1-203ENST00000394536 FCRL6Q6DN72 434 aa14.7□□□□□ -0.06
PCDH1-203ENST00000394536 TOE1Q96GM8 510 aaKnown RBP14.7□□□□□ -0.06
PCDH1-203ENST00000394536 NUDT22Q9BRQ3 303 aa14.7□□□□□ -0.06
PCDH1-203ENST00000394536 MENTQ9BUN1 341 aa14.7□□□□□ -0.06
PCDH1-203ENST00000394536 POLMQ9NP87 494 aaPredicted RBP14.7□□□□□ -0.06
PCDH1-203ENST00000394536 CA10Q9NS85 328 aa14.7□□□□□ -0.06
PCDH1-203ENST00000394536 ELF5Q9UKW6 265 aaPredicted RBP14.7□□□□□ -0.06
PCDH1-203ENST00000394536 TPMTP51580 245 aa14.7□□□□□ -0.06
PCDH1-203ENST00000394536 LUMP51884 338 aaPredicted RBP14.7□□□□□ -0.06
PCDH1-203ENST00000394536 C2orf76Q3KRA6 126 aa14.7□□□□□ -0.06
PCDH1-203ENST00000394536 FAM109BQ6ICB4 259 aaPredicted RBP14.7□□□□□ -0.06
PCDH1-203ENST00000394536 HAGHLQ6PII5 290 aaPredicted RBP14.7□□□□□ -0.06
PCDH1-203ENST00000394536 DND1Q8IYX4 353 aaKnown RBP14.7□□□□□ -0.06
PCDH1-203ENST00000394536 OR6M1Q8NGM8 313 aa14.7□□□□□ -0.06
PCDH1-203ENST00000394536 OR2AJ1Q8NGZ0 328 aa14.7□□□□□ -0.06
PCDH1-203ENST00000394536 MIB2Q96AX9 1013 aa14.7□□□□□ -0.06
PCDH1-203ENST00000394536 HAVCR1Q96D42 359 aa14.7□□□□□ -0.06
PCDH1-203ENST00000394536 RADILQ96JH8 1075 aa14.7□□□□□ -0.06
PCDH1-203ENST00000394536 ZNF223Q9UK11 482 aaPredicted RBP14.7□□□□□ -0.06
PCDH1-203ENST00000394536 TMEM235A6NFC5 223 aa14.69□□□□□ -0.06
PCDH1-203ENST00000394536 NKX2-2O95096 273 aa14.69□□□□□ -0.06
PCDH1-203ENST00000394536 UTS2O95399 124 aa14.69□□□□□ -0.06
PCDH1-203ENST00000394536 PRKACAP17612 351 aa14.69□□□□□ -0.06
PCDH1-203ENST00000394536 AGTR1P30556 359 aa14.69□□□□□ -0.06
PCDH1-203ENST00000394536 NANOS3P60323 173 aaKnown RBP14.69□□□□□ -0.06
PCDH1-203ENST00000394536 SNRPNP63162 240 aaKnown RBP14.69□□□□□ -0.06
PCDH1-203ENST00000394536 GPR139Q6DWJ6 353 aa14.69□□□□□ -0.06
PCDH1-203ENST00000394536 GLDNQ6ZMI3 551 aaPredicted RBP14.69□□□□□ -0.06
PCDH1-203ENST00000394536 MRGPREQ86SM8 312 aa14.69□□□□□ -0.06
PCDH1-203ENST00000394536 IQCF2Q8IXL9 164 aa14.69□□□□□ -0.06
PCDH1-203ENST00000394536 C19orf47Q8N9M1 422 aaKnown RBP14.69□□□□□ -0.06
PCDH1-203ENST00000394536 OR2AK2Q8NG84 335 aa14.69□□□□□ -0.06
PCDH1-203ENST00000394536 PHYHIPQ92561 330 aa14.69□□□□□ -0.06
PCDH1-203ENST00000394536 PPP1R14AQ96A00 147 aa14.69□□□□□ -0.06
PCDH1-203ENST00000394536 RBP7Q96R05 134 aa14.69□□□□□ -0.06
PCDH1-203ENST00000394536 MS4A7Q9GZW8 240 aaPredicted RBP14.69□□□□□ -0.06
PCDH1-203ENST00000394536 POFUT1Q9H488 388 aa14.69□□□□□ -0.06
PCDH1-203ENST00000394536 SLCO1C1Q9NYB5 712 aa14.69□□□□□ -0.06
PCDH1-203ENST00000394536 DTX4Q9Y2E6 619 aa14.69□□□□□ -0.06
PCDH1-203ENST00000394536 AGPAT2O15120 278 aa14.69□□□□□ -0.06
PCDH1-203ENST00000394536 PLRG1O43660 514 aaKnown RBP14.69□□□□□ -0.06
PCDH1-203ENST00000394536 SULT1B1O43704 296 aa14.69□□□□□ -0.06
PCDH1-203ENST00000394536 SFTPBP07988 381 aa14.69□□□□□ -0.06
PCDH1-203ENST00000394536 ITGA5P08648 1049 aa14.69□□□□□ -0.06
PCDH1-203ENST00000394536 POU3F2P20265 443 aaPredicted RBP14.69□□□□□ -0.06
PCDH1-203ENST00000394536 EFNB1P98172 346 aa14.69□□□□□ -0.06
PCDH1-203ENST00000394536 GLO1Q04760 184 aa14.69□□□□□ -0.06
PCDH1-203ENST00000394536 PWWP2BQ6NUJ5 590 aa14.69□□□□□ -0.06
PCDH1-203ENST00000394536 KTI12Q96EK9 354 aaPredicted RBP14.69□□□□□ -0.06
PCDH1-203ENST00000394536 KLRF1Q9NZS2 232 aa14.69□□□□□ -0.06
PCDH1-203ENST00000394536 MBD2Q9UBB5 411 aa14.69□□□□□ -0.06
PCDH1-203ENST00000394536 ST6GALNAC2Q9UJ37 374 aa14.69□□□□□ -0.06
PCDH1-203ENST00000394536 A0A087WUJ7 227 aa14.69□□□□□ -0.06
PCDH1-203ENST00000394536 CELA2BP08218 269 aaPredicted RBP14.69□□□□□ -0.06
PCDH1-203ENST00000394536 ACHEP22303 614 aa14.69□□□□□ -0.06
PCDH1-203ENST00000394536 HTR2CP28335 458 aa14.69□□□□□ -0.06
PCDH1-203ENST00000394536 HTRA4P83105 476 aaPredicted RBP14.69□□□□□ -0.06
PCDH1-203ENST00000394536 KLF9Q13886 244 aaPredicted RBP14.69□□□□□ -0.06
PCDH1-203ENST00000394536 DEFB133Q30KQ1 61 aa14.69□□□□□ -0.06
PCDH1-203ENST00000394536 SLC35D3Q5M8T2 416 aa14.69□□□□□ -0.06
PCDH1-203ENST00000394536 TMEM17Q86X19 198 aa14.69□□□□□ -0.06
PCDH1-203ENST00000394536 SPAG16Q8N0X2 631 aa14.69□□□□□ -0.06
PCDH1-203ENST00000394536 OR51A4Q8NGJ6 313 aa14.69□□□□□ -0.06
PCDH1-203ENST00000394536 NT5CQ8TCD5 201 aa14.69□□□□□ -0.06
PCDH1-203ENST00000394536 SORCS2Q96PQ0 1159 aa14.69□□□□□ -0.06
PCDH1-203ENST00000394536 OR11A1Q9GZK7 315 aa14.69□□□□□ -0.06
PCDH1-203ENST00000394536 NXF5Q9H1B4 397 aaKnown RBP14.69□□□□□ -0.06
PCDH1-203ENST00000394536 C2orf42Q9NWW7 574 aa14.69□□□□□ -0.06
PCDH1-203ENST00000394536 FBXO9Q9UK97 447 aaPredicted RBP14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms