RNA–Protein interactions for RNA: ENST00000394456.9

GTF2F1-201, Transcript of general transcription factor IIF subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2F1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-201ENST00000394456 POU3F2P20265 443 aaPredicted RBP12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 SQSTM1Q13501 440 aa12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 CBFBQ13951 182 aa12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 Q499Y3 187 aa12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 TCTE1Q5JU00 501 aa12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 SLC35D3Q5M8T2 416 aa12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 SLC22A10Q63ZE4 541 aa12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 ASPHD2Q6ICH7 369 aa12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 SHISA6Q6ZSJ9 500 aa12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 SLC25A45Q8N413 288 aa12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 FAM71CQ8NEG0 241 aa12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 OR51D1Q8NGF3 324 aa12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 TMEM106AQ96A25 262 aa12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 PCED1AQ9H1Q7 454 aa12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 NOX3Q9HBY0 568 aa12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 LANCL2Q9NS86 450 aa12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 PIPOXQ9P0Z9 390 aa12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 KLHL9Q9P2J3 617 aa12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 GRHPRQ9UBQ7 328 aa12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 ZNF69Q9UC07 566 aa12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 LAMP5Q9UJQ1 280 aa12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 IGHV1OR21-1A0A087WYE8 117 aa12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 RPS10-NUDT3A0A1W2PQS6 291 aa12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 C2orf72A6NCS6 295 aa12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 GABARAPH6UMI1 98 aa12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 HCRTR2O43614 444 aa12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 RGS11O94810 467 aa12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 CRYZL1O95825 349 aa12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 FOSL2P15408 326 aa12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 ARL4DP49703 201 aa12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 AFF3P51826 1226 aaKnown RBP12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 PRPS1P60891 318 aa12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 VWA2Q5GFL6 755 aa12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 OR5M10Q6IEU7 315 aa12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 SEZ6L2Q6UXD5 910 aa12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 WDFY1Q8IWB7 410 aa12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 ZNF676Q8N7Q3 588 aa12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 OR2G2Q8NGZ5 317 aa12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 FCAMRQ8WWV6 532 aa12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 DVL3Q92997 716 aaPredicted RBP12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 CCDC74AQ96AQ1 378 aa12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 CCDC120Q96HB5 630 aa12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 GPX7Q96SL4 187 aaPredicted RBP12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 NARFLQ9H6Q4 476 aa12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 UBQLN4Q9NRR5 601 aa12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 CUTCQ9NTM9 273 aa12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 MGAT4CQ9UBM8 478 aa12.19□□□□□ -0.46
GTF2F1-201ENST00000394456 K7ESF4 209 aa12.18□□□□□ -0.46
GTF2F1-201ENST00000394456 ZNF264O43296 627 aa12.18□□□□□ -0.46
GTF2F1-201ENST00000394456 MPZL1O95297 269 aa12.18□□□□□ -0.46
GTF2F1-201ENST00000394456 PNPP00491 289 aa12.18□□□□□ -0.46
GTF2F1-201ENST00000394456 VSIG10L2P0DP72 767 aa12.18□□□□□ -0.46
GTF2F1-201ENST00000394456 CSF2RBP32927 897 aa12.18□□□□□ -0.46
GTF2F1-201ENST00000394456 CXCL12P48061 93 aa12.18□□□□□ -0.46
GTF2F1-201ENST00000394456 PUDPQ08623 228 aa12.18□□□□□ -0.46
GTF2F1-201ENST00000394456 ESCO2Q56NI9 601 aa12.18□□□□□ -0.46
GTF2F1-201ENST00000394456 HACD4Q5VWC8 232 aa12.18□□□□□ -0.46
GTF2F1-201ENST00000394456 ZNF782Q6ZMW2 699 aaPredicted RBP12.18□□□□□ -0.46
GTF2F1-201ENST00000394456 C17orf50Q8WW18 174 aa12.18□□□□□ -0.46
GTF2F1-201ENST00000394456 NSMAFQ92636 917 aa12.18□□□□□ -0.46
GTF2F1-201ENST00000394456 HGDQ93099 445 aa12.18□□□□□ -0.46
GTF2F1-201ENST00000394456 ANKRD20A5PA0PJZ0 165 aa12.18□□□□□ -0.46
GTF2F1-201ENST00000394456 PYCARD-AS1I3L0S3 204 aa12.18□□□□□ -0.46
GTF2F1-201ENST00000394456 SCDO00767 359 aa12.18□□□□□ -0.46
GTF2F1-201ENST00000394456 ZNF749O43361 778 aa12.18□□□□□ -0.46
GTF2F1-201ENST00000394456 ITGA10O75578 1167 aa12.18□□□□□ -0.46
GTF2F1-201ENST00000394456 NUDT14O95848 222 aa12.18□□□□□ -0.46
GTF2F1-201ENST00000394456 IFI6P09912 130 aa12.18□□□□□ -0.46
GTF2F1-201ENST00000394456 CXCL2P19875 107 aa12.18□□□□□ -0.46
GTF2F1-201ENST00000394456 IL11P20809 199 aa12.18□□□□□ -0.46
GTF2F1-201ENST00000394456 HSD17B7P56937 341 aa12.18□□□□□ -0.46
GTF2F1-201ENST00000394456 TSPAN5P62079 268 aa12.18□□□□□ -0.46
GTF2F1-201ENST00000394456 WDR38Q5JTN6 314 aa12.18□□□□□ -0.46
GTF2F1-201ENST00000394456 SFRP5Q5T4F7 317 aa12.18□□□□□ -0.46
GTF2F1-201ENST00000394456 FAM220AQ7Z4H9 259 aa12.18□□□□□ -0.46
GTF2F1-201ENST00000394456 SLC38A6Q8IZM9 456 aa12.18□□□□□ -0.46
GTF2F1-201ENST00000394456 S100A16Q96FQ6 103 aaKnown RBP12.18□□□□□ -0.46
GTF2F1-201ENST00000394456 NUDT9Q9BW91 350 aa12.18□□□□□ -0.46
GTF2F1-201ENST00000394456 OR11A1Q9GZK7 315 aa12.18□□□□□ -0.46
GTF2F1-201ENST00000394456 PLEKHA1Q9HB21 404 aa12.18□□□□□ -0.46
GTF2F1-201ENST00000394456 B3GNT2Q9NY97 397 aa12.18□□□□□ -0.46
GTF2F1-201ENST00000394456 TAS2R10Q9NYW0 307 aa12.18□□□□□ -0.46
GTF2F1-201ENST00000394456 TAS2R5Q9NYW4 299 aa12.18□□□□□ -0.46
GTF2F1-201ENST00000394456 SMAD9O15198 467 aaKnown RBP12.17□□□□□ -0.46
GTF2F1-201ENST00000394456 HLA-DQA2P01906 255 aa12.17□□□□□ -0.46
GTF2F1-201ENST00000394456 ALOX5APP20292 161 aa12.17□□□□□ -0.46
GTF2F1-201ENST00000394456 CSRP1P21291 193 aaKnown RBP12.17□□□□□ -0.46
GTF2F1-201ENST00000394456 ART1P52961 327 aa12.17□□□□□ -0.46
GTF2F1-201ENST00000394456 GRK1Q15835 563 aa12.17□□□□□ -0.46
GTF2F1-201ENST00000394456 UXS1Q8NBZ7 420 aa12.17□□□□□ -0.46
GTF2F1-201ENST00000394456 OR1L3Q8NH93 324 aa12.17□□□□□ -0.46
GTF2F1-201ENST00000394456 HAVCR1Q96D42 359 aa12.17□□□□□ -0.46
GTF2F1-201ENST00000394456 NXPE2Q96DL1 559 aa12.17□□□□□ -0.46
GTF2F1-201ENST00000394456 COPZ2Q9P299 210 aa12.17□□□□□ -0.46
GTF2F1-201ENST00000394456 EPHA6Q9UF33 1036 aa12.17□□□□□ -0.46
GTF2F1-201ENST00000394456 TRBV5-5A0A0J9YX44 114 aa12.17□□□□□ -0.46
GTF2F1-201ENST00000394456 FOLR1P15328 257 aa12.17□□□□□ -0.46
GTF2F1-201ENST00000394456 NR0B1P51843 470 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms