RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 ZNF208O43345 1280 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 LANCL1O43813 399 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 SCRG1O75711 98 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 AKR7A3O95154 331 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 TCRBP04435 133 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 STOMP27105 288 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 MSX1P28360 303 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 HOXA6P31267 233 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 CCKBRP32239 447 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 APOBEC1P41238 236 aaKnown RBP6.49□□□□□ -1.37
SMAD1-202ENST00000394092 DHPSP49366 369 aaPredicted RBP6.49□□□□□ -1.37
SMAD1-202ENST00000394092 RIDAP52758 137 aaKnown RBP6.49□□□□□ -1.37
SMAD1-202ENST00000394092 EFNA3P52797 238 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 ART1P52961 327 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 DLX5P56178 289 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 DCDP81605 110 aaKnown RBP6.49□□□□□ -1.37
SMAD1-202ENST00000394092 DGCR2P98153 550 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 GLO1Q04760 184 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 ZP4Q12836 540 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 CLPPQ16740 277 aaPredicted RBP6.49□□□□□ -1.37
SMAD1-202ENST00000394092 TMEM69Q5SWH9 247 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 HES5Q5TA89 166 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 PAPD4Q6PIY7 484 aaKnown RBP6.49□□□□□ -1.37
SMAD1-202ENST00000394092 STAC2Q6ZMT1 411 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 KRT77Q7Z794 578 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 BPHLQ86WA6 291 aaPredicted RBP6.49□□□□□ -1.37
SMAD1-202ENST00000394092 ADGRG3Q86Y34 549 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 ZNF679Q8IYX0 411 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 APCDD1LQ8NCL9 501 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 MFSD8Q8NHS3 518 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 TSEN15Q8WW01 171 aaKnown RBP6.49□□□□□ -1.37
SMAD1-202ENST00000394092 RGP1Q92546 391 aaPredicted RBP6.49□□□□□ -1.37
SMAD1-202ENST00000394092 NXPE2Q96DL1 559 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 MAP6Q96JE9 813 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 C4orf45Q96LM5 186 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 ZFP3Q96NJ6 502 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 FYTTD1Q96QD9 318 aaKnown RBP6.49□□□□□ -1.37
SMAD1-202ENST00000394092 OR8B4Q96RC9 309 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 OR6C1Q96RD1 312 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 GFM1Q96RP9 751 aaKnown RBP6.49□□□□□ -1.37
SMAD1-202ENST00000394092 GTPBP2Q9BX10 602 aaKnown RBP6.49□□□□□ -1.37
SMAD1-202ENST00000394092 TSPAN10Q9H1Z9 355 aaPredicted RBP6.49□□□□□ -1.37
SMAD1-202ENST00000394092 MED28Q9H204 178 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 SDHAF3Q9NRP4 125 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 NUDT15Q9NV35 164 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 MCUBQ9NWR8 336 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 PTTG3PQ9NZH4 202 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 FRRS1LQ9P0K9 344 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 KLHL9Q9P2J3 617 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 CDV3Q9UKY7 258 aaKnown RBP6.49□□□□□ -1.37
SMAD1-202ENST00000394092 NPIPA1Q9UND3 350 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 B9D1Q9UPM9 204 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 KLHDC2Q9Y2U9 406 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 RBMX2Q9Y388 322 aaKnown RBP6.49□□□□□ -1.37
SMAD1-202ENST00000394092 ASCC3Q8N3C0 2202 aaKnown RBP6.49□□□□□ -1.37
SMAD1-202ENST00000394092 TRBV5-7A0A0A0MS05 114 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 IGLV1-36A0A0B4J1U3 117 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 TRBV11-1A0A0K0K1C0 115 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 CPED1A4D0V7 1026 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 VSTM2BA6NLU5 285 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 OR4C45A6NMZ5 311 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 C4orf47A7E2U8 309 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 FAM47E-STBD1D6RA91 191 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 ACOT7O00154 380 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 SLC16A7O60669 478 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 PRAF2O60831 178 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 KRT33AO76009 404 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 ONECUT2O95948 504 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 PLGP00747 810 aaPredicted RBP6.49□□□□□ -1.37
SMAD1-202ENST00000394092 CD2P06729 351 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 SPARCP09486 303 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 CD3GP09693 182 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 DPP4P27487 766 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 CFPP27918 469 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 BTCP35070 178 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 FAUP35544 74 aaKnown RBP6.49□□□□□ -1.37
SMAD1-202ENST00000394092 GDNFP39905 211 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 ZNF41P51814 821 aaPredicted RBP6.49□□□□□ -1.37
SMAD1-202ENST00000394092 EMP2P54851 167 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 ADAM8P78325 824 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 IFITM2Q01629 132 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 ROM1Q03395 351 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 PUDPQ08623 228 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 FAPQ12884 760 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 SNTB2Q13425 540 aaKnown RBP6.49□□□□□ -1.37
SMAD1-202ENST00000394092 KLF9Q13886 244 aaPredicted RBP6.49□□□□□ -1.37
SMAD1-202ENST00000394092 SLC17A1Q14916 467 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 SF3B4Q15427 424 aaKnown RBP eCLIP6.49□□□□□ -1.37
SMAD1-202ENST00000394092 SHBQ15464 509 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 SLC36A2Q495M3 483 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 BCL2L15Q5TBC7 163 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 CD276Q5ZPR3 534 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 FAM199XQ6PEV8 388 aaPredicted RBP6.49□□□□□ -1.37
SMAD1-202ENST00000394092 BTN2A1Q7KYR7 527 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 HDDC2Q7Z4H3 204 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 FGD2Q7Z6J4 655 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 SYT9Q86SS6 491 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 LUZP2Q86TE4 346 aa6.49□□□□□ -1.37
SMAD1-202ENST00000394092 GLCCI1Q86VQ1 547 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms