RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 GALNSP34059 522 aa17.07■□□□□ 0.32
CBX1-202ENST00000393408 EFNB2P52799 333 aa17.07■□□□□ 0.32
CBX1-202ENST00000393408 RASGEF1BQ0VAM2 473 aa17.07■□□□□ 0.32
CBX1-202ENST00000393408 ODF4Q2M2E3 257 aa17.07■□□□□ 0.32
CBX1-202ENST00000393408 COL13A1Q5TAT6 717 aaPredicted RBP17.07■□□□□ 0.32
CBX1-202ENST00000393408 TAAR8Q969N4 342 aa17.07■□□□□ 0.32
CBX1-202ENST00000393408 DCBLD2Q96PD2 775 aa17.07■□□□□ 0.32
CBX1-202ENST00000393408 OR1F2PQ96R84 312 aa17.07■□□□□ 0.32
CBX1-202ENST00000393408 AMELYQ99218 206 aa17.07■□□□□ 0.32
CBX1-202ENST00000393408 MAP3K3Q99759 626 aa17.07■□□□□ 0.32
CBX1-202ENST00000393408 GINS4Q9BRT9 223 aa17.07■□□□□ 0.32
CBX1-202ENST00000393408 SYT4Q9H2B2 425 aa17.07■□□□□ 0.32
CBX1-202ENST00000393408 ING1Q9UK53 422 aaPredicted RBP17.07■□□□□ 0.32
CBX1-202ENST00000393408 HSPB2A8KAH6 182 aa17.06■□□□□ 0.32
CBX1-202ENST00000393408 C17orf105B2RV13 164 aa17.06■□□□□ 0.32
CBX1-202ENST00000393408 B4DGG1 531 aa17.06■□□□□ 0.32
CBX1-202ENST00000393408 SUSD5O60279 629 aa17.06■□□□□ 0.32
CBX1-202ENST00000393408 CSF1P09603 554 aa17.06■□□□□ 0.32
CBX1-202ENST00000393408 DRD1P21728 446 aa17.06■□□□□ 0.32
CBX1-202ENST00000393408 DLX5P56178 289 aa17.06■□□□□ 0.32
CBX1-202ENST00000393408 HSPB2Q16082 182 aa17.06■□□□□ 0.32
CBX1-202ENST00000393408 NUP54Q7Z3B4 507 aa17.06■□□□□ 0.32
CBX1-202ENST00000393408 GPAT4Q86UL3 456 aa17.06■□□□□ 0.32
CBX1-202ENST00000393408 ZNF321PQ8N8H1 164 aa17.06■□□□□ 0.32
CBX1-202ENST00000393408 OR51D1Q8NGF3 324 aa17.06■□□□□ 0.32
CBX1-202ENST00000393408 PNPLA2Q96AD5 504 aa17.06■□□□□ 0.32
CBX1-202ENST00000393408 ELF4Q99607 663 aaPredicted RBP17.06■□□□□ 0.32
CBX1-202ENST00000393408 WBP1LQ9NX94 342 aa17.06■□□□□ 0.32
CBX1-202ENST00000393408 RDH8Q9NYR8 311 aa17.06■□□□□ 0.32
CBX1-202ENST00000393408 RGS11O94810 467 aa17.06■□□□□ 0.32
CBX1-202ENST00000393408 HIST1H2ABP04908 130 aa17.06■□□□□ 0.32
CBX1-202ENST00000393408 WDR38Q5JTN6 314 aa17.06■□□□□ 0.32
CBX1-202ENST00000393408 LRRC69Q6ZNQ3 347 aa17.06■□□□□ 0.32
CBX1-202ENST00000393408 HIST3H2AQ7L7L0 130 aa17.06■□□□□ 0.32
CBX1-202ENST00000393408 BIVMQ86UB2 503 aa17.06■□□□□ 0.32
CBX1-202ENST00000393408 OR4D10Q8NGI6 311 aa17.06■□□□□ 0.32
CBX1-202ENST00000393408 HIST1H2ACQ93077 130 aa17.06■□□□□ 0.32
CBX1-202ENST00000393408 TCTN2Q96GX1 697 aa17.06■□□□□ 0.32
CBX1-202ENST00000393408 PELOQ9BRX2 385 aaKnown RBP17.06■□□□□ 0.32
CBX1-202ENST00000393408 ADAM19Q9H013 955 aa17.06■□□□□ 0.32
CBX1-202ENST00000393408 NXF5Q9H1B4 397 aaKnown RBP17.06■□□□□ 0.32
CBX1-202ENST00000393408 TAS2R8Q9NYW2 309 aa17.06■□□□□ 0.32
CBX1-202ENST00000393408 OPN4Q9UHM6 478 aa17.06■□□□□ 0.32
CBX1-202ENST00000393408 PIAS3Q9Y6X2 628 aa17.06■□□□□ 0.32
CBX1-202ENST00000393408 hCG_1807616A0A1W2PRN6 198 aa17.05■□□□□ 0.32
CBX1-202ENST00000393408 SLC37A1P57057 533 aa17.05■□□□□ 0.32
CBX1-202ENST00000393408 SEC61A1P61619 476 aaKnown RBP17.05■□□□□ 0.32
CBX1-202ENST00000393408 SERTAD2Q14140 314 aa17.05■□□□□ 0.32
CBX1-202ENST00000393408 C2orf68Q2NKX9 166 aa17.05■□□□□ 0.32
CBX1-202ENST00000393408 PM20D2Q8IYS1 436 aa17.05■□□□□ 0.32
CBX1-202ENST00000393408 SPERTQ8NA61 448 aa17.05■□□□□ 0.32
CBX1-202ENST00000393408 OR5M1Q8NGP8 315 aa17.05■□□□□ 0.32
CBX1-202ENST00000393408 ZNF563Q8TA94 476 aa17.05■□□□□ 0.32
CBX1-202ENST00000393408 ZNF285Q96NJ3 590 aa17.05■□□□□ 0.32
CBX1-202ENST00000393408 KCNG2Q9UJ96 466 aa17.05■□□□□ 0.32
CBX1-202ENST00000393408 UBE2QL1A1L167 161 aa17.05■□□□□ 0.32
CBX1-202ENST00000393408 PHYHO14832 338 aa17.05■□□□□ 0.32
CBX1-202ENST00000393408 ACSM4P0C7M7 580 aa17.05■□□□□ 0.32
CBX1-202ENST00000393408 THEGLP0DJG4 465 aa17.05■□□□□ 0.32
CBX1-202ENST00000393408 CSF2RBP32927 897 aa17.05■□□□□ 0.32
CBX1-202ENST00000393408 PPICP45877 212 aa17.05■□□□□ 0.32
CBX1-202ENST00000393408 GABRA4P48169 554 aa17.05■□□□□ 0.32
CBX1-202ENST00000393408 MAZP56270 477 aaKnown RBP17.05■□□□□ 0.32
CBX1-202ENST00000393408 H2BFSP57053 126 aa17.05■□□□□ 0.32
CBX1-202ENST00000393408 GUCA2AQ02747 115 aa17.05■□□□□ 0.32
CBX1-202ENST00000393408 CCINQ13939 588 aa17.05■□□□□ 0.32
CBX1-202ENST00000393408 HLXQ14774 488 aaPredicted RBP17.05■□□□□ 0.32
CBX1-202ENST00000393408 FDX2Q6P4F2 183 aa17.05■□□□□ 0.32
CBX1-202ENST00000393408 OR6N1Q8NGY5 312 aa17.05■□□□□ 0.32
CBX1-202ENST00000393408 OTOSQ8NHW6 89 aa17.05■□□□□ 0.32
CBX1-202ENST00000393408 PTPMT1Q8WUK0 201 aaPredicted RBP17.05■□□□□ 0.32
CBX1-202ENST00000393408 REG4Q9BYZ8 158 aa17.05■□□□□ 0.32
CBX1-202ENST00000393408 S1PR5Q9H228 398 aa17.05■□□□□ 0.32
CBX1-202ENST00000393408 C12orf10Q9HB07 376 aa17.05■□□□□ 0.32
CBX1-202ENST00000393408 HMSDA8MTL9 139 aa17.04■□□□□ 0.32
CBX1-202ENST00000393408 POU3F4P49335 361 aa17.04■□□□□ 0.32
CBX1-202ENST00000393408 KCNAB1Q14722 419 aa17.04■□□□□ 0.32
CBX1-202ENST00000393408 NKAIN2Q5VXU1 208 aa17.04■□□□□ 0.32
CBX1-202ENST00000393408 ATOH1Q92858 354 aaPredicted RBP17.04■□□□□ 0.32
CBX1-202ENST00000393408 CLIP3Q96DZ5 547 aa17.04■□□□□ 0.32
CBX1-202ENST00000393408 TOE1Q96GM8 510 aaKnown RBP17.04■□□□□ 0.32
CBX1-202ENST00000393408 GPR27Q9NS67 375 aa17.04■□□□□ 0.32
CBX1-202ENST00000393408 SIX6O95475 246 aa17.04■□□□□ 0.32
CBX1-202ENST00000393408 ITGA5P08648 1049 aa17.04■□□□□ 0.32
CBX1-202ENST00000393408 POU3F2P20265 443 aaPredicted RBP17.04■□□□□ 0.32
CBX1-202ENST00000393408 SFRP5Q5T4F7 317 aa17.04■□□□□ 0.32
CBX1-202ENST00000393408 YOD1Q5VVQ6 348 aaPredicted RBP17.04■□□□□ 0.32
CBX1-202ENST00000393408 BPHLQ86WA6 291 aaPredicted RBP17.04■□□□□ 0.32
CBX1-202ENST00000393408 TSEN15Q8WW01 171 aaKnown RBP17.04■□□□□ 0.32
CBX1-202ENST00000393408 OR8B4Q96RC9 309 aa17.04■□□□□ 0.32
CBX1-202ENST00000393408 TRAV18A0A075B6X5 111 aa17.03■□□□□ 0.32
CBX1-202ENST00000393408 KDM4BO94953 1096 aa17.03■□□□□ 0.32
CBX1-202ENST00000393408 BGLAPP02818 100 aa17.03■□□□□ 0.32
CBX1-202ENST00000393408 RLN1P04808 185 aa17.03■□□□□ 0.32
CBX1-202ENST00000393408 S100A11P31949 105 aa17.03■□□□□ 0.32
CBX1-202ENST00000393408 THRSPQ92748 146 aa17.03■□□□□ 0.32
CBX1-202ENST00000393408 RTN4RQ9BZR6 473 aa17.03■□□□□ 0.32
CBX1-202ENST00000393408 LAT2Q9GZY6 243 aa17.03■□□□□ 0.32
CBX1-202ENST00000393408 KCNK15Q9H427 330 aa17.03■□□□□ 0.32
CBX1-202ENST00000393408 ELOVL3Q9HB03 270 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms