RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 NSMAFQ92636 917 aa6.67□□□□□ -1.34
HMGB3P1-201ENST00000393368 PIGTQ969N2 578 aa6.67□□□□□ -1.34
HMGB3P1-201ENST00000393368 MCUR1Q96AQ8 359 aa6.67□□□□□ -1.34
HMGB3P1-201ENST00000393368 BOD1Q96IK1 185 aa6.67□□□□□ -1.34
HMGB3P1-201ENST00000393368 LRR1Q96L50 414 aa6.67□□□□□ -1.34
HMGB3P1-201ENST00000393368 DHRS1Q96LJ7 313 aa6.67□□□□□ -1.34
HMGB3P1-201ENST00000393368 ADAD1Q96M93 576 aaKnown RBP6.67□□□□□ -1.34
HMGB3P1-201ENST00000393368 FUZQ9BT04 418 aa6.67□□□□□ -1.34
HMGB3P1-201ENST00000393368 THTPAQ9BU02 230 aa6.67□□□□□ -1.34
HMGB3P1-201ENST00000393368 KATNB1Q9BVA0 655 aa6.67□□□□□ -1.34
HMGB3P1-201ENST00000393368 MRPL13Q9BYD1 178 aaKnown RBP6.67□□□□□ -1.34
HMGB3P1-201ENST00000393368 TMEM38BQ9NVV0 291 aa6.67□□□□□ -1.34
HMGB3P1-201ENST00000393368 TAS2R1Q9NYW7 299 aa6.67□□□□□ -1.34
HMGB3P1-201ENST00000393368 GDF2Q9UK05 429 aaPredicted RBP6.67□□□□□ -1.34
HMGB3P1-201ENST00000393368 ZNF346Q9UL40 294 aaKnown RBP6.67□□□□□ -1.34
HMGB3P1-201ENST00000393368 RAI1Q7Z5J4 1906 aaPredicted RBP6.67□□□□□ -1.34
HMGB3P1-201ENST00000393368 HIVEP1P15822 2718 aa6.67□□□□□ -1.34
HMGB3P1-201ENST00000393368 PRR14LQ5THK1 2151 aa6.67□□□□□ -1.34
HMGB3P1-201ENST00000393368 AKAP6Q13023 2319 aa6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 SH3PXD2BA1X283 911 aa6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 TRIM64A6NGJ6 449 aa6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 TRIM64BA6NI03 449 aa6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 DHHO43323 396 aa6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 GADD45GO95257 159 aa6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 IGKV3-15P01624 115 aa6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 IGLV1-44P01699 117 aa6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 CBR1P16152 277 aa6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 RPL4P36578 427 aaKnown RBP6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 LIMS1P48059 325 aa6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 GIPRP48546 466 aa6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 FABP6P51161 128 aa6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 FXYD6P3P58550 94 aa6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 RPL27P61353 136 aaKnown RBP6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 NAAAQ02083 359 aa6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 CD47Q08722 323 aa6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 HIST3H3Q16695 136 aa6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 ZBED5Q49AG3 693 aa6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 LCN8Q6JVE9 175 aa6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 KRT80Q6KB66 452 aa6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 TMPRSS11FQ6ZWK6 438 aa6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 RRM2BQ7LG56 351 aa6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 SSX8Q7RTT4 187 aa6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 YTHDF3Q7Z739 585 aaKnown RBP6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 DHFR2Q86XF0 187 aa6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 TGIF2LYQ8IUE0 185 aa6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 ZDHHC21Q8IVQ6 265 aa6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 RNF113BQ8IZP6 322 aaKnown RBP6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 CIARTQ8N365 385 aaPredicted RBP6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 LRRC18Q8N456 261 aa6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 SLC22A24Q8N4F4 322 aa6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 ZNF519Q8TB69 540 aa6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 RASD2Q96D21 266 aa6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 NMD3Q96D46 503 aaKnown RBP6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 RSRC1Q96IZ7 334 aaKnown RBP6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 Q96M85 177 aa6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 Q96MF0 132 aa6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 FOXN4Q96NZ1 517 aa6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 DHRS9Q9BPW9 319 aa6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 TRAF4Q9BUZ4 470 aaPredicted RBP6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 CACNG6Q9BXT2 260 aa6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 TXNIPQ9H3M7 391 aa6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 ANKRD19PQ9H560 264 aa6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 CXorf56Q9H5V9 222 aa6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 OBP2BQ9NPH6 170 aa6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 VNN3Q9NY84 501 aa6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 B3GNT2Q9NY97 397 aa6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 ACTR3BQ9P1U1 418 aa6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 CRNNQ9UBG3 495 aaPredicted RBP6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 PRPF19Q9UMS4 504 aaKnown RBP6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 MGAT4BQ9UQ53 548 aa6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 UGT2A1Q9Y4X1 527 aa6.66□□□□□ -1.34
HMGB3P1-201ENST00000393368 ABCA4P78363 2273 aa6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 IGHV2OR16-5A0A0B4J2B6 119 aa6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 TEX13CA0A0J9YWL9 993 aa6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 UNC119BA6NIH7 251 aa6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 OVOL3O00110 214 aa6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 SOCS2O14508 198 aa6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 GYG2O15488 501 aa6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 ARHGEF9O43307 516 aa6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 OR10H3O60404 316 aa6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 PPP1R3DO95685 299 aa6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 IGHV4-39P01824 125 aa6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 IGHMP01871 453 aa6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 CRYAAP02489 173 aa6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 CCL2P13500 99 aa6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 CD99P14209 185 aa6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 ITGA2P17301 1181 aa6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 TTKP33981 857 aa6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 ATP5J2P56134 94 aa6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 RAB1AP62820 205 aa6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 HGFACQ04756 655 aa6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 TRIM25Q14258 630 aaKnown RBP6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 RAB39AQ14964 217 aa6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 ETFDHQ16134 617 aa6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 GSG1Q2KHT4 349 aa6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 SPATS1Q496A3 300 aa6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 MESTQ5EB52 335 aa6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 C11orf71Q6IPW1 123 aa6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 ZNF627Q7L945 461 aa6.65□□□□□ -1.34
HMGB3P1-201ENST00000393368 ZER1Q7Z7L7 766 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms