RNA–Protein interactions for RNA: ENST00000391014.1

RNU6-1228P-201, Transcript of RNA, U6 small nuclear 1228, pseudogene, humanhuman

BASIC

Gene RNU6-1228P, Length 107 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1228P-201ENST00000391014 IGHV1OR15-9A0A0B4J2B8 117 aa0.1□□□□□ -2.39
RNU6-1228P-201ENST00000391014 ARHGAP42A6NI28 874 aa0.1□□□□□ -2.39
RNU6-1228P-201ENST00000391014 CLDN5O00501 218 aa0.1□□□□□ -2.39
RNU6-1228P-201ENST00000391014 DNALI1O14645 258 aaPredicted RBP0.1□□□□□ -2.39
RNU6-1228P-201ENST00000391014 CHST10O43529 356 aa0.1□□□□□ -2.39
RNU6-1228P-201ENST00000391014 H6PDO95479 791 aa0.1□□□□□ -2.39
RNU6-1228P-201ENST00000391014 NDUFB10O96000 172 aa0.1□□□□□ -2.39
RNU6-1228P-201ENST00000391014 HLA-DQB1P01920 261 aa0.1□□□□□ -2.39
RNU6-1228P-201ENST00000391014 UBTFL6P0CB48 400 aaPredicted RBP0.1□□□□□ -2.39
RNU6-1228P-201ENST00000391014 INAFM2P0DMQ5 153 aa0.1□□□□□ -2.39
RNU6-1228P-201ENST00000391014 RRASP10301 218 aa0.1□□□□□ -2.39
RNU6-1228P-201ENST00000391014 AK4P27144 223 aaPredicted RBP0.1□□□□□ -2.39
RNU6-1228P-201ENST00000391014 DDOSTP39656 456 aa0.1□□□□□ -2.39
RNU6-1228P-201ENST00000391014 GALR1P47211 349 aa0.1□□□□□ -2.39
RNU6-1228P-201ENST00000391014 TP53I3Q53FA7 332 aa0.1□□□□□ -2.39
RNU6-1228P-201ENST00000391014 THEM4Q5T1C6 240 aa0.1□□□□□ -2.39
RNU6-1228P-201ENST00000391014 STUMQ69YW2 141 aa0.1□□□□□ -2.39
RNU6-1228P-201ENST00000391014 ERASQ7Z444 233 aa0.1□□□□□ -2.39
RNU6-1228P-201ENST00000391014 SGPP2Q8IWX5 399 aa0.1□□□□□ -2.39
RNU6-1228P-201ENST00000391014 RNF148Q8N7C7 305 aa0.1□□□□□ -2.39
RNU6-1228P-201ENST00000391014 DENND6BQ8NEG7 585 aa0.1□□□□□ -2.39
RNU6-1228P-201ENST00000391014 URGCPQ8TCY9 931 aa0.1□□□□□ -2.39
RNU6-1228P-201ENST00000391014 N4BP2L2Q92802 583 aaPredicted RBP0.1□□□□□ -2.39
RNU6-1228P-201ENST00000391014 ZNF488Q96MN9 340 aa0.1□□□□□ -2.39
RNU6-1228P-201ENST00000391014 SEC22CQ9BRL7 303 aa0.1□□□□□ -2.39
RNU6-1228P-201ENST00000391014 NIPSNAP3BQ9BS92 247 aa0.1□□□□□ -2.39
RNU6-1228P-201ENST00000391014 TUBGCP2Q9BSJ2 902 aa0.1□□□□□ -2.39
RNU6-1228P-201ENST00000391014 NXF5Q9H1B4 397 aaKnown RBP0.1□□□□□ -2.39
RNU6-1228P-201ENST00000391014 RBKSQ9H477 322 aa0.1□□□□□ -2.39
RNU6-1228P-201ENST00000391014 REEP4Q9H6H4 257 aa0.1□□□□□ -2.39
RNU6-1228P-201ENST00000391014 ECT2Q9H8V3 914 aa0.1□□□□□ -2.39
RNU6-1228P-201ENST00000391014 EDA2RQ9HAV5 297 aa0.1□□□□□ -2.39
RNU6-1228P-201ENST00000391014 ASF1BQ9NVP2 202 aa0.1□□□□□ -2.39
RNU6-1228P-201ENST00000391014 CGNQ9P2M7 1197 aaKnown RBP0.1□□□□□ -2.39
RNU6-1228P-201ENST00000391014 AK6Q9Y3D8 172 aaKnown RBP0.1□□□□□ -2.39
RNU6-1228P-201ENST00000391014 STRAPQ9Y3F4 350 aaKnown RBP0.1□□□□□ -2.39
RNU6-1228P-201ENST00000391014 N6AMT1Q9Y5N5 214 aa0.1□□□□□ -2.39
RNU6-1228P-201ENST00000391014 MACF1Q9UPN3 7388 aaKnown RBP0.09□□□□□ -2.39
RNU6-1228P-201ENST00000391014 TRAV39A0A0B4J263 110 aa0.09□□□□□ -2.4
RNU6-1228P-201ENST00000391014 MFNGO00587 321 aa0.09□□□□□ -2.4
RNU6-1228P-201ENST00000391014 SSX5O60225 188 aa0.09□□□□□ -2.4
RNU6-1228P-201ENST00000391014 UPK3AO75631 287 aa0.09□□□□□ -2.4
RNU6-1228P-201ENST00000391014 LRATO95237 230 aa0.09□□□□□ -2.4
RNU6-1228P-201ENST00000391014 CYB5R3P00387 301 aaPredicted RBP0.09□□□□□ -2.4
RNU6-1228P-201ENST00000391014 IGLV7-43P04211 117 aa0.09□□□□□ -2.4
RNU6-1228P-201ENST00000391014 ME2P23368 584 aa0.09□□□□□ -2.4
RNU6-1228P-201ENST00000391014 RORAP35398 523 aa0.09□□□□□ -2.4
RNU6-1228P-201ENST00000391014 HPCAL1P37235 193 aa0.09□□□□□ -2.4
RNU6-1228P-201ENST00000391014 AQP2P41181 271 aa0.09□□□□□ -2.4
RNU6-1228P-201ENST00000391014 CDKN2BP42772 138 aa0.09□□□□□ -2.4
RNU6-1228P-201ENST00000391014 SYKP43405 635 aa0.09□□□□□ -2.4
RNU6-1228P-201ENST00000391014 TNNT3P45378 269 aaPredicted RBP0.09□□□□□ -2.4
RNU6-1228P-201ENST00000391014 UGT2B15P54855 530 aa0.09□□□□□ -2.4
RNU6-1228P-201ENST00000391014 PPIDQ08752 370 aaKnown RBP0.09□□□□□ -2.4
RNU6-1228P-201ENST00000391014 TRIP10Q15642 601 aa0.09□□□□□ -2.4
RNU6-1228P-201ENST00000391014 SLC25A52Q3SY17 297 aa0.09□□□□□ -2.4
RNU6-1228P-201ENST00000391014 CARD16Q5EG05 197 aa0.09□□□□□ -2.4
RNU6-1228P-201ENST00000391014 LDLRAP1Q5SW96 308 aa0.09□□□□□ -2.4
RNU6-1228P-201ENST00000391014 OR52E8Q6IFG1 317 aa0.09□□□□□ -2.4
RNU6-1228P-201ENST00000391014 DPY19L4Q7Z388 723 aa0.09□□□□□ -2.4
RNU6-1228P-201ENST00000391014 KIAA1328Q86T90 577 aa0.09□□□□□ -2.4
RNU6-1228P-201ENST00000391014 TICAM2Q86XR7 235 aa0.09□□□□□ -2.4
RNU6-1228P-201ENST00000391014 C10orf53Q8N6V4 93 aa0.09□□□□□ -2.4
RNU6-1228P-201ENST00000391014 SLC35G3Q8N808 338 aa0.09□□□□□ -2.4
RNU6-1228P-201ENST00000391014 ZNF502Q8TBZ5 544 aa0.09□□□□□ -2.4
RNU6-1228P-201ENST00000391014 SDR42E1Q8WUS8 393 aa0.09□□□□□ -2.4
RNU6-1228P-201ENST00000391014 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP0.09□□□□□ -2.4
RNU6-1228P-201ENST00000391014 FCGR1BQ92637 280 aa0.09□□□□□ -2.4
RNU6-1228P-201ENST00000391014 DUS3LQ96G46 650 aaKnown RBP0.09□□□□□ -2.4
RNU6-1228P-201ENST00000391014 OXGR1Q96P68 337 aa0.09□□□□□ -2.4
RNU6-1228P-201ENST00000391014 ABCG5Q9H222 651 aa0.09□□□□□ -2.4
RNU6-1228P-201ENST00000391014 ROPN1Q9HAT0 212 aaPredicted RBP0.09□□□□□ -2.4
RNU6-1228P-201ENST00000391014 POPDC2Q9HBU9 364 aa0.09□□□□□ -2.4
RNU6-1228P-201ENST00000391014 GIN1Q9NXP7 522 aa0.09□□□□□ -2.4
RNU6-1228P-201ENST00000391014 MMP17Q9ULZ9 603 aa0.09□□□□□ -2.4
RNU6-1228P-201ENST00000391014 TSSC4Q9Y5U2 329 aaPredicted RBP0.09□□□□□ -2.4
RNU6-1228P-201ENST00000391014 ADGRA3Q8IWK6 1321 aa0.09□□□□□ -2.4
RNU6-1228P-201ENST00000391014 TRIP11Q15643 1979 aa0.08□□□□□ -2.4
RNU6-1228P-201ENST00000391014 MALRD1Q5VYJ5 2156 aa0.08□□□□□ -2.4
RNU6-1228P-201ENST00000391014 IGLV3-22A0A075B6J6 115 aa0.08□□□□□ -2.4
RNU6-1228P-201ENST00000391014 HMGB1P1B2RPK0 211 aaPredicted RBP0.08□□□□□ -2.4
RNU6-1228P-201ENST00000391014 MGRN1O60291 552 aa0.08□□□□□ -2.4
RNU6-1228P-201ENST00000391014 KINO60870 393 aaKnown RBP0.08□□□□□ -2.4
RNU6-1228P-201ENST00000391014 ZNF35P13682 527 aa0.08□□□□□ -2.4
RNU6-1228P-201ENST00000391014 CCDC130P13994 396 aa0.08□□□□□ -2.4
RNU6-1228P-201ENST00000391014 TCN1P20061 433 aaPredicted RBP0.08□□□□□ -2.4
RNU6-1228P-201ENST00000391014 CSRP1P21291 193 aaKnown RBP0.08□□□□□ -2.4
RNU6-1228P-201ENST00000391014 SUB1P53999 127 aaKnown RBP eCLIP0.08□□□□□ -2.4
RNU6-1228P-201ENST00000391014 ATP1B3P54709 279 aa0.08□□□□□ -2.4
RNU6-1228P-201ENST00000391014 SLC26A5P58743 744 aa0.08□□□□□ -2.4
RNU6-1228P-201ENST00000391014 LASP1Q14847 261 aaKnown RBP0.08□□□□□ -2.4
RNU6-1228P-201ENST00000391014 SLC15A2Q16348 729 aa0.08□□□□□ -2.4
RNU6-1228P-201ENST00000391014 CCDC40Q4G0X9 1142 aa0.08□□□□□ -2.4
RNU6-1228P-201ENST00000391014 ARMC3Q5W041 872 aa0.08□□□□□ -2.4
RNU6-1228P-201ENST00000391014 TPGS2Q68CL5 300 aa0.08□□□□□ -2.4
RNU6-1228P-201ENST00000391014 AMMECR1LQ6DCA0 310 aa0.08□□□□□ -2.4
RNU6-1228P-201ENST00000391014 LRRC8BQ6P9F7 803 aa0.08□□□□□ -2.4
RNU6-1228P-201ENST00000391014 CNIH2Q6PI25 160 aa0.08□□□□□ -2.4
RNU6-1228P-201ENST00000391014 SNX20Q7Z614 316 aa0.08□□□□□ -2.4
RNU6-1228P-201ENST00000391014 CCDC50Q8IVM0 306 aa0.08□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms