RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 LINC00336Q6ZUF6 198 aa5.41□□□□□ -1.54
TRAV35-201ENST00000390462 MTURNQ8N3F0 131 aa5.41□□□□□ -1.54
TRAV35-201ENST00000390462 NECAP1Q8NC96 275 aa5.41□□□□□ -1.54
TRAV35-201ENST00000390462 NOXO1Q8NFA2 376 aa5.41□□□□□ -1.54
TRAV35-201ENST00000390462 OR2L8Q8NGY9 312 aa5.41□□□□□ -1.54
TRAV35-201ENST00000390462 PRSS3P2Q8NHM4 247 aa5.41□□□□□ -1.54
TRAV35-201ENST00000390462 ZPLD1Q8TCW7 415 aa5.41□□□□□ -1.54
TRAV35-201ENST00000390462 GATAD1Q8WUU5 269 aa5.41□□□□□ -1.54
TRAV35-201ENST00000390462 FAM218AQ96MZ4 157 aa5.41□□□□□ -1.54
TRAV35-201ENST00000390462 ALKBH3Q96Q83 286 aaPredicted RBP5.41□□□□□ -1.54
TRAV35-201ENST00000390462 TSG101Q99816 390 aa5.41□□□□□ -1.54
TRAV35-201ENST00000390462 PARD6GQ9BYG4 376 aaPredicted RBP5.41□□□□□ -1.54
TRAV35-201ENST00000390462 PRSS22Q9GZN4 317 aa5.41□□□□□ -1.54
TRAV35-201ENST00000390462 RBM38Q9H0Z9 239 aaKnown RBP5.41□□□□□ -1.54
TRAV35-201ENST00000390462 NT5DC2Q9H857 520 aa5.41□□□□□ -1.54
TRAV35-201ENST00000390462 TREX1Q9NSU2 369 aa5.41□□□□□ -1.54
TRAV35-201ENST00000390462 ZNF282Q9UDV7 671 aaPredicted RBP5.41□□□□□ -1.54
TRAV35-201ENST00000390462 RANBP2P49792 3224 aaKnown RBP5.41□□□□□ -1.54
TRAV35-201ENST00000390462 ZNF521Q96K83 1311 aa5.41□□□□□ -1.54
TRAV35-201ENST00000390462 UNC80Q8N2C7 3258 aa5.4□□□□□ -1.54
TRAV35-201ENST00000390462 GOLGA8IPA6NC78 632 aa5.4□□□□□ -1.54
TRAV35-201ENST00000390462 F8VP50 259 aa5.4□□□□□ -1.54
TRAV35-201ENST00000390462 KLRC4-KLRK1H3BQV0 150 aa5.4□□□□□ -1.54
TRAV35-201ENST00000390462 LIN7AO14910 233 aaPredicted RBP5.4□□□□□ -1.54
TRAV35-201ENST00000390462 PPP1R2P9O14990 202 aa5.4□□□□□ -1.54
TRAV35-201ENST00000390462 TOX3O15405 576 aaPredicted RBP5.4□□□□□ -1.54
TRAV35-201ENST00000390462 TNFSF12O43508 249 aa5.4□□□□□ -1.54
TRAV35-201ENST00000390462 TYROBPO43914 113 aa5.4□□□□□ -1.54
TRAV35-201ENST00000390462 LDOC1O95751 146 aaPredicted RBP5.4□□□□□ -1.54
TRAV35-201ENST00000390462 CDK4P11802 303 aa5.4□□□□□ -1.54
TRAV35-201ENST00000390462 YAP1P46937 504 aaKnown RBP5.4□□□□□ -1.54
TRAV35-201ENST00000390462 HOXA1P49639 335 aaPredicted RBP5.4□□□□□ -1.54
TRAV35-201ENST00000390462 MLF1P58340 268 aa5.4□□□□□ -1.54
TRAV35-201ENST00000390462 RPS14P62263 151 aaKnown RBP5.4□□□□□ -1.54
TRAV35-201ENST00000390462 OR5I1Q13606 314 aa5.4□□□□□ -1.54
TRAV35-201ENST00000390462 OXA1LQ15070 435 aa5.4□□□□□ -1.54
TRAV35-201ENST00000390462 CARD16Q5EG05 197 aa5.4□□□□□ -1.54
TRAV35-201ENST00000390462 FAM120AOSQ5T036 256 aa5.4□□□□□ -1.54
TRAV35-201ENST00000390462 APOBEC3HQ6NTF7 200 aaKnown RBP5.4□□□□□ -1.54
TRAV35-201ENST00000390462 FAM199XQ6PEV8 388 aaPredicted RBP5.4□□□□□ -1.54
TRAV35-201ENST00000390462 CRLF3Q8IUI8 442 aa5.4□□□□□ -1.54
TRAV35-201ENST00000390462 BOD1L2Q8IYS8 172 aa5.4□□□□□ -1.54
TRAV35-201ENST00000390462 LIX1Q8N485 282 aa5.4□□□□□ -1.54
TRAV35-201ENST00000390462 CDRT4Q8N9R6 151 aa5.4□□□□□ -1.54
TRAV35-201ENST00000390462 OR2T33Q8NG76 320 aa5.4□□□□□ -1.54
TRAV35-201ENST00000390462 OR5T2Q8NGG2 359 aa5.4□□□□□ -1.54
TRAV35-201ENST00000390462 PCNPQ8WW12 178 aaKnown RBP5.4□□□□□ -1.54
TRAV35-201ENST00000390462 TMED6Q8WW62 240 aa5.4□□□□□ -1.54
TRAV35-201ENST00000390462 BAALCQ8WXS3 180 aa5.4□□□□□ -1.54
TRAV35-201ENST00000390462 OXGR1Q96P68 337 aa5.4□□□□□ -1.54
TRAV35-201ENST00000390462 TNFRSF13CQ96RJ3 184 aa5.4□□□□□ -1.54
TRAV35-201ENST00000390462 BDH2Q9BUT1 245 aa5.4□□□□□ -1.54
TRAV35-201ENST00000390462 NAT10Q9H0A0 1025 aaKnown RBP5.4□□□□□ -1.54
TRAV35-201ENST00000390462 RBKSQ9H477 322 aa5.4□□□□□ -1.54
TRAV35-201ENST00000390462 WDR55Q9H6Y2 383 aaPredicted RBP5.4□□□□□ -1.54
TRAV35-201ENST00000390462 PATZ1Q9HBE1 687 aaKnown RBP5.4□□□□□ -1.54
TRAV35-201ENST00000390462 ADGRL4Q9HBW9 690 aa5.4□□□□□ -1.54
TRAV35-201ENST00000390462 SAMSN1Q9NSI8 373 aaKnown RBP5.4□□□□□ -1.54
TRAV35-201ENST00000390462 CIDEBQ9UHD4 219 aa5.4□□□□□ -1.54
TRAV35-201ENST00000390462 KDM3BQ7LBC6 1761 aa5.39□□□□□ -1.55
TRAV35-201ENST00000390462 MRC1P22897 1456 aa5.39□□□□□ -1.55
TRAV35-201ENST00000390462 FRMPD3Q5JV73 1810 aa5.39□□□□□ -1.55
TRAV35-201ENST00000390462 CLEC18AA5D8T8 446 aa5.39□□□□□ -1.55
TRAV35-201ENST00000390462 MYMKA6NI61 221 aa5.39□□□□□ -1.55
TRAV35-201ENST00000390462 PP2D1A8MPX8 630 aa5.39□□□□□ -1.55
TRAV35-201ENST00000390462 VGLL3A8MV65 326 aa5.39□□□□□ -1.55
TRAV35-201ENST00000390462 GFYI3L273 518 aa5.39□□□□□ -1.55
TRAV35-201ENST00000390462 PRMT5O14744 637 aaPredicted RBP5.39□□□□□ -1.55
TRAV35-201ENST00000390462 PRKYO43930 277 aa5.39□□□□□ -1.55
TRAV35-201ENST00000390462 PCDH7O60245 1069 aa5.39□□□□□ -1.55
TRAV35-201ENST00000390462 PLEKHA8P1O95397 391 aa5.39□□□□□ -1.55
TRAV35-201ENST00000390462 LGALS2P05162 132 aa5.39□□□□□ -1.55
TRAV35-201ENST00000390462 MYOGP15173 224 aa5.39□□□□□ -1.55
TRAV35-201ENST00000390462 SERPINA2P20848 420 aa5.39□□□□□ -1.55
TRAV35-201ENST00000390462 PPP1R2P41236 205 aa5.39□□□□□ -1.55
TRAV35-201ENST00000390462 MAGEA6P43360 314 aa5.39□□□□□ -1.55
TRAV35-201ENST00000390462 CSNK1A1P48729 337 aa5.39□□□□□ -1.55
TRAV35-201ENST00000390462 PRKXP51817 358 aa5.39□□□□□ -1.55
TRAV35-201ENST00000390462 PROK1P58294 105 aa5.39□□□□□ -1.55
TRAV35-201ENST00000390462 SF3A2Q15428 464 aaKnown RBP5.39□□□□□ -1.55
TRAV35-201ENST00000390462 KYAT1Q16773 422 aa5.39□□□□□ -1.55
TRAV35-201ENST00000390462 PPP1R2P3Q6NXS1 205 aa5.39□□□□□ -1.55
TRAV35-201ENST00000390462 EMBQ6PCB8 327 aa5.39□□□□□ -1.55
TRAV35-201ENST00000390462 CLEC18BQ6UXF7 455 aa5.39□□□□□ -1.55
TRAV35-201ENST00000390462 APOOLQ6UXV4 268 aa5.39□□□□□ -1.55
TRAV35-201ENST00000390462 USP50Q70EL3 339 aaPredicted RBP5.39□□□□□ -1.55
TRAV35-201ENST00000390462 PGAP1Q75T13 922 aa5.39□□□□□ -1.55
TRAV35-201ENST00000390462 CMC1Q7Z7K0 106 aa5.39□□□□□ -1.55
TRAV35-201ENST00000390462 RBM23Q86U06 439 aaKnown RBP5.39□□□□□ -1.55
TRAV35-201ENST00000390462 CLEC18CQ8NCF0 446 aa5.39□□□□□ -1.55
TRAV35-201ENST00000390462 OR5T1Q8NG75 326 aa5.39□□□□□ -1.55
TRAV35-201ENST00000390462 C16orf52Q8NHV5 167 aa5.39□□□□□ -1.55
TRAV35-201ENST00000390462 GTF3AQ92664 365 aaKnown RBP5.39□□□□□ -1.55
TRAV35-201ENST00000390462 ZFP3Q96NJ6 502 aa5.39□□□□□ -1.55
TRAV35-201ENST00000390462 UTP23Q9BRU9 249 aaKnown RBP5.39□□□□□ -1.55
TRAV35-201ENST00000390462 C9orf16Q9BUW7 83 aa5.39□□□□□ -1.55
TRAV35-201ENST00000390462 PITPNM3Q9BZ71 974 aa5.39□□□□□ -1.55
TRAV35-201ENST00000390462 ATP13A3Q9H7F0 1226 aa5.39□□□□□ -1.55
TRAV35-201ENST00000390462 MEPEQ9NQ76 525 aaPredicted RBP5.39□□□□□ -1.55
TRAV35-201ENST00000390462 THUMPD1Q9NXG2 353 aaKnown RBP5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms