RNA–Protein interactions for RNA: ENST00000380701.7

CCDC171-201, Transcript of coiled-coil domain containing 171, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC171, Length 6,512 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-201ENST00000380701 LHPPQ9H008 270 aa6.58□□□□□ -1.36
CCDC171-201ENST00000380701 CXorf36Q9H7Y0 433 aa6.58□□□□□ -1.36
CCDC171-201ENST00000380701 PATZ1Q9HBE1 687 aaKnown RBP6.58□□□□□ -1.36
CCDC171-201ENST00000380701 CHD4Q14839 1912 aa6.58□□□□□ -1.36
CCDC171-201ENST00000380701 ARRDC5A6NEK1 342 aa6.58□□□□□ -1.36
CCDC171-201ENST00000380701 TBX19O60806 448 aa6.58□□□□□ -1.36
CCDC171-201ENST00000380701 F13BP05160 661 aa6.58□□□□□ -1.36
CCDC171-201ENST00000380701 SERPINA7P05543 415 aa6.58□□□□□ -1.36
CCDC171-201ENST00000380701 HOXD4P09016 255 aaPredicted RBP6.58□□□□□ -1.36
CCDC171-201ENST00000380701 PIPP12273 146 aaPredicted RBP6.58□□□□□ -1.36
CCDC171-201ENST00000380701 DRD5P21918 477 aa6.58□□□□□ -1.36
CCDC171-201ENST00000380701 EPHA8P29322 1005 aaPredicted RBP6.58□□□□□ -1.36
CCDC171-201ENST00000380701 LUMP51884 338 aaPredicted RBP6.58□□□□□ -1.36
CCDC171-201ENST00000380701 ZNF136P52737 540 aa6.58□□□□□ -1.36
CCDC171-201ENST00000380701 SPOCK1Q08629 439 aa6.58□□□□□ -1.36
CCDC171-201ENST00000380701 TFAP2EQ6VUC0 442 aa6.58□□□□□ -1.36
CCDC171-201ENST00000380701 MEX3BQ6ZN04 569 aaKnown RBP6.58□□□□□ -1.36
CCDC171-201ENST00000380701 CATSPERDQ86XM0 798 aa6.58□□□□□ -1.36
CCDC171-201ENST00000380701 BPIFB2Q8N4F0 458 aa6.58□□□□□ -1.36
CCDC171-201ENST00000380701 ZNF808Q8N4W9 903 aaPredicted RBP6.58□□□□□ -1.36
CCDC171-201ENST00000380701 OR4D6Q8NGJ1 314 aa6.58□□□□□ -1.36
CCDC171-201ENST00000380701 SLC39A7Q92504 469 aa6.58□□□□□ -1.36
CCDC171-201ENST00000380701 TRMT61AQ96FX7 289 aaKnown RBP6.58□□□□□ -1.36
CCDC171-201ENST00000380701 TNFRSF13CQ96RJ3 184 aa6.58□□□□□ -1.36
CCDC171-201ENST00000380701 KCNJ16Q9NPI9 418 aa6.58□□□□□ -1.36
CCDC171-201ENST00000380701 ACER3Q9NUN7 267 aa6.58□□□□□ -1.36
CCDC171-201ENST00000380701 HCSTQ9UBK5 93 aa6.58□□□□□ -1.36
CCDC171-201ENST00000380701 SLC23A2Q9UGH3 650 aa6.58□□□□□ -1.36
CCDC171-201ENST00000380701 FAM166BA8MTA8 275 aa6.58□□□□□ -1.36
CCDC171-201ENST00000380701 FAM171A2A8MVW0 826 aa6.58□□□□□ -1.36
CCDC171-201ENST00000380701 M0R296 226 aa6.58□□□□□ -1.36
CCDC171-201ENST00000380701 MITFO75030 526 aaPredicted RBP6.58□□□□□ -1.36
CCDC171-201ENST00000380701 ZGLP1P0C6A0 271 aa6.58□□□□□ -1.36
CCDC171-201ENST00000380701 MYOGP15173 224 aa6.58□□□□□ -1.36
CCDC171-201ENST00000380701 ITGB8P26012 769 aa6.58□□□□□ -1.36
CCDC171-201ENST00000380701 CHATP28329 748 aa6.58□□□□□ -1.36
CCDC171-201ENST00000380701 RPS18P62269 152 aaKnown RBP6.58□□□□□ -1.36
CCDC171-201ENST00000380701 RPS27AP62979 156 aaKnown RBP6.58□□□□□ -1.36
CCDC171-201ENST00000380701 UBA52P62987 128 aaKnown RBP6.58□□□□□ -1.36
CCDC171-201ENST00000380701 TLE4Q04727 773 aa6.58□□□□□ -1.36
CCDC171-201ENST00000380701 GK2Q14410 553 aaPredicted RBP6.58□□□□□ -1.36
CCDC171-201ENST00000380701 OTUD1Q5VV17 481 aaPredicted RBP6.58□□□□□ -1.36
CCDC171-201ENST00000380701 ZNF836Q6ZNA1 936 aa6.58□□□□□ -1.36
CCDC171-201ENST00000380701 CFAP77Q6ZQR2 320 aa6.58□□□□□ -1.36
CCDC171-201ENST00000380701 CREB3L2Q70SY1 520 aa6.58□□□□□ -1.36
CCDC171-201ENST00000380701 SYS1Q8N2H4 156 aa6.58□□□□□ -1.36
CCDC171-201ENST00000380701 ZFP41Q8N8Y5 198 aa6.58□□□□□ -1.36
CCDC171-201ENST00000380701 HRASLS5Q96KN8 279 aa6.58□□□□□ -1.36
CCDC171-201ENST00000380701 EGLN2Q96KS0 407 aa6.58□□□□□ -1.36
CCDC171-201ENST00000380701 FOXQ1Q9C009 403 aa6.58□□□□□ -1.36
CCDC171-201ENST00000380701 EMCNQ9ULC0 261 aa6.58□□□□□ -1.36
CCDC171-201ENST00000380701 PCDHGA1Q9Y5H4 931 aa6.58□□□□□ -1.36
CCDC171-201ENST00000380701 ARPC4-TTLL3A0A0A6YYG9 625 aa6.58□□□□□ -1.36
CCDC171-201ENST00000380701 ANKUB1A6NFN9 424 aa6.58□□□□□ -1.36
CCDC171-201ENST00000380701 SH2D7A6NKC9 451 aaPredicted RBP6.58□□□□□ -1.36
CCDC171-201ENST00000380701 ENSAO43768 121 aaKnown RBP6.58□□□□□ -1.36
CCDC171-201ENST00000380701 PPT1P50897 306 aa6.58□□□□□ -1.36
CCDC171-201ENST00000380701 SMIM21Q3B7S5 101 aa6.58□□□□□ -1.36
CCDC171-201ENST00000380701 C18orf63Q68DL7 685 aa6.58□□□□□ -1.36
CCDC171-201ENST00000380701 SFRP4Q6FHJ7 346 aaPredicted RBP6.58□□□□□ -1.36
CCDC171-201ENST00000380701 MARCH3Q86UD3 253 aa6.58□□□□□ -1.36
CCDC171-201ENST00000380701 GCNT2Q8N0V5 402 aa6.58□□□□□ -1.36
CCDC171-201ENST00000380701 EMG1Q92979 244 aaKnown RBP6.58□□□□□ -1.36
CCDC171-201ENST00000380701 SLC35E1Q96K37 410 aa6.58□□□□□ -1.36
CCDC171-201ENST00000380701 ZIC5Q96T25 663 aa6.58□□□□□ -1.36
CCDC171-201ENST00000380701 TMEM202A6NGA9 273 aa6.57□□□□□ -1.36
CCDC171-201ENST00000380701 PRRT4C9JH25 899 aa6.57□□□□□ -1.36
CCDC171-201ENST00000380701 GOSR2O14653 212 aa6.57□□□□□ -1.36
CCDC171-201ENST00000380701 TBXA2RP21731 343 aa6.57□□□□□ -1.36
CCDC171-201ENST00000380701 BLVRBP30043 206 aaPredicted RBP6.57□□□□□ -1.36
CCDC171-201ENST00000380701 SSTR4P31391 388 aa6.57□□□□□ -1.36
CCDC171-201ENST00000380701 CSN1S1P47710 185 aa6.57□□□□□ -1.36
CCDC171-201ENST00000380701 HNRNPFP52597 415 aaKnown RBP6.57□□□□□ -1.36
CCDC171-201ENST00000380701 CLDN6P56747 220 aa6.57□□□□□ -1.36
CCDC171-201ENST00000380701 PCBP4P57723 403 aaKnown RBP6.57□□□□□ -1.36
CCDC171-201ENST00000380701 ACSM1Q08AH1 577 aa6.57□□□□□ -1.36
CCDC171-201ENST00000380701 AGBL4Q5VU57 503 aa6.57□□□□□ -1.36
CCDC171-201ENST00000380701 TMEM236Q5W0B7 351 aa6.57□□□□□ -1.36
CCDC171-201ENST00000380701 LILRA6Q6PI73 481 aa6.57□□□□□ -1.36
CCDC171-201ENST00000380701 PLXDC2Q6UX71 529 aa6.57□□□□□ -1.36
CCDC171-201ENST00000380701 ARIH2OSQ8N7S6 290 aa6.57□□□□□ -1.36
CCDC171-201ENST00000380701 RNF170Q96K19 258 aa6.57□□□□□ -1.36
CCDC171-201ENST00000380701 QRSL1Q9H0R6 528 aaKnown RBP6.57□□□□□ -1.36
CCDC171-201ENST00000380701 HIF1ANQ9NWT6 349 aa6.57□□□□□ -1.36
CCDC171-201ENST00000380701 PLCH1Q4KWH8 1693 aa6.57□□□□□ -1.36
CCDC171-201ENST00000380701 LOC100289279A0A1B0GTE1 492 aa6.57□□□□□ -1.36
CCDC171-201ENST00000380701 PLPP1O14494 284 aa6.57□□□□□ -1.36
CCDC171-201ENST00000380701 CALCBP10092 127 aa6.57□□□□□ -1.36
CCDC171-201ENST00000380701 ZNF14P17017 642 aaPredicted RBP6.57□□□□□ -1.36
CCDC171-201ENST00000380701 GABRG2P18507 467 aa6.57□□□□□ -1.36
CCDC171-201ENST00000380701 CRHBPP24387 322 aa6.57□□□□□ -1.36
CCDC171-201ENST00000380701 C21orf33P30042 268 aaPredicted RBP6.57□□□□□ -1.36
CCDC171-201ENST00000380701 ZXDBP98169 803 aa6.57□□□□□ -1.36
CCDC171-201ENST00000380701 TMEM207Q6UWW9 146 aa6.57□□□□□ -1.36
CCDC171-201ENST00000380701 COX15Q7KZN9 410 aa6.57□□□□□ -1.36
CCDC171-201ENST00000380701 LILRA2Q8N149 483 aa6.57□□□□□ -1.36
CCDC171-201ENST00000380701 LRRC18Q8N456 261 aa6.57□□□□□ -1.36
CCDC171-201ENST00000380701 OR4D9Q8NGE8 314 aa6.57□□□□□ -1.36
CCDC171-201ENST00000380701 ZDHHC16Q969W1 377 aa6.57□□□□□ -1.36
CCDC171-201ENST00000380701 TMIGD2Q96BF3 282 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms