RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 SDC1P18827 310 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 CD1BP29016 333 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 HCCSP53701 268 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 C4orf17Q53FE4 359 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 DPPA2Q7Z7J5 298 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 DTD1Q8TEA8 209 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 KCND3Q9UK17 655 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 PPIHO43447 177 aaKnown RBP11.48□□□□□ -0.57
CHD3-203ENST00000380358 SPINK2P20155 84 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 GPR12P47775 334 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 ZNF816Q0VGE8 651 aaPredicted RBP11.48□□□□□ -0.57
CHD3-203ENST00000380358 C6orf89Q6UWU4 347 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 LRRTM3Q86VH5 581 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 C16orf70Q9BSU1 422 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 SLC46A2Q9BY10 475 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 METTL17Q9H7H0 456 aaPredicted RBP11.48□□□□□ -0.57
CHD3-203ENST00000380358 SPHK1Q9NYA1 384 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 ASB4Q9Y574 426 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 MADDQ8WXG6 1647 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 MEIKINA0A087WXM9 373 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 KIR2DS5A0A0G2JLQ3 304 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 A0A0G2JNG1 304 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 METTL15A6NJ78 407 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 KIR2DS3K7RE56 304 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 AIFM1O95831 613 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 SUB1P53999 127 aaKnown RBP eCLIP11.48□□□□□ -0.57
CHD3-203ENST00000380358 KIR2DS5Q14953 304 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 RPE65Q16518 533 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 C6orf15Q6UXA7 325 aaPredicted RBP11.48□□□□□ -0.57
CHD3-203ENST00000380358 DOK3Q7L591 496 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 EMC7Q9NPA0 242 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 PPT2Q9UMR5 302 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 DNAJC15Q9Y5T4 150 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 NAP1L6A6NFF2 107 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 NME2P1O60361 137 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 NFYAP23511 347 aaPredicted RBP11.48□□□□□ -0.57
CHD3-203ENST00000380358 ITGB7P26010 798 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 GIPRP48546 466 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 CPZQ66K79 652 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 SPNS3Q6ZMD2 512 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 DCXRQ7Z4W1 244 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 ZNF436Q9C0F3 470 aaPredicted RBP11.48□□□□□ -0.57
CHD3-203ENST00000380358 SLC2A9Q9NRM0 540 aa11.48□□□□□ -0.57
CHD3-203ENST00000380358 SSSCA1O60232 199 aa11.47□□□□□ -0.57
CHD3-203ENST00000380358 GALR3O60755 368 aaPredicted RBP11.47□□□□□ -0.57
CHD3-203ENST00000380358 OPRL1P41146 370 aa11.47□□□□□ -0.57
CHD3-203ENST00000380358 SLC35F3Q8IY50 421 aa11.47□□□□□ -0.57
CHD3-203ENST00000380358 KDF1Q8NAX2 398 aaPredicted RBP11.47□□□□□ -0.57
CHD3-203ENST00000380358 APH1BQ8WW43 257 aa11.47□□□□□ -0.57
CHD3-203ENST00000380358 TMEM40Q8WWA1 233 aa11.47□□□□□ -0.57
CHD3-203ENST00000380358 RDH5Q92781 318 aa11.47□□□□□ -0.57
CHD3-203ENST00000380358 C1QTNF2Q9BXJ5 285 aa11.47□□□□□ -0.57
CHD3-203ENST00000380358 DNMT3BQ9UBC3 853 aaKnown RBP11.47□□□□□ -0.57
CHD3-203ENST00000380358 SELENOFO60613 162 aa11.47□□□□□ -0.57
CHD3-203ENST00000380358 SIX6O95475 246 aa11.47□□□□□ -0.57
CHD3-203ENST00000380358 ATP4BP51164 291 aa11.47□□□□□ -0.57
CHD3-203ENST00000380358 SLC35A1P78382 337 aa11.47□□□□□ -0.57
CHD3-203ENST00000380358 DEFA6Q01524 100 aa11.47□□□□□ -0.57
CHD3-203ENST00000380358 TMEM123Q8N131 208 aa11.47□□□□□ -0.57
CHD3-203ENST00000380358 ISL2Q96A47 359 aa11.47□□□□□ -0.57
CHD3-203ENST00000380358 SPINK4O60575 86 aa11.47□□□□□ -0.57
CHD3-203ENST00000380358 FZD7O75084 574 aa11.47□□□□□ -0.57
CHD3-203ENST00000380358 GK3PQ14409 553 aa11.47□□□□□ -0.57
CHD3-203ENST00000380358 ZNF425Q6IV72 752 aa11.47□□□□□ -0.57
CHD3-203ENST00000380358 HIST2H3AQ71DI3 136 aa11.47□□□□□ -0.57
CHD3-203ENST00000380358 CCDC74AQ96AQ1 378 aa11.47□□□□□ -0.57
CHD3-203ENST00000380358 TMIGD2Q96BF3 282 aa11.47□□□□□ -0.57
CHD3-203ENST00000380358 MISP3Q96FF7 219 aa11.47□□□□□ -0.57
CHD3-203ENST00000380358 GORASP2Q9H8Y8 452 aa11.47□□□□□ -0.57
CHD3-203ENST00000380358 C12orf10Q9HB07 376 aa11.47□□□□□ -0.57
CHD3-203ENST00000380358 FGF21Q9NSA1 209 aa11.47□□□□□ -0.57
CHD3-203ENST00000380358 HCFC2Q9Y5Z7 792 aa11.47□□□□□ -0.57
CHD3-203ENST00000380358 BMPR1BO00238 502 aa11.47□□□□□ -0.57
CHD3-203ENST00000380358 ADH4P08319 380 aa11.47□□□□□ -0.57
CHD3-203ENST00000380358 FDXRP22570 491 aa11.47□□□□□ -0.57
CHD3-203ENST00000380358 WFDC3Q8IUB2 231 aa11.47□□□□□ -0.57
CHD3-203ENST00000380358 DTWD2Q8NBA8 298 aa11.47□□□□□ -0.57
CHD3-203ENST00000380358 SOX7Q9BT81 388 aa11.47□□□□□ -0.57
CHD3-203ENST00000380358 SPACA1Q9HBV2 294 aa11.47□□□□□ -0.57
CHD3-203ENST00000380358 ARHGAP23Q9P227 1491 aa11.47□□□□□ -0.57
CHD3-203ENST00000380358 LOC102723971A0A1B0GUV8 181 aa11.47□□□□□ -0.57
CHD3-203ENST00000380358 CSF3P09919 207 aa11.47□□□□□ -0.57
CHD3-203ENST00000380358 Q7L0L9 218 aa11.47□□□□□ -0.57
CHD3-203ENST00000380358 PRSS45Q7RTY3 260 aa11.47□□□□□ -0.57
CHD3-203ENST00000380358 ZC3H3Q8IXZ2 948 aaKnown RBP11.47□□□□□ -0.57
CHD3-203ENST00000380358 ENTPD2Q9Y5L3 495 aa11.47□□□□□ -0.57
CHD3-203ENST00000380358 TMEM82A0PJX8 343 aa11.47□□□□□ -0.57
CHD3-203ENST00000380358 GLCEO94923 617 aa11.47□□□□□ -0.57
CHD3-203ENST00000380358 MAMSTRQ6ZN01 415 aa11.47□□□□□ -0.57
CHD3-203ENST00000380358 RFLNAQ6ZTI6 216 aa11.47□□□□□ -0.57
CHD3-203ENST00000380358 OR5M8Q8NGP6 311 aa11.47□□□□□ -0.57
CHD3-203ENST00000380358 OR13J1Q8NGT2 312 aa11.47□□□□□ -0.57
CHD3-203ENST00000380358 SMAP2Q8WU79 429 aaPredicted RBP11.47□□□□□ -0.57
CHD3-203ENST00000380358 MENTQ9BUN1 341 aa11.47□□□□□ -0.57
CHD3-203ENST00000380358 SLC12A9Q9BXP2 914 aa11.47□□□□□ -0.57
CHD3-203ENST00000380358 POFUT1Q9H488 388 aa11.47□□□□□ -0.57
CHD3-203ENST00000380358 WSB2Q9NYS7 404 aaPredicted RBP11.47□□□□□ -0.57
CHD3-203ENST00000380358 WDR1O75083 606 aa11.46□□□□□ -0.57
CHD3-203ENST00000380358 SNAPINO95295 136 aa11.46□□□□□ -0.57
CHD3-203ENST00000380358 KCTD11Q693B1 232 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms