RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 CLDN20P56880 219 aa7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 CCL7P80098 99 aa7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 DGCR2P98153 550 aa7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 CBFBQ13951 182 aa7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 ETFDHQ16134 617 aa7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 ODF4Q2M2E3 257 aa7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 SLC36A2Q495M3 483 aa7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 EMC4Q5J8M3 183 aa7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 EEF1A1P5Q5VTE0 462 aa7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 FAM69BQ5VUD6 431 aa7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 KRT74Q7RTS7 529 aa7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 OVCH1Q7RTY7 1134 aa7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 ZNF433Q8N7K0 673 aaPredicted RBP7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 NFAM1Q8NET5 270 aaPredicted RBP7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 OR10AC1Q8NH08 325 aa7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 LGALS14Q8TCE9 139 aa7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 ATOH1Q92858 354 aaPredicted RBP7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 NKD1Q969G9 470 aa7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 ZFP3Q96NJ6 502 aa7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 MARVELD1Q9BSK0 173 aa7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 GALNT9Q9HCQ5 603 aa7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 TNRC6BQ9UPQ9 1833 aaKnown RBP7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 MED12Q93074 2177 aa7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 KIF26BQ2KJY2 2108 aa7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 OR6C76A6NM76 312 aa7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 TNFRSF10AO00220 468 aa7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 GPRIN2O60269 458 aa7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 SLC43A1O75387 559 aa7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 SLC25A12O75746 678 aa7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 LCN1P31025 176 aa7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 SOX2P48431 317 aa7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 ACKR1Q16570 336 aa7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 COL28A1Q2UY09 1125 aa7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 ZFP69Q49AA0 526 aa7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 METTL11BQ5VVY1 283 aa7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 BICRALQ6AI39 1079 aa7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 LCN10Q6JVE6 187 aa7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 NUP54Q7Z3B4 507 aa7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 ANKRD37Q7Z713 158 aa7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 OR2T4Q8NH00 348 aa7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 THEM6Q8WUY1 208 aa7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 PMEPA1Q969W9 287 aa7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 GFM1Q96RP9 751 aaKnown RBP7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 CDX2Q99626 313 aaPredicted RBP7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 ABCG5Q9H222 651 aa7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 AKIRIN1Q9H9L7 192 aaPredicted RBP7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 APMAPQ9HDC9 416 aa7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 KCNG2Q9UJ96 466 aa7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 LAMP5Q9UJQ1 280 aa7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 IKZF2Q9UKS7 526 aa7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 GTF2A1LQ9UNN4 478 aa7.19□□□□□ -1.26
PDLIM5-204ENST00000380176 TMEM200CA6NKL6 621 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 SIGLEC6O43699 453 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 RENP00797 406 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 HLA-DOBP13765 273 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 ALOX5APP20292 161 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 EPHA8P29322 1005 aaPredicted RBP7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 SLC6A1P30531 599 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 POLR2HP52434 150 aaKnown RBP7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 ALKBH1Q13686 389 aaKnown RBP7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 NKAIN1Q4KMZ8 207 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 FAM69AQ5T7M9 428 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 C1orf140Q5VVS0 124 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 PYHIN1Q6K0P9 492 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 CORO6Q6QEF8 472 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 SLC35D2Q76EJ3 337 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 MAMDC2Q7Z304 686 aaPredicted RBP7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 WDFY1Q8IWB7 410 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 OR51A4Q8NGJ6 313 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 HAVCR2Q8TDQ0 301 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 GCDHQ92947 438 aaPredicted RBP7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 YIPF5Q969M3 257 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 ULBP3Q9BZM4 244 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 SEMA4CQ9C0C4 833 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 SYNDIG1Q9H7V2 258 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 PLSCR3Q9NRY6 295 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 SLCO1C1Q9NYB5 712 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 TAS2R10Q9NYW0 307 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 ABRACLQ9P1F3 81 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 PCDHGA9Q9Y5G4 932 aaKnown RBP7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 IGLV3-12A0A075B6K2 115 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 IGHV5-10-1A0A0J9YXX1 117 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 OR6C70A6NIJ9 312 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 HEXBP07686 556 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 GSTT2P0CG29 244 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 GSTT2BP0CG30 244 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 ADRA2CP18825 462 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 HLA-DMAP28067 261 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 PSMA6P60900 246 aaKnown RBP7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 INSM1Q01101 510 aaPredicted RBP7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 MELKQ14680 651 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 SGCBQ16585 318 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 PLA1AQ53H76 456 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 YIF1BQ5BJH7 314 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 LYSMD4Q5XG99 296 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 SLC6A19Q695T7 634 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 GPR139Q6DWJ6 353 aa7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 FAM199XQ6PEV8 388 aaPredicted RBP7.18□□□□□ -1.26
PDLIM5-204ENST00000380176 SERPINA12Q8IW75 414 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms