RNA–Protein interactions for RNA: ENST00000380097.7

TRIM6-202, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 3,403 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-202ENST00000380097 MAKP20794 623 aa6.66□□□□□ -1.34
TRIM6-202ENST00000380097 AGAP20933 346 aa6.66□□□□□ -1.34
TRIM6-202ENST00000380097 RPL4P36578 427 aaKnown RBP6.66□□□□□ -1.34
TRIM6-202ENST00000380097 RBP2P50120 134 aa6.66□□□□□ -1.34
TRIM6-202ENST00000380097 CAV2P51636 162 aa6.66□□□□□ -1.34
TRIM6-202ENST00000380097 NDUFA6P56556 154 aa6.66□□□□□ -1.34
TRIM6-202ENST00000380097 SPCS3P61009 180 aa6.66□□□□□ -1.34
TRIM6-202ENST00000380097 EIF5AP63241 154 aaKnown RBP6.66□□□□□ -1.34
TRIM6-202ENST00000380097 NKPD1Q17RQ9 610 aa6.66□□□□□ -1.34
TRIM6-202ENST00000380097 FAM46CQ5VWP2 391 aa6.66□□□□□ -1.34
TRIM6-202ENST00000380097 MRM1Q6IN84 353 aaKnown RBP6.66□□□□□ -1.34
TRIM6-202ENST00000380097 THSD4Q6ZMP0 1018 aa6.66□□□□□ -1.34
TRIM6-202ENST00000380097 DBX2Q6ZNG2 339 aa6.66□□□□□ -1.34
TRIM6-202ENST00000380097 GALNT16Q8N428 558 aa6.66□□□□□ -1.34
TRIM6-202ENST00000380097 ZNF615Q8N8J6 731 aa6.66□□□□□ -1.34
TRIM6-202ENST00000380097 RASGEF1AQ8N9B8 481 aa6.66□□□□□ -1.34
TRIM6-202ENST00000380097 NUP43Q8NFH3 380 aa6.66□□□□□ -1.34
TRIM6-202ENST00000380097 OR5T3Q8NGG3 340 aa6.66□□□□□ -1.34
TRIM6-202ENST00000380097 CPNE4Q96A23 557 aaPredicted RBP6.66□□□□□ -1.34
TRIM6-202ENST00000380097 OCSTAMPQ9BR26 566 aa6.66□□□□□ -1.34
TRIM6-202ENST00000380097 WDR45Q9Y484 360 aa6.66□□□□□ -1.34
TRIM6-202ENST00000380097 CSAG2Q9Y5P2 127 aa6.66□□□□□ -1.34
TRIM6-202ENST00000380097 WIF1Q9Y5W5 379 aa6.66□□□□□ -1.34
TRIM6-202ENST00000380097 PIAS3Q9Y6X2 628 aa6.66□□□□□ -1.34
TRIM6-202ENST00000380097 SCN10AQ9Y5Y9 1956 aa6.66□□□□□ -1.34
TRIM6-202ENST00000380097 SZT2Q5T011 3432 aa6.66□□□□□ -1.34
TRIM6-202ENST00000380097 LOC390937A0A1W2PQ73 354 aa6.66□□□□□ -1.34
TRIM6-202ENST00000380097 NPIPB9F8W1W9 429 aa6.66□□□□□ -1.34
TRIM6-202ENST00000380097 EIF1AYO14602 144 aaKnown RBP6.66□□□□□ -1.34
TRIM6-202ENST00000380097 NDUFS4O43181 175 aa6.66□□□□□ -1.34
TRIM6-202ENST00000380097 YIF1AO95070 293 aa6.66□□□□□ -1.34
TRIM6-202ENST00000380097 IFNA2P01563 188 aa6.66□□□□□ -1.34
TRIM6-202ENST00000380097 SERPINA5P05154 406 aa6.66□□□□□ -1.34
TRIM6-202ENST00000380097 CTSLP07711 333 aa6.66□□□□□ -1.34
TRIM6-202ENST00000380097 DAOP14920 347 aa6.66□□□□□ -1.34
TRIM6-202ENST00000380097 AK4P27144 223 aaPredicted RBP6.66□□□□□ -1.34
TRIM6-202ENST00000380097 BSGP35613 385 aa6.66□□□□□ -1.34
TRIM6-202ENST00000380097 RPS10P46783 165 aaKnown RBP6.66□□□□□ -1.34
TRIM6-202ENST00000380097 EIF1AXP47813 144 aaKnown RBP6.66□□□□□ -1.34
TRIM6-202ENST00000380097 TAS2R60P59551 318 aa6.66□□□□□ -1.34
TRIM6-202ENST00000380097 RPS11P62280 158 aaKnown RBP eCLIP6.66□□□□□ -1.34
TRIM6-202ENST00000380097 HTRA4P83105 476 aaPredicted RBP6.66□□□□□ -1.34
TRIM6-202ENST00000380097 ODF4Q2M2E3 257 aa6.66□□□□□ -1.34
TRIM6-202ENST00000380097 ANKRD39Q53RE8 183 aa6.66□□□□□ -1.34
TRIM6-202ENST00000380097 ARHGAP40Q5TG30 622 aa6.66□□□□□ -1.34
TRIM6-202ENST00000380097 PAPD4Q6PIY7 484 aaKnown RBP6.66□□□□□ -1.34
TRIM6-202ENST00000380097 BPIFB2Q8N4F0 458 aa6.66□□□□□ -1.34
TRIM6-202ENST00000380097 CD300LFQ8TDQ1 290 aa6.66□□□□□ -1.34
TRIM6-202ENST00000380097 MRPL38Q96DV4 380 aaKnown RBP6.66□□□□□ -1.34
TRIM6-202ENST00000380097 WDR34Q96EX3 536 aa6.66□□□□□ -1.34
TRIM6-202ENST00000380097 NECAB3Q96P71 396 aaPredicted RBP6.66□□□□□ -1.34
TRIM6-202ENST00000380097 SEMA6CQ9H3T2 930 aa6.66□□□□□ -1.34
TRIM6-202ENST00000380097 IGFLR1Q9H665 355 aa6.66□□□□□ -1.34
TRIM6-202ENST00000380097 C20orf141Q9NUB4 165 aa6.66□□□□□ -1.34
TRIM6-202ENST00000380097 MARCH5Q9NX47 278 aa6.66□□□□□ -1.34
TRIM6-202ENST00000380097 LPAR3Q9UBY5 353 aa6.66□□□□□ -1.34
TRIM6-202ENST00000380097 URB1O60287 2271 aaKnown RBP6.66□□□□□ -1.34
TRIM6-202ENST00000380097 SLC5A10A0PJK1 596 aa6.65□□□□□ -1.34
TRIM6-202ENST00000380097 BTBD17A6NE02 478 aa6.65□□□□□ -1.34
TRIM6-202ENST00000380097 ZNF736B4DX44 427 aaPredicted RBP6.65□□□□□ -1.34
TRIM6-202ENST00000380097 KLF4O43474 513 aa6.65□□□□□ -1.34
TRIM6-202ENST00000380097 CDC40O60508 579 aaKnown RBP eCLIP6.65□□□□□ -1.34
TRIM6-202ENST00000380097 TMEM127O75204 238 aa6.65□□□□□ -1.34
TRIM6-202ENST00000380097 CD79AP11912 226 aa6.65□□□□□ -1.34
TRIM6-202ENST00000380097 ITGA3P26006 1051 aa6.65□□□□□ -1.34
TRIM6-202ENST00000380097 PSMB6P28072 239 aa6.65□□□□□ -1.34
TRIM6-202ENST00000380097 SLC6A6P31641 620 aa6.65□□□□□ -1.34
TRIM6-202ENST00000380097 CLDN2P57739 230 aa6.65□□□□□ -1.34
TRIM6-202ENST00000380097 FUT5Q11128 374 aa6.65□□□□□ -1.34
TRIM6-202ENST00000380097 GAS6Q14393 721 aa6.65□□□□□ -1.34
TRIM6-202ENST00000380097 SLC9A5Q14940 896 aa6.65□□□□□ -1.34
TRIM6-202ENST00000380097 ZNF750Q32MQ0 723 aa6.65□□□□□ -1.34
TRIM6-202ENST00000380097 ARHGAP11AQ6P4F7 1023 aa6.65□□□□□ -1.34
TRIM6-202ENST00000380097 FAM111BQ6SJ93 734 aa6.65□□□□□ -1.34
TRIM6-202ENST00000380097 SLC35F3Q8IY50 421 aa6.65□□□□□ -1.34
TRIM6-202ENST00000380097 ZNF676Q8N7Q3 588 aa6.65□□□□□ -1.34
TRIM6-202ENST00000380097 OR4K14Q8NGD5 310 aa6.65□□□□□ -1.34
TRIM6-202ENST00000380097 OR5AK2Q8NH90 309 aa6.65□□□□□ -1.34
TRIM6-202ENST00000380097 NUDCD2Q8WVJ2 157 aa6.65□□□□□ -1.34
TRIM6-202ENST00000380097 GAL3ST3Q96A11 431 aa6.65□□□□□ -1.34
TRIM6-202ENST00000380097 C14orf144Q96I85 54 aa6.65□□□□□ -1.34
TRIM6-202ENST00000380097 KIRREL1Q96J84 757 aa6.65□□□□□ -1.34
TRIM6-202ENST00000380097 ZNF558Q96NG5 402 aa6.65□□□□□ -1.34
TRIM6-202ENST00000380097 PRAP1Q96NZ9 151 aa6.65□□□□□ -1.34
TRIM6-202ENST00000380097 SGPP1Q9BX95 441 aa6.65□□□□□ -1.34
TRIM6-202ENST00000380097 USP36Q9P275 1121 aaKnown RBP6.65□□□□□ -1.34
TRIM6-202ENST00000380097 IKZF2Q9UKS7 526 aa6.65□□□□□ -1.34
TRIM6-202ENST00000380097 DOCK6Q96HP0 2047 aa6.65□□□□□ -1.34
TRIM6-202ENST00000380097 TBC1D3EA0A087X179 549 aa6.65□□□□□ -1.35
TRIM6-202ENST00000380097 C7orf77A4D0Y5 90 aa6.65□□□□□ -1.35
TRIM6-202ENST00000380097 IDSB3KWA1 339 aa6.65□□□□□ -1.35
TRIM6-202ENST00000380097 KIAA0355O15063 1070 aa6.65□□□□□ -1.35
TRIM6-202ENST00000380097 EMC8O43402 210 aa6.65□□□□□ -1.35
TRIM6-202ENST00000380097 VEGFDO43915 354 aa6.65□□□□□ -1.35
TRIM6-202ENST00000380097 TBX19O60806 448 aa6.65□□□□□ -1.35
TRIM6-202ENST00000380097 ZFPL1O95159 310 aa6.65□□□□□ -1.35
TRIM6-202ENST00000380097 STATHP02808 62 aa6.65□□□□□ -1.35
TRIM6-202ENST00000380097 TACSTD2P09758 323 aa6.65□□□□□ -1.35
TRIM6-202ENST00000380097 FBXO45P0C2W1 286 aa6.65□□□□□ -1.35
TRIM6-202ENST00000380097 CSNK2A2P19784 350 aaPredicted RBP6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms