RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 PAX1P15863 534 aa12.11□□□□□ -0.47
PRPF18-202ENST00000378572 PTNP21246 168 aa12.11□□□□□ -0.47
PRPF18-202ENST00000378572 GGT2P36268 569 aa12.11□□□□□ -0.47
PRPF18-202ENST00000378572 CLK1P49759 484 aaKnown RBP12.11□□□□□ -0.47
PRPF18-202ENST00000378572 RASGEF1BQ0VAM2 473 aa12.11□□□□□ -0.47
PRPF18-202ENST00000378572 ITGADQ13349 1161 aa12.11□□□□□ -0.47
PRPF18-202ENST00000378572 P2RY6Q15077 328 aa12.11□□□□□ -0.47
PRPF18-202ENST00000378572 ZNF74Q16587 644 aa12.11□□□□□ -0.47
PRPF18-202ENST00000378572 NCMAPQ5T1S8 102 aa12.11□□□□□ -0.47
PRPF18-202ENST00000378572 C8orf59Q8N0T1 100 aaPredicted RBP12.11□□□□□ -0.47
PRPF18-202ENST00000378572 UBE2J2Q8N2K1 259 aa12.11□□□□□ -0.47
PRPF18-202ENST00000378572 TEX47Q8TBZ9 253 aa12.11□□□□□ -0.47
PRPF18-202ENST00000378572 MUCL1Q96DR8 90 aa12.11□□□□□ -0.47
PRPF18-202ENST00000378572 CNBD2Q96M20 576 aa12.11□□□□□ -0.47
PRPF18-202ENST00000378572 APOL4Q9BPW4 351 aa12.11□□□□□ -0.47
PRPF18-202ENST00000378572 FKRPQ9H9S5 495 aa12.11□□□□□ -0.47
PRPF18-202ENST00000378572 GP6Q9HCN6 339 aa12.11□□□□□ -0.47
PRPF18-202ENST00000378572 PRSS50Q9UI38 385 aa12.11□□□□□ -0.47
PRPF18-202ENST00000378572 CSPG4Q6UVK1 2322 aa12.1□□□□□ -0.47
PRPF18-202ENST00000378572 H3BN98 237 aa12.1□□□□□ -0.47
PRPF18-202ENST00000378572 OR2T1O43869 369 aa12.1□□□□□ -0.47
PRPF18-202ENST00000378572 PTP4A3O75365 173 aa12.1□□□□□ -0.47
PRPF18-202ENST00000378572 SOD3P08294 240 aa12.1□□□□□ -0.47
PRPF18-202ENST00000378572 FUT1P19526 365 aa12.1□□□□□ -0.47
PRPF18-202ENST00000378572 IDUAP35475 653 aa12.1□□□□□ -0.47
PRPF18-202ENST00000378572 CDH11P55287 796 aa12.1□□□□□ -0.47
PRPF18-202ENST00000378572 RAC3P60763 192 aa12.1□□□□□ -0.47
PRPF18-202ENST00000378572 CDK5Q00535 292 aa12.1□□□□□ -0.47
PRPF18-202ENST00000378572 PDK3Q15120 406 aa12.1□□□□□ -0.47
PRPF18-202ENST00000378572 PPA1Q15181 289 aa12.1□□□□□ -0.47
PRPF18-202ENST00000378572 ZNF672Q499Z4 452 aaPredicted RBP12.1□□□□□ -0.47
PRPF18-202ENST00000378572 FAM69AQ5T7M9 428 aa12.1□□□□□ -0.47
PRPF18-202ENST00000378572 C1orf140Q5VVS0 124 aa12.1□□□□□ -0.47
PRPF18-202ENST00000378572 SLX4IPQ5VYV7 408 aa12.1□□□□□ -0.47
PRPF18-202ENST00000378572 THAP5Q7Z6K1 395 aa12.1□□□□□ -0.47
PRPF18-202ENST00000378572 MEX3DQ86XN8 651 aaKnown RBP12.1□□□□□ -0.47
PRPF18-202ENST00000378572 IGFBPL1Q8WX77 278 aa12.1□□□□□ -0.47
PRPF18-202ENST00000378572 DDIT4LQ96D03 193 aa12.1□□□□□ -0.47
PRPF18-202ENST00000378572 ZNF570Q96NI8 536 aa12.1□□□□□ -0.47
PRPF18-202ENST00000378572 MUS81Q96NY9 551 aa12.1□□□□□ -0.47
PRPF18-202ENST00000378572 NR1H4Q96RI1 486 aaPredicted RBP12.1□□□□□ -0.47
PRPF18-202ENST00000378572 ZNF229Q9UJW7 825 aa12.1□□□□□ -0.47
PRPF18-202ENST00000378572 ZANQ9Y493 2812 aa12.1□□□□□ -0.47
PRPF18-202ENST00000378572 SOX14O95416 240 aa12.09□□□□□ -0.47
PRPF18-202ENST00000378572 AHSA1O95433 338 aa12.09□□□□□ -0.47
PRPF18-202ENST00000378572 CLIC3O95833 236 aa12.09□□□□□ -0.47
PRPF18-202ENST00000378572 CH25HO95992 272 aa12.09□□□□□ -0.47
PRPF18-202ENST00000378572 BGLAPP02818 100 aa12.09□□□□□ -0.47
PRPF18-202ENST00000378572 TSPAN19P0C672 248 aa12.09□□□□□ -0.47
PRPF18-202ENST00000378572 ASAH2BP0C7U1 165 aa12.09□□□□□ -0.47
PRPF18-202ENST00000378572 OR3A2P47893 321 aa12.09□□□□□ -0.47
PRPF18-202ENST00000378572 GIPRP48546 466 aa12.09□□□□□ -0.47
PRPF18-202ENST00000378572 ISL1P61371 349 aa12.09□□□□□ -0.47
PRPF18-202ENST00000378572 MFSD13AQ14CX5 517 aa12.09□□□□□ -0.47
PRPF18-202ENST00000378572 ETFDHQ16134 617 aa12.09□□□□□ -0.47
PRPF18-202ENST00000378572 ZBED5Q49AG3 693 aa12.09□□□□□ -0.47
PRPF18-202ENST00000378572 KRT80Q6KB66 452 aa12.09□□□□□ -0.47
PRPF18-202ENST00000378572 Q6ZT83 130 aa12.09□□□□□ -0.47
PRPF18-202ENST00000378572 OAFQ86UD1 273 aa12.09□□□□□ -0.47
PRPF18-202ENST00000378572 DEPDC4Q8N2C3 294 aa12.09□□□□□ -0.47
PRPF18-202ENST00000378572 OR13C2Q8NGS9 318 aa12.09□□□□□ -0.47
PRPF18-202ENST00000378572 FBLIM1Q8WUP2 373 aa12.09□□□□□ -0.47
PRPF18-202ENST00000378572 KTI12Q96EK9 354 aaPredicted RBP12.09□□□□□ -0.47
PRPF18-202ENST00000378572 DNAJA3Q96EY1 480 aa12.09□□□□□ -0.47
PRPF18-202ENST00000378572 USB1Q9BQ65 265 aaKnown RBP12.09□□□□□ -0.47
PRPF18-202ENST00000378572 PTDSS2Q9BVG9 487 aa12.09□□□□□ -0.47
PRPF18-202ENST00000378572 OR52D1Q9H346 318 aa12.09□□□□□ -0.47
PRPF18-202ENST00000378572 EGLN3Q9H6Z9 239 aa12.09□□□□□ -0.47
PRPF18-202ENST00000378572 NANSQ9NR45 359 aa12.09□□□□□ -0.47
PRPF18-202ENST00000378572 FAIMQ9NVQ4 179 aa12.09□□□□□ -0.47
PRPF18-202ENST00000378572 UBAP1Q9NZ09 502 aa12.09□□□□□ -0.47
PRPF18-202ENST00000378572 POU2F3Q9UKI9 436 aa12.09□□□□□ -0.47
PRPF18-202ENST00000378572 ZC3H12DA2A288 527 aaKnown RBP12.08□□□□□ -0.47
PRPF18-202ENST00000378572 ZNF814B7Z6K7 855 aa12.08□□□□□ -0.47
PRPF18-202ENST00000378572 SULT2B1O00204 365 aa12.08□□□□□ -0.47
PRPF18-202ENST00000378572 SMAD9O15198 467 aaKnown RBP12.08□□□□□ -0.47
PRPF18-202ENST00000378572 IGHV3-9P01782 118 aa12.08□□□□□ -0.47
PRPF18-202ENST00000378572 CCNA2P20248 432 aa12.08□□□□□ -0.47
PRPF18-202ENST00000378572 ACVR1BP36896 505 aa12.08□□□□□ -0.47
PRPF18-202ENST00000378572 FXYD6P3P58550 94 aa12.08□□□□□ -0.47
PRPF18-202ENST00000378572 CDC42P60953 191 aa12.08□□□□□ -0.47
PRPF18-202ENST00000378572 CSNK2A1P68400 391 aaPredicted RBP12.08□□□□□ -0.47
PRPF18-202ENST00000378572 FHL1Q13642 323 aa12.08□□□□□ -0.47
PRPF18-202ENST00000378572 SYT14P1Q58G82 188 aa12.08□□□□□ -0.47
PRPF18-202ENST00000378572 C12orf73Q69YU5 71 aa12.08□□□□□ -0.47
PRPF18-202ENST00000378572 SLC27A4Q6P1M0 643 aa12.08□□□□□ -0.47
PRPF18-202ENST00000378572 SMARCD3Q6STE5 483 aa12.08□□□□□ -0.47
PRPF18-202ENST00000378572 OR52L1Q8NGH7 329 aa12.08□□□□□ -0.47
PRPF18-202ENST00000378572 OR8D4Q8NGM9 314 aa12.08□□□□□ -0.47
PRPF18-202ENST00000378572 LILRB1Q8NHL6 650 aaPredicted RBP12.08□□□□□ -0.47
PRPF18-202ENST00000378572 MFSD8Q8NHS3 518 aa12.08□□□□□ -0.47
PRPF18-202ENST00000378572 FANK1Q8TC84 345 aa12.08□□□□□ -0.47
PRPF18-202ENST00000378572 TAAR8Q969N4 342 aa12.08□□□□□ -0.47
PRPF18-202ENST00000378572 ZHX1-C8orf76Q96EF9 292 aa12.08□□□□□ -0.47
PRPF18-202ENST00000378572 MDFIQ99750 246 aa12.08□□□□□ -0.47
PRPF18-202ENST00000378572 PRRG3Q9BZD7 231 aa12.08□□□□□ -0.47
PRPF18-202ENST00000378572 PLA2G12AQ9BZM1 189 aa12.08□□□□□ -0.47
PRPF18-202ENST00000378572 BCO1Q9HAY6 547 aa12.08□□□□□ -0.47
PRPF18-202ENST00000378572 TBC1D23Q9NUY8 699 aa12.08□□□□□ -0.47
PRPF18-202ENST00000378572 EMC3Q9P0I2 261 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms