RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 APEX1P27695 318 aaKnown RBP18.12■□□□□ 0.49
VSX1-201ENST00000376707 THBS2P35442 1172 aa18.12■□□□□ 0.49
VSX1-201ENST00000376707 RAB39AQ14964 217 aa18.12■□□□□ 0.49
VSX1-201ENST00000376707 MSMPQ1L6U9 139 aa18.12■□□□□ 0.49
VSX1-201ENST00000376707 NANOGNBQ7Z5D8 188 aa18.12■□□□□ 0.49
VSX1-201ENST00000376707 SKA3Q8IX90 412 aa18.12■□□□□ 0.49
VSX1-201ENST00000376707 SLC22A24Q8N4F4 322 aa18.12■□□□□ 0.49
VSX1-201ENST00000376707 LRRC17Q8N6Y2 441 aa18.12■□□□□ 0.49
VSX1-201ENST00000376707 PCYOX1LQ8NBM8 494 aa18.12■□□□□ 0.49
VSX1-201ENST00000376707 SLC25A44Q96H78 314 aaPredicted RBP18.12■□□□□ 0.49
VSX1-201ENST00000376707 SNX18Q96RF0 628 aa18.12■□□□□ 0.49
VSX1-201ENST00000376707 SYT3Q9BQG1 590 aa18.12■□□□□ 0.49
VSX1-201ENST00000376707 PRSS27Q9BQR3 290 aa18.12■□□□□ 0.49
VSX1-201ENST00000376707 SOX7Q9BT81 388 aa18.12■□□□□ 0.49
VSX1-201ENST00000376707 MS4A5Q9H3V2 200 aa18.12■□□□□ 0.49
VSX1-201ENST00000376707 BAG5Q9UL15 447 aa18.12■□□□□ 0.49
VSX1-201ENST00000376707 LILRA1O75019 489 aa18.11■□□□□ 0.49
VSX1-201ENST00000376707 FARS2O95363 451 aaKnown RBP18.11■□□□□ 0.49
VSX1-201ENST00000376707 ASAH2BP0C7U1 165 aa18.11■□□□□ 0.49
VSX1-201ENST00000376707 PATE4P0C8F1 98 aa18.11■□□□□ 0.49
VSX1-201ENST00000376707 OR8G3PP0DMU2 310 aa18.11■□□□□ 0.49
VSX1-201ENST00000376707 CARM1Q86X55 608 aa18.11■□□□□ 0.49
VSX1-201ENST00000376707 C10orf82Q8WW14 230 aa18.11■□□□□ 0.49
VSX1-201ENST00000376707 HPS1Q92902 700 aa18.11■□□□□ 0.49
VSX1-201ENST00000376707 POLR2J2Q9GZM3 115 aaKnown RBP18.11■□□□□ 0.49
VSX1-201ENST00000376707 POLR2J3Q9H1A7 115 aaKnown RBP18.11■□□□□ 0.49
VSX1-201ENST00000376707 GID8Q9NWU2 228 aa18.11■□□□□ 0.49
VSX1-201ENST00000376707 SH3GLB1Q9Y371 365 aa18.11■□□□□ 0.49
VSX1-201ENST00000376707 LOC100653049A0A140TA62 436 aa18.1■□□□□ 0.49
VSX1-201ENST00000376707 LYNX1G3V0Z9 82 aa18.1■□□□□ 0.49
VSX1-201ENST00000376707 DHHO43323 396 aa18.1■□□□□ 0.49
VSX1-201ENST00000376707 KRT34O76011 436 aa18.1■□□□□ 0.49
VSX1-201ENST00000376707 BCL10O95999 233 aa18.1■□□□□ 0.49
VSX1-201ENST00000376707 IFNA14P01570 189 aa18.1■□□□□ 0.49
VSX1-201ENST00000376707 SERPINA5P05154 406 aa18.1■□□□□ 0.49
VSX1-201ENST00000376707 LYNX1P0DP58 116 aa18.1■□□□□ 0.49
VSX1-201ENST00000376707 IL2RGP31785 369 aa18.1■□□□□ 0.49
VSX1-201ENST00000376707 ALDH3B1P43353 468 aa18.1■□□□□ 0.49
VSX1-201ENST00000376707 SF3A3Q12874 501 aaKnown RBP eCLIP18.1■□□□□ 0.49
VSX1-201ENST00000376707 RIN1Q13671 783 aa18.1■□□□□ 0.49
VSX1-201ENST00000376707 FXNQ16595 210 aa18.1■□□□□ 0.49
VSX1-201ENST00000376707 CR1LQ2VPA4 569 aa18.1■□□□□ 0.49
VSX1-201ENST00000376707 LRFN4Q6PJG9 635 aa18.1■□□□□ 0.49
VSX1-201ENST00000376707 FGFBP3Q8TAT2 258 aa18.1■□□□□ 0.49
VSX1-201ENST00000376707 SH3GL3Q99963 347 aa18.1■□□□□ 0.49
VSX1-201ENST00000376707 MEPEQ9NQ76 525 aaPredicted RBP18.1■□□□□ 0.49
VSX1-201ENST00000376707 TMEM38BQ9NVV0 291 aa18.1■□□□□ 0.49
VSX1-201ENST00000376707 SLC7A8Q9UHI5 535 aa18.1■□□□□ 0.49
VSX1-201ENST00000376707 FZR1Q9UM11 496 aa18.1■□□□□ 0.49
VSX1-201ENST00000376707 CAPN7Q9Y6W3 813 aa18.1■□□□□ 0.49
VSX1-201ENST00000376707 FAM220BPB1ANY3 271 aa18.09■□□□□ 0.49
VSX1-201ENST00000376707 BLOC1S5-TXNDC5H3BN57 136 aa18.09■□□□□ 0.49
VSX1-201ENST00000376707 IGF2P01344 180 aa18.09■□□□□ 0.49
VSX1-201ENST00000376707 IGHG1P01857 330 aa18.09■□□□□ 0.49
VSX1-201ENST00000376707 QDPRP09417 244 aa18.09■□□□□ 0.49
VSX1-201ENST00000376707 PGA4P0DJD7 388 aa18.09■□□□□ 0.49
VSX1-201ENST00000376707 PGA3P0DJD8 388 aa18.09■□□□□ 0.49
VSX1-201ENST00000376707 TCN1P20061 433 aaPredicted RBP18.09■□□□□ 0.49
VSX1-201ENST00000376707 RBM34P42696 430 aaKnown RBP18.09■□□□□ 0.49
VSX1-201ENST00000376707 CLRN1P58418 232 aa18.09■□□□□ 0.49
VSX1-201ENST00000376707 TRIP10Q15642 601 aa18.09■□□□□ 0.49
VSX1-201ENST00000376707 KRTAP24-1Q3LI83 254 aa18.09■□□□□ 0.49
VSX1-201ENST00000376707 HSP90B2PQ58FF3 399 aa18.09■□□□□ 0.49
VSX1-201ENST00000376707 ZNF584Q8IVC4 421 aa18.09■□□□□ 0.49
VSX1-201ENST00000376707 LINC01356Q8N9X3 169 aa18.09■□□□□ 0.49
VSX1-201ENST00000376707 RNF121Q9H920 327 aa18.09■□□□□ 0.49
VSX1-201ENST00000376707 MED4Q9NPJ6 270 aa18.09■□□□□ 0.49
VSX1-201ENST00000376707 DUSP13Q9UII6 198 aa18.09■□□□□ 0.49
VSX1-201ENST00000376707 MALRD1Q5VYJ5 2156 aa18.08■□□□□ 0.49
VSX1-201ENST00000376707 A0A1W2PPW3 197 aa18.08■□□□□ 0.48
VSX1-201ENST00000376707 MCIDASD6RGH6 385 aa18.08■□□□□ 0.48
VSX1-201ENST00000376707 OR5F1O95221 314 aa18.08■□□□□ 0.48
VSX1-201ENST00000376707 TAS2R41P59536 307 aa18.08■□□□□ 0.48
VSX1-201ENST00000376707 MAD2L1BPQ15013 274 aaPredicted RBP18.08■□□□□ 0.48
VSX1-201ENST00000376707 TMEM53Q6P2H8 277 aa18.08■□□□□ 0.48
VSX1-201ENST00000376707 UGT2A3Q6UWM9 527 aa18.08■□□□□ 0.48
VSX1-201ENST00000376707 LRP11Q86VZ4 500 aa18.08■□□□□ 0.48
VSX1-201ENST00000376707 SLC30A7Q8NEW0 376 aa18.08■□□□□ 0.48
VSX1-201ENST00000376707 OR4K5Q8NGD3 323 aa18.08■□□□□ 0.48
VSX1-201ENST00000376707 A0A1W2PRG6 482 aa18.07■□□□□ 0.48
VSX1-201ENST00000376707 MT-ND1P03886 318 aa18.07■□□□□ 0.48
VSX1-201ENST00000376707 THRBP10828 461 aa18.07■□□□□ 0.48
VSX1-201ENST00000376707 TNFRSF1BP20333 461 aa18.07■□□□□ 0.48
VSX1-201ENST00000376707 KDELR2P33947 212 aa18.07■□□□□ 0.48
VSX1-201ENST00000376707 MDH1P40925 334 aaKnown RBP18.07■□□□□ 0.48
VSX1-201ENST00000376707 ZNF84P51523 738 aa18.07■□□□□ 0.48
VSX1-201ENST00000376707 SEC24CP53992 1094 aa18.07■□□□□ 0.48
VSX1-201ENST00000376707 CCNIQ14094 377 aa18.07■□□□□ 0.48
VSX1-201ENST00000376707 SLC36A2Q495M3 483 aa18.07■□□□□ 0.48
VSX1-201ENST00000376707 CYBRD1Q53TN4 286 aa18.07■□□□□ 0.48
VSX1-201ENST00000376707 ELFN2Q5R3F8 820 aa18.07■□□□□ 0.48
VSX1-201ENST00000376707 DEF8Q6ZN54 512 aa18.07■□□□□ 0.48
VSX1-201ENST00000376707 SLC16A14Q7RTX9 510 aa18.07■□□□□ 0.48
VSX1-201ENST00000376707 DPPA2Q7Z7J5 298 aa18.07■□□□□ 0.48
VSX1-201ENST00000376707 OR2T12Q8NG77 320 aa18.07■□□□□ 0.48
VSX1-201ENST00000376707 RP9Q8TA86 221 aaKnown RBP18.07■□□□□ 0.48
VSX1-201ENST00000376707 C1orf198Q9H425 327 aa18.07■□□□□ 0.48
VSX1-201ENST00000376707 CDH20Q9HBT6 801 aa18.07■□□□□ 0.48
VSX1-201ENST00000376707 ARMCX1Q9P291 453 aa18.07■□□□□ 0.48
VSX1-201ENST00000376707 MYEF2Q9P2K5 600 aaKnown RBP18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms