RNA–Protein interactions for RNA: ENST00000376636.7

VPS13A-205, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 11,145 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-205ENST00000376636 SMIM7Q9BQ49 75 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 ESRP2Q9H6T0 727 aaKnown RBP10.79□□□□□ -0.68
VPS13A-205ENST00000376636 PIGLQ9Y2B2 252 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 ZNF816-ZNF321PA0A0X1KG74 233 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 SELEP16581 610 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 ERHP84090 104 aaKnown RBP10.79□□□□□ -0.68
VPS13A-205ENST00000376636 FA2HQ7L5A8 372 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 LMNTD1Q8N9Z9 388 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 ZNF516Q92618 1163 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 SIAEQ9HAT2 523 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 NME2P1O60361 137 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 FUT2Q10981 343 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 ACOT7LQ6ZUV0 252 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 TOLLIPQ9H0E2 274 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 MED1Q15648 1581 aaPredicted RBP10.79□□□□□ -0.68
VPS13A-205ENST00000376636 PIRO00625 290 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 ZNF17P17021 662 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 NKX2-1P43699 371 aaPredicted RBP10.79□□□□□ -0.68
VPS13A-205ENST00000376636 EMC10Q5UCC4 262 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 ZNF534Q76KX8 674 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 HLA-CQ95604 372 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 NKX2-4Q9H2Z4 354 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 PADI1Q9ULC6 663 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 A0A1W2PQU0 124 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 RNASEK-C17orf49H0YIS7 233 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 CYC1P08574 325 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 C21orf33P30042 268 aaPredicted RBP10.79□□□□□ -0.68
VPS13A-205ENST00000376636 BTG1P62324 171 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 LMAN2Q12907 356 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 ILKQ13418 452 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 CST6Q15828 149 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 HAGHQ16775 308 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 KHDC1LQ5JSQ8 128 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 OR2T2Q6IF00 324 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 RHOUQ7L0Q8 258 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 GPR119Q8TDV5 335 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 TVP23CQ96ET8 276 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 WDR61Q9GZS3 305 aaKnown RBP10.79□□□□□ -0.68
VPS13A-205ENST00000376636 DOCK9Q9BZ29 2069 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 ZNF593O00488 134 aaPredicted RBP10.79□□□□□ -0.68
VPS13A-205ENST00000376636 MAOBP27338 520 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 TRIM61Q5EBN2 209 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 PXDC1Q5TGL8 231 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 MFSD12Q6NUT3 480 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 TMEM184AQ6ZMB5 413 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 OR2AE1Q8NHA4 323 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 OR14A16Q8NHC5 309 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 STACQ99469 402 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 SUCNR1Q9BXA5 334 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 C8orf33Q9H7E9 229 aaPredicted RBP10.79□□□□□ -0.68
VPS13A-205ENST00000376636 FAM183AA6NL82 134 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 NCR1O76036 304 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 GLAP06280 429 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 GNB1P62873 340 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 CSNK1G2P78368 415 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 SIM1P81133 766 aaPredicted RBP10.79□□□□□ -0.68
VPS13A-205ENST00000376636 UBE3DQ7Z6J8 389 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 TIMD4Q96H15 378 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 SMG9Q9H0W8 520 aaKnown RBP10.79□□□□□ -0.68
VPS13A-205ENST00000376636 SPACA1Q9HBV2 294 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 NDRG3Q9UGV2 375 aa10.79□□□□□ -0.68
VPS13A-205ENST00000376636 ZFAND5O76080 213 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 APEX1P27695 318 aaKnown RBP10.78□□□□□ -0.68
VPS13A-205ENST00000376636 OR1D4P47884 311 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 ERVPABLB-1P60509 514 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 MOGAT2Q3SYC2 334 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 SLC22A12Q96S37 553 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 SLC17A9Q9BYT1 436 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 A6NIN4 97 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 TCEAL1Q15170 157 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 NAXDQ8IW45 347 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 EIF4E3Q8N5X7 224 aaKnown RBP10.78□□□□□ -0.68
VPS13A-205ENST00000376636 CSAG2Q9Y5P2 127 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 ZNF264O43296 627 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 GCSHP23434 173 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 PHLDA2Q53GA4 152 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 OR51A4Q8NGJ6 313 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 SCAMP4Q969E2 229 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 APIPQ96GX9 242 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 EPHX3Q9H6B9 360 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 C5AR2Q9P296 337 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 Q9Y3F1 56 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 EMP3P54852 163 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 ERVFC1-1P60608 527 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 TNFRSF17Q02223 184 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 FABP9Q0Z7S8 132 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 TFAP2EQ6VUC0 442 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 TMEM182Q6ZP80 229 aaPredicted RBP10.78□□□□□ -0.68
VPS13A-205ENST00000376636 ADOQ96SZ5 270 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 LAMA4Q16363 1823 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 DEGS1O15121 323 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 SULT1A3P0DMM9 295 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 SULT1A4P0DMN0 295 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 DDOSTP39656 456 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 VASPP50552 380 aaPredicted RBP10.78□□□□□ -0.68
VPS13A-205ENST00000376636 PIWIL3Q7Z3Z3 882 aaKnown RBP10.78□□□□□ -0.68
VPS13A-205ENST00000376636 EMG1Q92979 244 aaKnown RBP10.78□□□□□ -0.68
VPS13A-205ENST00000376636 SEH1LQ96EE3 360 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 PEBP4Q96S96 227 aa10.78□□□□□ -0.68
VPS13A-205ENST00000376636 ZCWPW2A0A1B0GU75 182 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms