RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 AIPO00170 330 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 SFTPBP07988 381 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 HCKP08631 526 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 ACSM4P0C7M7 580 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 SLC35E2P0CK97 266 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 GLI4P10075 376 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 CD34P28906 385 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 S100A11P31949 105 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 MMP15P51511 669 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 LUMP51884 338 aaPredicted RBP13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 CAMK2DQ13557 499 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 PRICKLE4Q2TBC4 344 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 SLC36A2Q495M3 483 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 PMM1Q92871 262 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 MENTQ9BUN1 341 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 POTEKPQ9BYX7 375 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 RWDD3Q9Y3V2 267 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 PLXNA3P51805 1871 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 CACNA1GO43497 2377 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 TANC1Q9C0D5 1861 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 CPED1A4D0V7 1026 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 ZNF736B4DX44 427 aaPredicted RBP13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 ZNF264O43296 627 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 ZNF432O94892 652 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 GLCEO94923 617 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 IGKV1D-16P01601 117 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 H2BFMP0C1H6 154 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 PLA2G7Q13093 441 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 TNK1Q13470 666 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 ZCCHC12Q6PEW1 402 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 ZNF615Q8N8J6 731 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 FAM3DQ96BQ1 224 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 SCMH1Q96GD3 660 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 BMFQ96LC9 184 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 CHST6Q9GZX3 395 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 ZFP64Q9NPA5 681 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 DNAJB12Q9NXW2 375 aaKnown RBP13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 OIP5O43482 229 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 MPZL1O95297 269 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 FARS2O95363 451 aaKnown RBP13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 MPC2O95563 127 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 RLN2P04090 185 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 SFTPDP35247 375 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 EFNB2P52799 333 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 RAB38P57729 211 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 OR7A5Q15622 319 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 SLC25A30Q5SVS4 291 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 STEAP1BQ6NZ63 245 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 TMEM205Q6UW68 189 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 DPY19L2P2Q6ZN68 376 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 ZNF321PQ8N8H1 164 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 TEX19Q8NA77 164 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 STEAP2Q8NFT2 490 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 OR13C9Q8NGT0 318 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 CCDC107Q8WV48 283 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 CMBLQ96DG6 245 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 LINC00052Q96N35 136 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 DHRS9Q9BPW9 319 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 CHMP1AQ9HD42 196 aaPredicted RBP13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 VSX1Q9NZR4 365 aaPredicted RBP13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 KLRF1Q9NZS2 232 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 NTMQ9P121 344 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 UPB1Q9UBR1 384 aa13.1□□□□□ -0.31
TNFRSF1B-201ENST00000376259 P2RY10O00398 339 aa13.09□□□□□ -0.31
TNFRSF1B-201ENST00000376259 GPRIN2O60269 458 aa13.09□□□□□ -0.31
TNFRSF1B-201ENST00000376259 AKR7A3O95154 331 aa13.09□□□□□ -0.31
TNFRSF1B-201ENST00000376259 MPIG6BO95866 241 aa13.09□□□□□ -0.31
TNFRSF1B-201ENST00000376259 EFEMP2O95967 443 aa13.09□□□□□ -0.31
TNFRSF1B-201ENST00000376259 OR3A2P47893 321 aa13.09□□□□□ -0.31
TNFRSF1B-201ENST00000376259 TMEM88Q6PEY1 159 aa13.09□□□□□ -0.31
TNFRSF1B-201ENST00000376259 PGLYRP3Q96LB9 341 aa13.09□□□□□ -0.31
TNFRSF1B-201ENST00000376259 ANAPC1Q9H1A4 1944 aa13.09□□□□□ -0.31
TNFRSF1B-201ENST00000376259 PDE7BQ9NP56 450 aa13.09□□□□□ -0.31
TNFRSF1B-201ENST00000376259 MRPS18AQ9NVS2 196 aaKnown RBP13.09□□□□□ -0.31
TNFRSF1B-201ENST00000376259 PRODH2Q9UF12 536 aa13.09□□□□□ -0.31
TNFRSF1B-201ENST00000376259 MRTO4Q9UKD2 239 aaKnown RBP13.09□□□□□ -0.31
TNFRSF1B-201ENST00000376259 KLHDC2Q9Y2U9 406 aa13.09□□□□□ -0.31
TNFRSF1B-201ENST00000376259 SHISA8B8ZZ34 492 aa13.09□□□□□ -0.31
TNFRSF1B-201ENST00000376259 SLC33A1O00400 549 aaPredicted RBP13.09□□□□□ -0.31
TNFRSF1B-201ENST00000376259 CTHP32929 405 aa13.09□□□□□ -0.31
TNFRSF1B-201ENST00000376259 RAP2BP61225 183 aa13.09□□□□□ -0.31
TNFRSF1B-201ENST00000376259 GK2Q14410 553 aaPredicted RBP13.09□□□□□ -0.31
TNFRSF1B-201ENST00000376259 RBMS2Q15434 407 aaKnown RBP13.09□□□□□ -0.31
TNFRSF1B-201ENST00000376259 CD226Q15762 336 aa13.09□□□□□ -0.31
TNFRSF1B-201ENST00000376259 LCN10Q6JVE6 187 aa13.09□□□□□ -0.31
TNFRSF1B-201ENST00000376259 KCTD18Q6PI47 426 aaPredicted RBP13.09□□□□□ -0.31
TNFRSF1B-201ENST00000376259 OR6V1Q8N148 313 aa13.09□□□□□ -0.31
TNFRSF1B-201ENST00000376259 C12orf45Q8N5I9 185 aaPredicted RBP13.09□□□□□ -0.31
TNFRSF1B-201ENST00000376259 OR10K1Q8NGX5 313 aa13.09□□□□□ -0.31
TNFRSF1B-201ENST00000376259 ZNF417Q8TAU3 575 aa13.09□□□□□ -0.31
TNFRSF1B-201ENST00000376259 ST8SIA4Q92187 359 aa13.09□□□□□ -0.31
TNFRSF1B-201ENST00000376259 VWCEQ96DN2 955 aa13.09□□□□□ -0.31
TNFRSF1B-201ENST00000376259 TINAGL1Q9GZM7 467 aaPredicted RBP13.09□□□□□ -0.31
TNFRSF1B-201ENST00000376259 UBQLN4Q9NRR5 601 aa13.09□□□□□ -0.31
TNFRSF1B-201ENST00000376259 SCML1Q9UN30 329 aa13.09□□□□□ -0.31
TNFRSF1B-201ENST00000376259 DOCK8Q8NF50 2099 aa13.09□□□□□ -0.31
TNFRSF1B-201ENST00000376259 PLXNA4Q9HCM2 1894 aa13.09□□□□□ -0.31
TNFRSF1B-201ENST00000376259 TMEM269A0A1B0GVZ9 245 aa13.09□□□□□ -0.31
TNFRSF1B-201ENST00000376259 TMEM82A0PJX8 343 aa13.09□□□□□ -0.31
TNFRSF1B-201ENST00000376259 AKAIN1P0CW23 69 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms