RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 BLVRAP53004 296 aa12.67□□□□□ -0.38
MSH5-202ENST00000375740 SIRPAP78324 504 aa12.67□□□□□ -0.38
MSH5-202ENST00000375740 PLCXD2Q0VAA5 305 aa12.67□□□□□ -0.38
MSH5-202ENST00000375740 ETFDHQ16134 617 aa12.67□□□□□ -0.38
MSH5-202ENST00000375740 POMZP3Q6PJE2 187 aa12.67□□□□□ -0.38
MSH5-202ENST00000375740 Q6ZTK2 550 aa12.67□□□□□ -0.38
MSH5-202ENST00000375740 TPRA1Q86W33 373 aa12.67□□□□□ -0.38
MSH5-202ENST00000375740 TAAR8Q969N4 342 aa12.67□□□□□ -0.38
MSH5-202ENST00000375740 TSSK2Q96PF2 358 aa12.67□□□□□ -0.38
MSH5-202ENST00000375740 ELF4Q99607 663 aaPredicted RBP12.67□□□□□ -0.38
MSH5-202ENST00000375740 LPAR4Q99677 370 aa12.67□□□□□ -0.38
MSH5-202ENST00000375740 PTTG3PQ9NZH4 202 aa12.67□□□□□ -0.38
MSH5-202ENST00000375740 COPS7AQ9UBW8 275 aa12.67□□□□□ -0.38
MSH5-202ENST00000375740 CTSFQ9UBX1 484 aa12.67□□□□□ -0.38
MSH5-202ENST00000375740 ZNF346Q9UL40 294 aaKnown RBP12.67□□□□□ -0.38
MSH5-202ENST00000375740 MRPS7Q9Y2R9 242 aaKnown RBP12.67□□□□□ -0.38
MSH5-202ENST00000375740 NUBP2Q9Y5Y2 271 aa12.67□□□□□ -0.38
MSH5-202ENST00000375740 ARID1BQ8NFD5 2236 aaPredicted RBP12.67□□□□□ -0.38
MSH5-202ENST00000375740 FER1L5A0AVI2 2057 aa12.67□□□□□ -0.38
MSH5-202ENST00000375740 ZNF98A6NK75 572 aa12.66□□□□□ -0.38
MSH5-202ENST00000375740 TO15178 435 aa12.66□□□□□ -0.38
MSH5-202ENST00000375740 GLCEO94923 617 aa12.66□□□□□ -0.38
MSH5-202ENST00000375740 LCN1P31025 176 aa12.66□□□□□ -0.38
MSH5-202ENST00000375740 PSMB10P40306 273 aa12.66□□□□□ -0.38
MSH5-202ENST00000375740 SLC6A8P48029 635 aa12.66□□□□□ -0.38
MSH5-202ENST00000375740 PITPNBP48739 271 aa12.66□□□□□ -0.38
MSH5-202ENST00000375740 GDI2P50395 445 aaKnown RBP12.66□□□□□ -0.38
MSH5-202ENST00000375740 ARHGDIBP52566 201 aa12.66□□□□□ -0.38
MSH5-202ENST00000375740 DGCR2P98153 550 aa12.66□□□□□ -0.38
MSH5-202ENST00000375740 CDK5R1Q15078 307 aa12.66□□□□□ -0.38
MSH5-202ENST00000375740 LINC01590Q5TEZ4 76 aa12.66□□□□□ -0.38
MSH5-202ENST00000375740 TSSK4Q6SA08 328 aa12.66□□□□□ -0.38
MSH5-202ENST00000375740 ESPNLQ6ZVH7 1005 aa12.66□□□□□ -0.38
MSH5-202ENST00000375740 SLC29A4Q7RTT9 530 aa12.66□□□□□ -0.38
MSH5-202ENST00000375740 TMPRSS9Q7Z410 1059 aa12.66□□□□□ -0.38
MSH5-202ENST00000375740 JAZF1Q86VZ6 243 aa12.66□□□□□ -0.38
MSH5-202ENST00000375740 ZNF511Q8NB15 262 aa12.66□□□□□ -0.38
MSH5-202ENST00000375740 DNAJA3Q96EY1 480 aa12.66□□□□□ -0.38
MSH5-202ENST00000375740 UBL7Q96S82 380 aaPredicted RBP12.66□□□□□ -0.38
MSH5-202ENST00000375740 SMAD5Q99717 465 aaKnown RBP12.66□□□□□ -0.38
MSH5-202ENST00000375740 NPAS1Q99742 590 aa12.66□□□□□ -0.38
MSH5-202ENST00000375740 ZNF416Q9BWM5 594 aa12.66□□□□□ -0.38
MSH5-202ENST00000375740 ZNF436Q9C0F3 470 aaPredicted RBP12.66□□□□□ -0.38
MSH5-202ENST00000375740 ZNF768Q9H5H4 540 aaKnown RBP12.66□□□□□ -0.38
MSH5-202ENST00000375740 SLC22A11Q9NSA0 550 aa12.66□□□□□ -0.38
MSH5-202ENST00000375740 KIF25Q9UIL4 384 aa12.66□□□□□ -0.38
MSH5-202ENST00000375740 RASD1Q9Y272 281 aa12.66□□□□□ -0.38
MSH5-202ENST00000375740 SIT1Q9Y3P8 196 aa12.66□□□□□ -0.38
MSH5-202ENST00000375740 CABIN1Q9Y6J0 2220 aa12.66□□□□□ -0.38
MSH5-202ENST00000375740 COL5A1P20908 1838 aaPredicted RBP12.66□□□□□ -0.38
MSH5-202ENST00000375740 A0A0G2JK05 382 aa12.66□□□□□ -0.38
MSH5-202ENST00000375740 ZNF593O00488 134 aaPredicted RBP12.66□□□□□ -0.38
MSH5-202ENST00000375740 SOX1O00570 391 aaPredicted RBP12.66□□□□□ -0.38
MSH5-202ENST00000375740 GATBO75879 557 aaKnown RBP12.66□□□□□ -0.38
MSH5-202ENST00000375740 ABCD3P28288 659 aa12.66□□□□□ -0.38
MSH5-202ENST00000375740 GRPRP30550 384 aa12.66□□□□□ -0.38
MSH5-202ENST00000375740 RPL18Q07020 188 aaKnown RBP12.66□□□□□ -0.38
MSH5-202ENST00000375740 IL10RAQ13651 578 aa12.66□□□□□ -0.38
MSH5-202ENST00000375740 SFXN4Q6P4A7 337 aa12.66□□□□□ -0.38
MSH5-202ENST00000375740 C3P1Q6ZMU1 363 aa12.66□□□□□ -0.38
MSH5-202ENST00000375740 ZNF574Q6ZN55 896 aaPredicted RBP12.66□□□□□ -0.38
MSH5-202ENST00000375740 SMIM19Q96E16 107 aa12.66□□□□□ -0.38
MSH5-202ENST00000375740 RADILQ96JH8 1075 aa12.66□□□□□ -0.38
MSH5-202ENST00000375740 ZFP3Q96NJ6 502 aa12.66□□□□□ -0.38
MSH5-202ENST00000375740 ALG12Q9BV10 488 aa12.66□□□□□ -0.38
MSH5-202ENST00000375740 MRPL15Q9P015 296 aaKnown RBP12.66□□□□□ -0.38
MSH5-202ENST00000375740 SLC6A5Q9Y345 797 aa12.66□□□□□ -0.38
MSH5-202ENST00000375740 IGHV3-20A0A0C4DH32 117 aa12.65□□□□□ -0.38
MSH5-202ENST00000375740 TRBV2A0A0J9YWF9 115 aa12.65□□□□□ -0.38
MSH5-202ENST00000375740 A8MXK9 166 aa12.65□□□□□ -0.38
MSH5-202ENST00000375740 WISP1O95388 367 aa12.65□□□□□ -0.38
MSH5-202ENST00000375740 NUDT14O95848 222 aa12.65□□□□□ -0.38
MSH5-202ENST00000375740 H2AFB2P0C5Z0 115 aa12.65□□□□□ -0.38
MSH5-202ENST00000375740 SDHAP31040 664 aa12.65□□□□□ -0.38
MSH5-202ENST00000375740 RPL35P42766 123 aaKnown RBP12.65□□□□□ -0.38
MSH5-202ENST00000375740 ARRB1P49407 418 aaPredicted RBP12.65□□□□□ -0.38
MSH5-202ENST00000375740 SLC25A35Q3KQZ1 300 aa12.65□□□□□ -0.38
MSH5-202ENST00000375740 YOD1Q5VVQ6 348 aaPredicted RBP12.65□□□□□ -0.38
MSH5-202ENST00000375740 RPL22L1Q6P5R6 122 aaKnown RBP12.65□□□□□ -0.38
MSH5-202ENST00000375740 OVCH2Q7RTZ1 564 aa12.65□□□□□ -0.38
MSH5-202ENST00000375740 TEX19Q8NA77 164 aa12.65□□□□□ -0.38
MSH5-202ENST00000375740 PLPP5Q8NEB5 264 aa12.65□□□□□ -0.38
MSH5-202ENST00000375740 PIGKQ92643 395 aa12.65□□□□□ -0.38
MSH5-202ENST00000375740 TBL1XR1Q9BZK7 514 aa12.65□□□□□ -0.38
MSH5-202ENST00000375740 SRA1Q9HD15 236 aaKnown RBP12.65□□□□□ -0.38
MSH5-202ENST00000375740 PCDHB16Q9NRJ7 776 aa12.65□□□□□ -0.38
MSH5-202ENST00000375740 PCDHGA9Q9Y5G4 932 aaKnown RBP12.65□□□□□ -0.38
MSH5-202ENST00000375740 A0A0B4J203 849 aa12.65□□□□□ -0.38
MSH5-202ENST00000375740 A0A1B0GVI7 797 aa12.65□□□□□ -0.38
MSH5-202ENST00000375740 IDSB3KWA1 339 aa12.65□□□□□ -0.38
MSH5-202ENST00000375740 ALG1L2C9J202 215 aa12.65□□□□□ -0.38
MSH5-202ENST00000375740 PSMD9O00233 223 aa12.65□□□□□ -0.38
MSH5-202ENST00000375740 HIST1H2ABP04908 130 aa12.65□□□□□ -0.38
MSH5-202ENST00000375740 APEHP13798 732 aaKnown RBP12.65□□□□□ -0.38
MSH5-202ENST00000375740 CXCR1P25024 350 aa12.65□□□□□ -0.38
MSH5-202ENST00000375740 EDNRAP25101 427 aa12.65□□□□□ -0.38
MSH5-202ENST00000375740 PNLIPRP2P54317 469 aa12.65□□□□□ -0.38
MSH5-202ENST00000375740 C1QL3Q5VWW1 255 aa12.65□□□□□ -0.38
MSH5-202ENST00000375740 COX15Q7KZN9 410 aa12.65□□□□□ -0.38
MSH5-202ENST00000375740 HIST3H2AQ7L7L0 130 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms