RNA–Protein interactions for RNA: ENST00000374358.4

TMEM50A-201, Transcript of transmembrane protein 50A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM50A, Length 2,683 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50A-201ENST00000374358 LIPHQ8WWY8 451 aa14.08□□□□□ -0.16
TMEM50A-201ENST00000374358 PHYHIPQ92561 330 aa14.08□□□□□ -0.16
TMEM50A-201ENST00000374358 HIST1H2ACQ93077 130 aa14.08□□□□□ -0.16
TMEM50A-201ENST00000374358 NPAS1Q99742 590 aa14.08□□□□□ -0.16
TMEM50A-201ENST00000374358 SLITRK2Q9H156 845 aa14.08□□□□□ -0.16
TMEM50A-201ENST00000374358 PPIEQ9UNP9 301 aaKnown RBP14.08□□□□□ -0.16
TMEM50A-201ENST00000374358 MOKQ9UQ07 419 aa14.08□□□□□ -0.16
TMEM50A-201ENST00000374358 C2orf72A6NCS6 295 aa14.07□□□□□ -0.16
TMEM50A-201ENST00000374358 NME1P15531 152 aaKnown RBP14.07□□□□□ -0.16
TMEM50A-201ENST00000374358 CXCR1P25024 350 aa14.07□□□□□ -0.16
TMEM50A-201ENST00000374358 IL12BP29460 328 aa14.07□□□□□ -0.16
TMEM50A-201ENST00000374358 CCKBRP32239 447 aa14.07□□□□□ -0.16
TMEM50A-201ENST00000374358 OR1D5P58170 312 aa14.07□□□□□ -0.16
TMEM50A-201ENST00000374358 SQSTM1Q13501 440 aa14.07□□□□□ -0.16
TMEM50A-201ENST00000374358 EXOSC2Q13868 293 aaKnown RBP14.07□□□□□ -0.16
TMEM50A-201ENST00000374358 ASPHD2Q6ICH7 369 aa14.07□□□□□ -0.16
TMEM50A-201ENST00000374358 TSEN15Q8WW01 171 aaKnown RBP14.07□□□□□ -0.16
TMEM50A-201ENST00000374358 SLC46A1Q96NT5 459 aa14.07□□□□□ -0.16
TMEM50A-201ENST00000374358 MGAT4CQ9UBM8 478 aa14.07□□□□□ -0.16
TMEM50A-201ENST00000374358 NUP210LQ5VU65 1888 aa14.07□□□□□ -0.16
TMEM50A-201ENST00000374358 ASCC3Q8N3C0 2202 aaKnown RBP14.07□□□□□ -0.16
TMEM50A-201ENST00000374358 CNTRLQ7Z7A1 2325 aa14.07□□□□□ -0.16
TMEM50A-201ENST00000374358 IGHV3-20A0A0C4DH32 117 aa14.07□□□□□ -0.16
TMEM50A-201ENST00000374358 H0YIG0 161 aa14.07□□□□□ -0.16
TMEM50A-201ENST00000374358 CDC40O60508 579 aaKnown RBP eCLIP14.07□□□□□ -0.16
TMEM50A-201ENST00000374358 MPZL1O95297 269 aa14.07□□□□□ -0.16
TMEM50A-201ENST00000374358 TXNDC12O95881 172 aa14.07□□□□□ -0.16
TMEM50A-201ENST00000374358 RENP00797 406 aa14.07□□□□□ -0.16
TMEM50A-201ENST00000374358 ITGA5P08648 1049 aa14.07□□□□□ -0.16
TMEM50A-201ENST00000374358 APEHP13798 732 aaKnown RBP14.07□□□□□ -0.16
TMEM50A-201ENST00000374358 IL11P20809 199 aa14.07□□□□□ -0.16
TMEM50A-201ENST00000374358 EBPQ15125 230 aaKnown RBP14.07□□□□□ -0.16
TMEM50A-201ENST00000374358 FAM69AQ5T7M9 428 aa14.07□□□□□ -0.16
TMEM50A-201ENST00000374358 LANCL3Q6ZV70 420 aa14.07□□□□□ -0.16
TMEM50A-201ENST00000374358 ELMOD2Q8IZ81 293 aa14.07□□□□□ -0.16
TMEM50A-201ENST00000374358 PLPP7Q8NBV4 271 aa14.07□□□□□ -0.16
TMEM50A-201ENST00000374358 TSTD1Q8NFU3 115 aa14.07□□□□□ -0.16
TMEM50A-201ENST00000374358 KLHL15Q96M94 604 aa14.07□□□□□ -0.16
TMEM50A-201ENST00000374358 ADAM19Q9H013 955 aa14.07□□□□□ -0.16
TMEM50A-201ENST00000374358 ELOVL3Q9HB03 270 aa14.07□□□□□ -0.16
TMEM50A-201ENST00000374358 FRG2CA6NGY1 282 aa14.06□□□□□ -0.16
TMEM50A-201ENST00000374358 BGLAPP02818 100 aa14.06□□□□□ -0.16
TMEM50A-201ENST00000374358 SPARCP09486 303 aa14.06□□□□□ -0.16
TMEM50A-201ENST00000374358 RAG2P55895 527 aa14.06□□□□□ -0.16
TMEM50A-201ENST00000374358 C19orf57Q0VDD7 668 aa14.06□□□□□ -0.16
TMEM50A-201ENST00000374358 NSDHLQ15738 373 aa14.06□□□□□ -0.16
TMEM50A-201ENST00000374358 ACKR1Q16570 336 aa14.06□□□□□ -0.16
TMEM50A-201ENST00000374358 SIX5Q8N196 739 aa14.06□□□□□ -0.16
TMEM50A-201ENST00000374358 METTL21AQ8WXB1 218 aa14.06□□□□□ -0.16
TMEM50A-201ENST00000374358 NXPE2Q96DL1 559 aa14.06□□□□□ -0.16
TMEM50A-201ENST00000374358 C4orf45Q96LM5 186 aa14.06□□□□□ -0.16
TMEM50A-201ENST00000374358 PTDSS2Q9BVG9 487 aa14.06□□□□□ -0.16
TMEM50A-201ENST00000374358 ACTR6Q9GZN1 396 aa14.06□□□□□ -0.16
TMEM50A-201ENST00000374358 EXOSC3Q9NQT5 275 aaKnown RBP14.06□□□□□ -0.16
TMEM50A-201ENST00000374358 SCP2D1Q9UJQ7 156 aa14.06□□□□□ -0.16
TMEM50A-201ENST00000374358 FREM2Q5SZK8 3169 aa14.06□□□□□ -0.16
TMEM50A-201ENST00000374358 MUC3AQ02505 3323 aa14.06□□□□□ -0.16
TMEM50A-201ENST00000374358 BLACEA4D250 179 aa14.06□□□□□ -0.16
TMEM50A-201ENST00000374358 SLC16A7O60669 478 aa14.06□□□□□ -0.16
TMEM50A-201ENST00000374358 ZNF254O75437 659 aa14.06□□□□□ -0.16
TMEM50A-201ENST00000374358 CTLA4P16410 223 aa14.06□□□□□ -0.16
TMEM50A-201ENST00000374358 CD38P28907 300 aa14.06□□□□□ -0.16
TMEM50A-201ENST00000374358 TSPAN5P62079 268 aa14.06□□□□□ -0.16
TMEM50A-201ENST00000374358 MFGE8Q08431 387 aaPredicted RBP14.06□□□□□ -0.16
TMEM50A-201ENST00000374358 PLCXD2Q0VAA5 305 aa14.06□□□□□ -0.16
TMEM50A-201ENST00000374358 PCGF3Q3KNV8 242 aa14.06□□□□□ -0.16
TMEM50A-201ENST00000374358 TOR2AQ5JU69 321 aa14.06□□□□□ -0.16
TMEM50A-201ENST00000374358 COL13A1Q5TAT6 717 aaPredicted RBP14.06□□□□□ -0.16
TMEM50A-201ENST00000374358 OR7E24Q6IFN5 339 aa14.06□□□□□ -0.16
TMEM50A-201ENST00000374358 SEZ6L2Q6UXD5 910 aa14.06□□□□□ -0.16
TMEM50A-201ENST00000374358 BPHLQ86WA6 291 aaPredicted RBP14.06□□□□□ -0.16
TMEM50A-201ENST00000374358 OR1L3Q8NH93 324 aa14.06□□□□□ -0.16
TMEM50A-201ENST00000374358 OTOSQ8NHW6 89 aa14.06□□□□□ -0.16
TMEM50A-201ENST00000374358 CMTM3Q96MX0 182 aa14.06□□□□□ -0.16
TMEM50A-201ENST00000374358 SORCS2Q96PQ0 1159 aa14.06□□□□□ -0.16
TMEM50A-201ENST00000374358 COMMD4Q9H0A8 199 aa14.06□□□□□ -0.16
TMEM50A-201ENST00000374358 MRPL22Q9NWU5 206 aaKnown RBP14.06□□□□□ -0.16
TMEM50A-201ENST00000374358 MYEF2Q9P2K5 600 aaKnown RBP14.06□□□□□ -0.16
TMEM50A-201ENST00000374358 IGKV3D-11A0A0A0MRZ8 115 aa14.05□□□□□ -0.16
TMEM50A-201ENST00000374358 A0A1B0GVI7 797 aa14.05□□□□□ -0.16
TMEM50A-201ENST00000374358 H3BMH7 237 aa14.05□□□□□ -0.16
TMEM50A-201ENST00000374358 PYCARD-AS1I3L0S3 204 aa14.05□□□□□ -0.16
TMEM50A-201ENST00000374358 SIX6O95475 246 aa14.05□□□□□ -0.16
TMEM50A-201ENST00000374358 CALCBP10092 127 aa14.05□□□□□ -0.16
TMEM50A-201ENST00000374358 HLA-DOBP13765 273 aa14.05□□□□□ -0.16
TMEM50A-201ENST00000374358 MAPK3P27361 379 aaPredicted RBP14.05□□□□□ -0.16
TMEM50A-201ENST00000374358 INSM1Q01101 510 aaPredicted RBP14.05□□□□□ -0.16
TMEM50A-201ENST00000374358 CFHR1Q03591 330 aa14.05□□□□□ -0.16
TMEM50A-201ENST00000374358 SNTA1Q13424 505 aa14.05□□□□□ -0.16
TMEM50A-201ENST00000374358 CSRP2Q16527 193 aa14.05□□□□□ -0.16
TMEM50A-201ENST00000374358 TCTE1Q5JU00 501 aa14.05□□□□□ -0.16
TMEM50A-201ENST00000374358 RFPL4BQ6ZWI9 263 aa14.05□□□□□ -0.16
TMEM50A-201ENST00000374358 GPR148Q8TDV2 347 aa14.05□□□□□ -0.16
TMEM50A-201ENST00000374358 TBL1XR1Q9BZK7 514 aa14.05□□□□□ -0.16
TMEM50A-201ENST00000374358 B3GNT2Q9NY97 397 aa14.05□□□□□ -0.16
TMEM50A-201ENST00000374358 TRBV5-7A0A0A0MS05 114 aa14.05□□□□□ -0.16
TMEM50A-201ENST00000374358 LILRA5A6NI73 299 aa14.05□□□□□ -0.16
TMEM50A-201ENST00000374358 ACOT7O00154 380 aa14.05□□□□□ -0.16
TMEM50A-201ENST00000374358 XKRYO14609 159 aa14.05□□□□□ -0.16
TMEM50A-201ENST00000374358 SCO1O75880 301 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms