RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 PRICKLE3O43900 615 aaPredicted RBP11.76□□□□□ -0.53
PRPF4-201ENST00000374198 SNRNP70P08621 437 aaKnown RBP11.76□□□□□ -0.53
PRPF4-201ENST00000374198 PBLDP30039 288 aaPredicted RBP11.76□□□□□ -0.53
PRPF4-201ENST00000374198 NAA10P41227 235 aaPredicted RBP11.76□□□□□ -0.53
PRPF4-201ENST00000374198 CDX1P47902 265 aaPredicted RBP11.76□□□□□ -0.53
PRPF4-201ENST00000374198 GSK3AP49840 483 aa11.76□□□□□ -0.53
PRPF4-201ENST00000374198 CASP6P55212 293 aa11.76□□□□□ -0.53
PRPF4-201ENST00000374198 RAB4BP61018 213 aa11.76□□□□□ -0.53
PRPF4-201ENST00000374198 CCINQ13939 588 aa11.76□□□□□ -0.53
PRPF4-201ENST00000374198 CLINT1Q14677 625 aa11.76□□□□□ -0.53
PRPF4-201ENST00000374198 TMEM64Q6YI46 380 aa11.76□□□□□ -0.53
PRPF4-201ENST00000374198 ETFBKMTQ8IXQ9 262 aa11.76□□□□□ -0.53
PRPF4-201ENST00000374198 SLC35F2Q8IXU6 374 aa11.76□□□□□ -0.53
PRPF4-201ENST00000374198 OR2L13Q8N349 312 aa11.76□□□□□ -0.53
PRPF4-201ENST00000374198 OR2G2Q8NGZ5 317 aa11.76□□□□□ -0.53
PRPF4-201ENST00000374198 FOXRED1Q96CU9 486 aaPredicted RBP11.76□□□□□ -0.53
PRPF4-201ENST00000374198 KIRREL1Q96J84 757 aa11.76□□□□□ -0.53
PRPF4-201ENST00000374198 OR7D2Q96RA2 312 aa11.76□□□□□ -0.53
PRPF4-201ENST00000374198 CNN2Q99439 309 aaKnown RBP11.76□□□□□ -0.53
PRPF4-201ENST00000374198 ELF4Q99607 663 aaPredicted RBP11.76□□□□□ -0.53
PRPF4-201ENST00000374198 PIGQQ9BRB3 760 aa11.76□□□□□ -0.53
PRPF4-201ENST00000374198 ZNF426Q9BUY5 554 aa11.76□□□□□ -0.53
PRPF4-201ENST00000374198 SIGLEC7Q9Y286 467 aa11.76□□□□□ -0.53
PRPF4-201ENST00000374198 YBX2Q9Y2T7 364 aaKnown RBP11.76□□□□□ -0.53
PRPF4-201ENST00000374198 KPTNQ9Y664 436 aa11.76□□□□□ -0.53
PRPF4-201ENST00000374198 BNIP3LO60238 219 aa11.76□□□□□ -0.53
PRPF4-201ENST00000374198 CTAG2O75638 210 aa11.76□□□□□ -0.53
PRPF4-201ENST00000374198 ZFPL1O95159 310 aa11.76□□□□□ -0.53
PRPF4-201ENST00000374198 RAB3DO95716 219 aa11.76□□□□□ -0.53
PRPF4-201ENST00000374198 FCGR3AP08637 254 aa11.76□□□□□ -0.53
PRPF4-201ENST00000374198 HPGDP15428 266 aa11.76□□□□□ -0.53
PRPF4-201ENST00000374198 NME2P22392 152 aa11.76□□□□□ -0.53
PRPF4-201ENST00000374198 DDTP30046 118 aa11.76□□□□□ -0.53
PRPF4-201ENST00000374198 OR1G1P47890 313 aa11.76□□□□□ -0.53
PRPF4-201ENST00000374198 RNF4P78317 190 aa11.76□□□□□ -0.53
PRPF4-201ENST00000374198 SSBP1Q04837 148 aaKnown RBP11.76□□□□□ -0.53
PRPF4-201ENST00000374198 AWAT1Q58HT5 328 aa11.76□□□□□ -0.53
PRPF4-201ENST00000374198 NSUN5P2Q63ZY6 315 aa11.76□□□□□ -0.53
PRPF4-201ENST00000374198 WDR88Q6ZMY6 472 aa11.76□□□□□ -0.53
PRPF4-201ENST00000374198 FAM129CQ86XR2 697 aa11.76□□□□□ -0.53
PRPF4-201ENST00000374198 ADAM2Q99965 735 aa11.76□□□□□ -0.53
PRPF4-201ENST00000374198 C2orf88Q9BSF0 95 aa11.76□□□□□ -0.53
PRPF4-201ENST00000374198 MS4A8Q9BY19 250 aa11.76□□□□□ -0.53
PRPF4-201ENST00000374198 PARPBPQ9NWS1 579 aa11.76□□□□□ -0.53
PRPF4-201ENST00000374198 ZNF840PA6NDX5 716 aa11.75□□□□□ -0.53
PRPF4-201ENST00000374198 BTBD17A6NE02 478 aa11.75□□□□□ -0.53
PRPF4-201ENST00000374198 MBTPS2O43462 519 aa11.75□□□□□ -0.53
PRPF4-201ENST00000374198 FBXO24O75426 580 aa11.75□□□□□ -0.53
PRPF4-201ENST00000374198 POP4O95707 220 aaKnown RBP11.75□□□□□ -0.53
PRPF4-201ENST00000374198 WNT11O96014 354 aa11.75□□□□□ -0.53
PRPF4-201ENST00000374198 IFNA2P01563 188 aa11.75□□□□□ -0.53
PRPF4-201ENST00000374198 IFNA10P01566 189 aa11.75□□□□□ -0.53
PRPF4-201ENST00000374198 IFNA17P01571 189 aa11.75□□□□□ -0.53
PRPF4-201ENST00000374198 ADH1AP07327 375 aa11.75□□□□□ -0.53
PRPF4-201ENST00000374198 TAS2R19P59542 299 aa11.75□□□□□ -0.53
PRPF4-201ENST00000374198 NANOS3P60323 173 aaKnown RBP11.75□□□□□ -0.53
PRPF4-201ENST00000374198 HMGN3Q15651 99 aa11.75□□□□□ -0.53
PRPF4-201ENST00000374198 LBHQ53QV2 105 aaPredicted RBP11.75□□□□□ -0.53
PRPF4-201ENST00000374198 FRRS1Q6ZNA5 592 aa11.75□□□□□ -0.53
PRPF4-201ENST00000374198 C1QL4Q86Z23 238 aa11.75□□□□□ -0.53
PRPF4-201ENST00000374198 FAM24BQ8N5W8 94 aa11.75□□□□□ -0.53
PRPF4-201ENST00000374198 OR9A1PQ8NGU1 263 aa11.75□□□□□ -0.53
PRPF4-201ENST00000374198 RPS4Y2Q8TD47 263 aa11.75□□□□□ -0.53
PRPF4-201ENST00000374198 IP6K3Q96PC2 410 aa11.75□□□□□ -0.53
PRPF4-201ENST00000374198 ZNF576Q9H609 170 aa11.75□□□□□ -0.53
PRPF4-201ENST00000374198 GAR1Q9NY12 217 aaKnown RBP11.75□□□□□ -0.53
PRPF4-201ENST00000374198 WSB2Q9NYS7 404 aaPredicted RBP11.75□□□□□ -0.53
PRPF4-201ENST00000374198 CALML5Q9NZT1 146 aa11.75□□□□□ -0.53
PRPF4-201ENST00000374198 CA14Q9ULX7 337 aa11.75□□□□□ -0.53
PRPF4-201ENST00000374198 ICAM5Q9UMF0 924 aa11.75□□□□□ -0.53
PRPF4-201ENST00000374198 TSPAN11A1L157 253 aa11.75□□□□□ -0.53
PRPF4-201ENST00000374198 TCAPO15273 167 aa11.75□□□□□ -0.53
PRPF4-201ENST00000374198 FCMRO60667 390 aa11.75□□□□□ -0.53
PRPF4-201ENST00000374198 ZIC2O95409 532 aaPredicted RBP11.75□□□□□ -0.53
PRPF4-201ENST00000374198 CA3P07451 260 aa11.75□□□□□ -0.53
PRPF4-201ENST00000374198 F3P13726 295 aa11.75□□□□□ -0.53
PRPF4-201ENST00000374198 CSRP1P21291 193 aaKnown RBP11.75□□□□□ -0.53
PRPF4-201ENST00000374198 NTSP30990 170 aa11.75□□□□□ -0.53
PRPF4-201ENST00000374198 EFNB2P52799 333 aa11.75□□□□□ -0.53
PRPF4-201ENST00000374198 SCAND1P57086 179 aa11.75□□□□□ -0.53
PRPF4-201ENST00000374198 TMEM205Q6UW68 189 aa11.75□□□□□ -0.53
PRPF4-201ENST00000374198 UNQ6494/PRO21346Q6UXR6 183 aa11.75□□□□□ -0.53
PRPF4-201ENST00000374198 KDF1Q8NAX2 398 aaPredicted RBP11.75□□□□□ -0.53
PRPF4-201ENST00000374198 SFXN5Q8TD22 340 aa11.75□□□□□ -0.53
PRPF4-201ENST00000374198 TMEM239Q8WW34 195 aa11.75□□□□□ -0.53
PRPF4-201ENST00000374198 DCUN1D4Q92564 292 aa11.75□□□□□ -0.53
PRPF4-201ENST00000374198 MOAP1Q96BY2 351 aa11.75□□□□□ -0.53
PRPF4-201ENST00000374198 RIOK2Q9BVS4 552 aaKnown RBP11.75□□□□□ -0.53
PRPF4-201ENST00000374198 CSAG2Q9Y5P2 127 aa11.75□□□□□ -0.53
PRPF4-201ENST00000374198 WIF1Q9Y5W5 379 aa11.75□□□□□ -0.53
PRPF4-201ENST00000374198 NUP210Q8TEM1 1887 aaPredicted RBP11.75□□□□□ -0.53
PRPF4-201ENST00000374198 TRAV27A0A087WT01 109 aa11.74□□□□□ -0.53
PRPF4-201ENST00000374198 M0QYG6 137 aa11.74□□□□□ -0.53
PRPF4-201ENST00000374198 AGPAT2O15120 278 aa11.74□□□□□ -0.53
PRPF4-201ENST00000374198 PPM1DO15297 605 aa11.74□□□□□ -0.53
PRPF4-201ENST00000374198 AMY2AP04746 511 aa11.74□□□□□ -0.53
PRPF4-201ENST00000374198 PSMB6P28072 239 aa11.74□□□□□ -0.53
PRPF4-201ENST00000374198 DVL1P1P54792 670 aaPredicted RBP11.74□□□□□ -0.53
PRPF4-201ENST00000374198 ACTBP60709 375 aa11.74□□□□□ -0.53
PRPF4-201ENST00000374198 ACTG1P63261 375 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms