RNA–Protein interactions for RNA: ENST00000374038.7

RBM39-204, Transcript of RNA binding motif protein 39, human

TSL 5

Gene RBM39, Length 1,026 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-204	ENST00000374038	MYBPC1	Q00872	1141 aa		13.77	□□□□□ -0.21
RBM39-204	ENST00000374038	GABRA6	Q16445	453 aa		13.77	□□□□□ -0.21
RBM39-204	ENST00000374038	SLC36A3	Q495N2	470 aa		13.77	□□□□□ -0.21
RBM39-204	ENST00000374038	OR7E24	Q6IFN5	339 aa		13.77	□□□□□ -0.21
RBM39-204	ENST00000374038	LRFN4	Q6PJG9	635 aa		13.77	□□□□□ -0.21
RBM39-204	ENST00000374038	ZNF771	Q7L3S4	317 aa	Predicted RBP	13.77	□□□□□ -0.21
RBM39-204	ENST00000374038	OR1K1	Q8NGR3	316 aa		13.77	□□□□□ -0.21
RBM39-204	ENST00000374038	TEX47	Q8TBZ9	253 aa		13.77	□□□□□ -0.21
RBM39-204	ENST00000374038	MCHR2	Q969V1	340 aa		13.77	□□□□□ -0.21
RBM39-204	ENST00000374038	NMD3	Q96D46	503 aa	Known RBP	13.77	□□□□□ -0.21
RBM39-204	ENST00000374038	WFIKKN1	Q96NZ8	548 aa		13.77	□□□□□ -0.21
RBM39-204	ENST00000374038	USB1	Q9BQ65	265 aa	Known RBP	13.77	□□□□□ -0.21
RBM39-204	ENST00000374038	MED18	Q9BUE0	208 aa		13.77	□□□□□ -0.21
RBM39-204	ENST00000374038	TSSK6	Q9BXA6	273 aa		13.77	□□□□□ -0.21
RBM39-204	ENST00000374038	SMURF2	Q9HAU4	748 aa		13.77	□□□□□ -0.21
RBM39-204	ENST00000374038	PAPOLB	Q9NRJ5	636 aa	Known RBP	13.77	□□□□□ -0.21
RBM39-204	ENST00000374038	CRIM1	Q9NZV1	1036 aa		13.77	□□□□□ -0.21
RBM39-204	ENST00000374038	POFUT2	Q9Y2G5	429 aa		13.77	□□□□□ -0.21
RBM39-204	ENST00000374038	PRSS37	A4D1T9	235 aa		13.76	□□□□□ -0.21
RBM39-204	ENST00000374038	ZNF99	A8MXY4	864 aa	Predicted RBP	13.76	□□□□□ -0.21
RBM39-204	ENST00000374038		H7C1C5	153 aa		13.76	□□□□□ -0.21
RBM39-204	ENST00000374038	IDH3B	O43837	385 aa		13.76	□□□□□ -0.21
RBM39-204	ENST00000374038	NOS3	P29474	1203 aa		13.76	□□□□□ -0.21
RBM39-204	ENST00000374038	ZNF133	P52736	654 aa	Predicted RBP	13.76	□□□□□ -0.21
RBM39-204	ENST00000374038	LCN6	P62502	163 aa		13.76	□□□□□ -0.21
RBM39-204	ENST00000374038	FMOD	Q06828	376 aa		13.76	□□□□□ -0.21
RBM39-204	ENST00000374038	RCN1	Q15293	331 aa		13.76	□□□□□ -0.21
RBM39-204	ENST00000374038	STK11	Q15831	433 aa		13.76	□□□□□ -0.21
RBM39-204	ENST00000374038	HIST2H2BC	Q6DN03	193 aa		13.76	□□□□□ -0.21
RBM39-204	ENST00000374038	ADCK1	Q86TW2	530 aa		13.76	□□□□□ -0.21
RBM39-204	ENST00000374038	OR2T33	Q8NG76	320 aa		13.76	□□□□□ -0.21
RBM39-204	ENST00000374038	OR4Q3	Q8NH05	313 aa		13.76	□□□□□ -0.21
RBM39-204	ENST00000374038	FNDC8	Q8TC99	324 aa		13.76	□□□□□ -0.21
RBM39-204	ENST00000374038	DACH2	Q96NX9	599 aa		13.76	□□□□□ -0.21
RBM39-204	ENST00000374038	MUS81	Q96NY9	551 aa		13.76	□□□□□ -0.21
RBM39-204	ENST00000374038	SLC24A3	Q9HC58	644 aa		13.76	□□□□□ -0.21
RBM39-204	ENST00000374038	KRT84	Q9NSB2	600 aa		13.76	□□□□□ -0.21
RBM39-204	ENST00000374038	BAIAP2	Q9UQB8	552 aa		13.76	□□□□□ -0.21
RBM39-204	ENST00000374038	SLC22A23	A1A5C7	686 aa		13.75	□□□□□ -0.21
RBM39-204	ENST00000374038	OR5H1	A6NKK0	313 aa		13.75	□□□□□ -0.21
RBM39-204	ENST00000374038	DHH	O43323	396 aa		13.75	□□□□□ -0.21
RBM39-204	ENST00000374038	AHCYL1	O43865	530 aa		13.75	□□□□□ -0.21
RBM39-204	ENST00000374038	SEC14L2	O76054	403 aa		13.75	□□□□□ -0.21
RBM39-204	ENST00000374038	SLC2A10	O95528	541 aa		13.75	□□□□□ -0.21
RBM39-204	ENST00000374038	HIST1H1C	P16403	213 aa	Known RBP	13.75	□□□□□ -0.21
RBM39-204	ENST00000374038	POU1F1	P28069	291 aa		13.75	□□□□□ -0.21
RBM39-204	ENST00000374038	ELF3	P78545	371 aa	Predicted RBP	13.75	□□□□□ -0.21
RBM39-204	ENST00000374038	ARF1	P84077	181 aa	Known RBP	13.75	□□□□□ -0.21
RBM39-204	ENST00000374038	PPP2R2B	Q00005	443 aa		13.75	□□□□□ -0.21
RBM39-204	ENST00000374038	TIMM23B	Q5SRD1	257 aa		13.75	□□□□□ -0.21
RBM39-204	ENST00000374038	THEM4	Q5T1C6	240 aa		13.75	□□□□□ -0.21
RBM39-204	ENST00000374038	C10orf128	Q5T292	105 aa		13.75	□□□□□ -0.21
RBM39-204	ENST00000374038	KDM4D	Q6B0I6	523 aa		13.75	□□□□□ -0.21
RBM39-204	ENST00000374038	ANKRD16	Q6P6B7	361 aa		13.75	□□□□□ -0.21
RBM39-204	ENST00000374038	C22orf34	Q6ZV56	151 aa		13.75	□□□□□ -0.21
RBM39-204	ENST00000374038	PTCHD4	Q6ZW05	846 aa		13.75	□□□□□ -0.21
RBM39-204	ENST00000374038	P2RY8	Q86VZ1	359 aa		13.75	□□□□□ -0.21
RBM39-204	ENST00000374038	JAZF1	Q86VZ6	243 aa		13.75	□□□□□ -0.21
RBM39-204	ENST00000374038	PARP8	Q8N3A8	854 aa		13.75	□□□□□ -0.21
RBM39-204	ENST00000374038	LNX2	Q8N448	690 aa		13.75	□□□□□ -0.21
RBM39-204	ENST00000374038	C17orf78	Q8N4C9	275 aa		13.75	□□□□□ -0.21
RBM39-204	ENST00000374038	FAM222B	Q8WU58	562 aa		13.75	□□□□□ -0.21
RBM39-204	ENST00000374038	ZC3HAV1L	Q96H79	300 aa	Known RBP	13.75	□□□□□ -0.21
RBM39-204	ENST00000374038	BOD1	Q96IK1	185 aa		13.75	□□□□□ -0.21
RBM39-204	ENST00000374038	RBP7	Q96R05	134 aa		13.75	□□□□□ -0.21
RBM39-204	ENST00000374038	CIB1	Q99828	191 aa		13.75	□□□□□ -0.21
RBM39-204	ENST00000374038	FOXB1	Q99853	325 aa		13.75	□□□□□ -0.21
RBM39-204	ENST00000374038	RBM4B	Q9BQ04	359 aa	Known RBP	13.75	□□□□□ -0.21
RBM39-204	ENST00000374038	RBM4	Q9BWF3	364 aa	Known RBP	13.75	□□□□□ -0.21
RBM39-204	ENST00000374038	NELFA	Q9H3P2	528 aa		13.75	□□□□□ -0.21
RBM39-204	ENST00000374038	PKDREJ	Q9NTG1	2253 aa		13.75	□□□□□ -0.21
RBM39-204	ENST00000374038		A0A096LPE4	126 aa		13.74	□□□□□ -0.21
RBM39-204	ENST00000374038	IGKV1D-43	A0A0B4J1Z2	117 aa		13.74	□□□□□ -0.21
RBM39-204	ENST00000374038		A0A1W2PPZ6	126 aa		13.74	□□□□□ -0.21
RBM39-204	ENST00000374038	MITF	O75030	526 aa	Predicted RBP	13.74	□□□□□ -0.21
RBM39-204	ENST00000374038	THBD	P07204	575 aa		13.74	□□□□□ -0.21
RBM39-204	ENST00000374038	EPX	P11678	715 aa		13.74	□□□□□ -0.21
RBM39-204	ENST00000374038	ANPEP	P15144	967 aa		13.74	□□□□□ -0.21
RBM39-204	ENST00000374038	IGFBP5	P24593	272 aa		13.74	□□□□□ -0.21
RBM39-204	ENST00000374038	HOXC12	P31275	282 aa		13.74	□□□□□ -0.21
RBM39-204	ENST00000374038	CDKN2A	P42771	156 aa	Known RBP	13.74	□□□□□ -0.21
RBM39-204	ENST00000374038	ZNF84	P51523	738 aa		13.74	□□□□□ -0.21
RBM39-204	ENST00000374038	TAB1	Q15750	504 aa		13.74	□□□□□ -0.21
RBM39-204	ENST00000374038	PGGHG	Q32M88	737 aa		13.74	□□□□□ -0.21
RBM39-204	ENST00000374038	TBRG1	Q3YBR2	411 aa		13.74	□□□□□ -0.21
RBM39-204	ENST00000374038	HIKESHI	Q53FT3	197 aa		13.74	□□□□□ -0.21
RBM39-204	ENST00000374038	SLC35F1	Q5T1Q4	408 aa		13.74	□□□□□ -0.21
RBM39-204	ENST00000374038	SLC27A4	Q6P1M0	643 aa		13.74	□□□□□ -0.21
RBM39-204	ENST00000374038	LEG1	Q6P5S2	330 aa		13.74	□□□□□ -0.21
RBM39-204	ENST00000374038	SLC25A47	Q6Q0C1	308 aa		13.74	□□□□□ -0.21
RBM39-204	ENST00000374038	IQCF1	Q8N6M8	205 aa		13.74	□□□□□ -0.21
RBM39-204	ENST00000374038	SDR9C7	Q8NEX9	313 aa		13.74	□□□□□ -0.21
RBM39-204	ENST00000374038	OR4K13	Q8NH42	304 aa		13.74	□□□□□ -0.21
RBM39-204	ENST00000374038	HSD17B8	Q92506	261 aa		13.74	□□□□□ -0.21
RBM39-204	ENST00000374038	NSMAF	Q92636	917 aa		13.74	□□□□□ -0.21
RBM39-204	ENST00000374038	BCL2L2	Q92843	193 aa	Predicted RBP	13.74	□□□□□ -0.21
RBM39-204	ENST00000374038	OSBPL10	Q9BXB5	764 aa		13.74	□□□□□ -0.21
RBM39-204	ENST00000374038	SYT4	Q9H2B2	425 aa		13.74	□□□□□ -0.21
RBM39-204	ENST00000374038	SLC17A5	Q9NRA2	495 aa		13.74	□□□□□ -0.21
RBM39-204	ENST00000374038	VSX1	Q9NZR4	365 aa	Predicted RBP	13.74	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms