RNA–Protein interactions for RNA: ENST00000372733.3

SDC4-201, Transcript of syndecan 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDC4, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4-201ENST00000372733 KIR3DL2P43630 455 aa14.86□□□□□ -0.03
SDC4-201ENST00000372733 NFATC4Q14934 902 aa14.86□□□□□ -0.03
SDC4-201ENST00000372733 ZNF74Q16587 644 aa14.86□□□□□ -0.03
SDC4-201ENST00000372733 ALPK2Q86TB3 2170 aa14.86□□□□□ -0.03
SDC4-201ENST00000372733 LRRC75AQ8NAA5 344 aa14.86□□□□□ -0.03
SDC4-201ENST00000372733 GPR148Q8TDV2 347 aa14.86□□□□□ -0.03
SDC4-201ENST00000372733 TSEN15Q8WW01 171 aaKnown RBP14.86□□□□□ -0.03
SDC4-201ENST00000372733 RSC1A1Q92681 617 aa14.86□□□□□ -0.03
SDC4-201ENST00000372733 DNAJA3Q96EY1 480 aa14.86□□□□□ -0.03
SDC4-201ENST00000372733 PBX4Q9BYU1 374 aa14.86□□□□□ -0.03
SDC4-201ENST00000372733 Q9N2J8 555 aa14.86□□□□□ -0.03
SDC4-201ENST00000372733 PCOLCE2Q9UKZ9 415 aa14.86□□□□□ -0.03
SDC4-201ENST00000372733 HIF3AQ9Y2N7 669 aa14.86□□□□□ -0.03
SDC4-201ENST00000372733 OR10H1Q9Y4A9 318 aa14.86□□□□□ -0.03
SDC4-201ENST00000372733 HRH3Q9Y5N1 445 aa14.86□□□□□ -0.03
SDC4-201ENST00000372733 ACHEP22303 614 aa14.86□□□□□ -0.03
SDC4-201ENST00000372733 SDHAP31040 664 aa14.86□□□□□ -0.03
SDC4-201ENST00000372733 MESTQ5EB52 335 aa14.86□□□□□ -0.03
SDC4-201ENST00000372733 OR6K3Q8NGY3 331 aa14.86□□□□□ -0.03
SDC4-201ENST00000372733 RBM18Q96H35 190 aaKnown RBP14.86□□□□□ -0.03
SDC4-201ENST00000372733 WDR92Q96MX6 357 aa14.86□□□□□ -0.03
SDC4-201ENST00000372733 SLC38A3Q99624 504 aa14.86□□□□□ -0.03
SDC4-201ENST00000372733 TWSG1Q9GZX9 223 aa14.86□□□□□ -0.03
SDC4-201ENST00000372733 CRISPLD2Q9H0B8 497 aa14.86□□□□□ -0.03
SDC4-201ENST00000372733 REV3LO60673 3130 aa14.85□□□□□ -0.03
SDC4-201ENST00000372733 IFI6P09912 130 aa14.85□□□□□ -0.03
SDC4-201ENST00000372733 CT45A8P0DMV1 189 aa14.85□□□□□ -0.03
SDC4-201ENST00000372733 CT45A9P0DMV2 189 aa14.85□□□□□ -0.03
SDC4-201ENST00000372733 MST1P26927 711 aa14.85□□□□□ -0.03
SDC4-201ENST00000372733 CT45A2Q5DJT8 189 aa14.85□□□□□ -0.03
SDC4-201ENST00000372733 STEAP1BQ6NZ63 245 aa14.85□□□□□ -0.03
SDC4-201ENST00000372733 TMED4Q7Z7H5 227 aa14.85□□□□□ -0.03
SDC4-201ENST00000372733 SDR16C5Q8N3Y7 309 aa14.85□□□□□ -0.03
SDC4-201ENST00000372733 BCORP1Q8N888 145 aa14.85□□□□□ -0.03
SDC4-201ENST00000372733 CLEC1AQ8NC01 280 aa14.85□□□□□ -0.03
SDC4-201ENST00000372733 ELF4Q99607 663 aaPredicted RBP14.85□□□□□ -0.03
SDC4-201ENST00000372733 KXD1Q9BQD3 176 aa14.85□□□□□ -0.03
SDC4-201ENST00000372733 COL4A2P08572 1712 aa14.85□□□□□ -0.03
SDC4-201ENST00000372733 POU2F2P09086 479 aa14.85□□□□□ -0.03
SDC4-201ENST00000372733 PRSS3P35030 304 aa14.85□□□□□ -0.03
SDC4-201ENST00000372733 ERV3-1Q14264 604 aa14.85□□□□□ -0.03
SDC4-201ENST00000372733 GRM7Q14831 915 aa14.85□□□□□ -0.03
SDC4-201ENST00000372733 CD226Q15762 336 aa14.85□□□□□ -0.03
SDC4-201ENST00000372733 MPPED2Q15777 294 aa14.85□□□□□ -0.03
SDC4-201ENST00000372733 WDR38Q5JTN6 314 aa14.85□□□□□ -0.03
SDC4-201ENST00000372733 LY6G6FQ5SQ64 297 aa14.85□□□□□ -0.03
SDC4-201ENST00000372733 C4orf45Q96LM5 186 aa14.85□□□□□ -0.03
SDC4-201ENST00000372733 FOXN4Q96NZ1 517 aa14.85□□□□□ -0.03
SDC4-201ENST00000372733 LPAR4Q99677 370 aa14.85□□□□□ -0.03
SDC4-201ENST00000372733 TMEM212A6NML5 194 aa14.84□□□□□ -0.03
SDC4-201ENST00000372733 M0QYG6 137 aa14.84□□□□□ -0.03
SDC4-201ENST00000372733 PRAMEF2O60811 474 aa14.84□□□□□ -0.03
SDC4-201ENST00000372733 PLATP00750 562 aa14.84□□□□□ -0.03
SDC4-201ENST00000372733 MYOGP15173 224 aa14.84□□□□□ -0.03
SDC4-201ENST00000372733 CCKBRP32239 447 aa14.84□□□□□ -0.03
SDC4-201ENST00000372733 RPL18Q07020 188 aaKnown RBP14.84□□□□□ -0.03
SDC4-201ENST00000372733 EIF4E3Q8N5X7 224 aaKnown RBP14.84□□□□□ -0.03
SDC4-201ENST00000372733 PXT1Q8NFP0 134 aa14.84□□□□□ -0.03
SDC4-201ENST00000372733 ST8SIA2Q92186 375 aa14.84□□□□□ -0.03
SDC4-201ENST00000372733 MCHR2Q969V1 340 aa14.84□□□□□ -0.03
SDC4-201ENST00000372733 FAM3DQ96BQ1 224 aa14.84□□□□□ -0.03
SDC4-201ENST00000372733 ZNF524Q96C55 264 aa14.84□□□□□ -0.03
SDC4-201ENST00000372733 TSPAN32Q96QS1 320 aa14.84□□□□□ -0.03
SDC4-201ENST00000372733 KLHDC3Q9BQ90 382 aa14.84□□□□□ -0.03
SDC4-201ENST00000372733 SYT4Q9H2B2 425 aa14.84□□□□□ -0.03
SDC4-201ENST00000372733 FAM60AQ9NP50 221 aa14.84□□□□□ -0.03
SDC4-201ENST00000372733 IFT46Q9NQC8 304 aa14.84□□□□□ -0.03
SDC4-201ENST00000372733 HRASLS2Q9NWW9 162 aa14.84□□□□□ -0.03
SDC4-201ENST00000372733 KCNG2Q9UJ96 466 aa14.84□□□□□ -0.03
SDC4-201ENST00000372733 GTF2A1LQ9UNN4 478 aa14.84□□□□□ -0.03
SDC4-201ENST00000372733 ERVK-19Q9WJR5 959 aa14.84□□□□□ -0.03
SDC4-201ENST00000372733 NUP210LQ5VU65 1888 aa14.84□□□□□ -0.03
SDC4-201ENST00000372733 FANCMQ8IYD8 2048 aa14.84□□□□□ -0.03
SDC4-201ENST00000372733 A0A0A6YYC8 382 aaPredicted RBP14.84□□□□□ -0.03
SDC4-201ENST00000372733 RFPL4AA6NLU0 287 aa14.84□□□□□ -0.03
SDC4-201ENST00000372733 C2orf74A8MZ97 194 aa14.84□□□□□ -0.03
SDC4-201ENST00000372733 RFPL4AL1F8VTS6 287 aa14.84□□□□□ -0.03
SDC4-201ENST00000372733 I3L1I5 382 aaPredicted RBP14.84□□□□□ -0.03
SDC4-201ENST00000372733 TPPPO94811 219 aa14.84□□□□□ -0.03
SDC4-201ENST00000372733 WNT11O96014 354 aa14.84□□□□□ -0.03
SDC4-201ENST00000372733 ALOX5APP20292 161 aa14.84□□□□□ -0.03
SDC4-201ENST00000372733 FNTBP49356 437 aa14.84□□□□□ -0.03
SDC4-201ENST00000372733 ARHGDIBP52566 201 aa14.84□□□□□ -0.03
SDC4-201ENST00000372733 RAB11BQ15907 218 aa14.84□□□□□ -0.03
SDC4-201ENST00000372733 C2orf76Q3KRA6 126 aa14.84□□□□□ -0.03
SDC4-201ENST00000372733 YAF2Q8IY57 180 aa14.84□□□□□ -0.03
SDC4-201ENST00000372733 GABRG1Q8N1C3 465 aa14.84□□□□□ -0.03
SDC4-201ENST00000372733 OR10K1Q8NGX5 313 aa14.84□□□□□ -0.03
SDC4-201ENST00000372733 C16orf52Q8NHV5 167 aa14.84□□□□□ -0.03
SDC4-201ENST00000372733 MARC2Q969Z3 335 aa14.84□□□□□ -0.03
SDC4-201ENST00000372733 G6PC3Q9BUM1 346 aa14.84□□□□□ -0.03
SDC4-201ENST00000372733 SLC19A3Q9BZV2 496 aa14.84□□□□□ -0.03
SDC4-201ENST00000372733 ATG5Q9H1Y0 275 aa14.84□□□□□ -0.03
SDC4-201ENST00000372733 WDR13Q9H1Z4 485 aa14.84□□□□□ -0.03
SDC4-201ENST00000372733 MMP25Q9NPA2 562 aa14.84□□□□□ -0.03
SDC4-201ENST00000372733 SLC6A5Q9Y345 797 aa14.84□□□□□ -0.03
SDC4-201ENST00000372733 A0A0J9YY10 115 aa14.83□□□□□ -0.03
SDC4-201ENST00000372733 CDC40O60508 579 aaKnown RBP eCLIP14.83□□□□□ -0.03
SDC4-201ENST00000372733 SCAND1P57086 179 aa14.83□□□□□ -0.03
SDC4-201ENST00000372733 TMEM196Q5HYL7 178 aa14.83□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms