RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 C21orf140B9A014 251 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 SELENOFO60613 162 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 TIAF1O95411 115 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 AHSA1O95433 338 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 IGHMP01871 453 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 UCHL1P09936 223 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 TRAPPC2P0DI81 140 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 TRAPPC2BP0DI82 140 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 SLC2A2P11168 524 aaPredicted RBP12.69□□□□□ -0.38
LDB3-204ENST00000372066 EDNRAP25101 427 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 ACVR1BP36896 505 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 TMED10P49755 219 aaKnown RBP12.69□□□□□ -0.38
LDB3-204ENST00000372066 C17orf67Q0P5P2 114 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 IL18Q14116 193 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 INSL4Q14641 139 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 MFSD13AQ14CX5 517 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 IDNKQ5T6J7 187 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 HACD4Q5VWC8 232 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 ZNF385CQ66K41 422 aaPredicted RBP12.69□□□□□ -0.38
LDB3-204ENST00000372066 PWWP2BQ6NUJ5 590 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 ZNF544Q6NX49 715 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 MZT2BQ6NZ67 158 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 UNQ9370/PRO34162Q6UXP9 181 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 APCDD1LQ8NCL9 501 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 C19orf18Q8NEA5 215 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 IL17RDQ8NFM7 739 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 RNF138Q8WVD3 245 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 THRSPQ92748 146 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 ZC3HAV1LQ96H79 300 aaKnown RBP12.69□□□□□ -0.38
LDB3-204ENST00000372066 CMTM3Q96MX0 182 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 TSPAN32Q96QS1 320 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 RTN4RQ9BZR6 473 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 ZCCHC4Q9H5U6 513 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 MARCH7Q9H992 704 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 INIPQ9NRY2 104 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 CYSLTR2Q9NS75 346 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 ABRACLQ9P1F3 81 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 TMED7Q9Y3B3 224 aa12.69□□□□□ -0.38
LDB3-204ENST00000372066 FLNCQ14315 2725 aa12.68□□□□□ -0.38
LDB3-204ENST00000372066 NOTOA8MTQ0 251 aa12.68□□□□□ -0.38
LDB3-204ENST00000372066 FAM25AB3EWG3 89 aa12.68□□□□□ -0.38
LDB3-204ENST00000372066 FAM25CB3EWG5 89 aa12.68□□□□□ -0.38
LDB3-204ENST00000372066 FAM25GB3EWG6 89 aa12.68□□□□□ -0.38
LDB3-204ENST00000372066 XKRYO14609 159 aa12.68□□□□□ -0.38
LDB3-204ENST00000372066 PDCD5O14737 125 aa12.68□□□□□ -0.38
LDB3-204ENST00000372066 SCO2O43819 266 aa12.68□□□□□ -0.38
LDB3-204ENST00000372066 SUSD5O60279 629 aa12.68□□□□□ -0.38
LDB3-204ENST00000372066 NCR1O76036 304 aa12.68□□□□□ -0.38
LDB3-204ENST00000372066 RFX2P48378 723 aa12.68□□□□□ -0.38
LDB3-204ENST00000372066 MAP2K6P52564 334 aa12.68□□□□□ -0.38
LDB3-204ENST00000372066 EMP2P54851 167 aa12.68□□□□□ -0.38
LDB3-204ENST00000372066 YIF1BQ5BJH7 314 aa12.68□□□□□ -0.38
LDB3-204ENST00000372066 MESTQ5EB52 335 aa12.68□□□□□ -0.38
LDB3-204ENST00000372066 ZNF684Q5T5D7 378 aa12.68□□□□□ -0.38
LDB3-204ENST00000372066 EEF1A1P5Q5VTE0 462 aa12.68□□□□□ -0.38
LDB3-204ENST00000372066 AGAP6Q5VW22 663 aa12.68□□□□□ -0.38
LDB3-204ENST00000372066 FAM199XQ6PEV8 388 aaPredicted RBP12.68□□□□□ -0.38
LDB3-204ENST00000372066 PAPD4Q6PIY7 484 aaKnown RBP12.68□□□□□ -0.38
LDB3-204ENST00000372066 BAIAP2L2Q6UXY1 529 aa12.68□□□□□ -0.38
LDB3-204ENST00000372066 ZNF517Q6ZMY9 492 aaPredicted RBP12.68□□□□□ -0.38
LDB3-204ENST00000372066 NRARPQ7Z6K4 114 aa12.68□□□□□ -0.38
LDB3-204ENST00000372066 TIGD4Q8IY51 512 aa12.68□□□□□ -0.38
LDB3-204ENST00000372066 Q8N402 240 aa12.68□□□□□ -0.38
LDB3-204ENST00000372066 OR51L1Q8NGJ5 315 aa12.68□□□□□ -0.38
LDB3-204ENST00000372066 ZPLD1Q8TCW7 415 aa12.68□□□□□ -0.38
LDB3-204ENST00000372066 HPS1Q92902 700 aa12.68□□□□□ -0.38
LDB3-204ENST00000372066 KLHL15Q96M94 604 aa12.68□□□□□ -0.38
LDB3-204ENST00000372066 AGAP4Q96P64 663 aa12.68□□□□□ -0.38
LDB3-204ENST00000372066 PSMG3-AS1Q96PY0 264 aa12.68□□□□□ -0.38
LDB3-204ENST00000372066 AKIRIN1Q9H9L7 192 aaPredicted RBP12.68□□□□□ -0.38
LDB3-204ENST00000372066 NXT1Q9UKK6 140 aaKnown RBP12.68□□□□□ -0.38
LDB3-204ENST00000372066 PAIP2BQ9ULR5 123 aaKnown RBP12.68□□□□□ -0.38
LDB3-204ENST00000372066 COPS3Q9UNS2 423 aa12.68□□□□□ -0.38
LDB3-204ENST00000372066 FKBP7Q9Y680 259 aa12.68□□□□□ -0.38
LDB3-204ENST00000372066 RELNP78509 3460 aa12.67□□□□□ -0.38
LDB3-204ENST00000372066 A0A0G2JK05 382 aa12.67□□□□□ -0.38
LDB3-204ENST00000372066 A0A1W2PRG6 482 aa12.67□□□□□ -0.38
LDB3-204ENST00000372066 TTLL8A6PVC2 850 aa12.67□□□□□ -0.38
LDB3-204ENST00000372066 ZNF432O94892 652 aa12.67□□□□□ -0.38
LDB3-204ENST00000372066 PDGFAP04085 211 aa12.67□□□□□ -0.38
LDB3-204ENST00000372066 NPR2P20594 1047 aa12.67□□□□□ -0.38
LDB3-204ENST00000372066 MAPK3P27361 379 aaPredicted RBP12.67□□□□□ -0.38
LDB3-204ENST00000372066 APEX1P27695 318 aaKnown RBP12.67□□□□□ -0.38
LDB3-204ENST00000372066 MSX1P28360 303 aa12.67□□□□□ -0.38
LDB3-204ENST00000372066 THBS2P35442 1172 aa12.67□□□□□ -0.38
LDB3-204ENST00000372066 EIF2B2P49770 351 aaKnown RBP12.67□□□□□ -0.38
LDB3-204ENST00000372066 OR2B6P58173 313 aa12.67□□□□□ -0.38
LDB3-204ENST00000372066 RPS15P62841 145 aaKnown RBP12.67□□□□□ -0.38
LDB3-204ENST00000372066 EGR3Q06889 387 aa12.67□□□□□ -0.38
LDB3-204ENST00000372066 C1orf140Q5VVS0 124 aa12.67□□□□□ -0.38
LDB3-204ENST00000372066 RPTNQ6XPR3 784 aa12.67□□□□□ -0.38
LDB3-204ENST00000372066 NR2C2APQ86WQ0 139 aa12.67□□□□□ -0.38
LDB3-204ENST00000372066 CDC20BQ86Y33 519 aa12.67□□□□□ -0.38
LDB3-204ENST00000372066 RFLNBQ8N5W9 214 aa12.67□□□□□ -0.38
LDB3-204ENST00000372066 SCAIQ8N9R8 606 aa12.67□□□□□ -0.38
LDB3-204ENST00000372066 HGDQ93099 445 aa12.67□□□□□ -0.38
LDB3-204ENST00000372066 MRI1Q9BV20 369 aa12.67□□□□□ -0.38
LDB3-204ENST00000372066 PTDSS2Q9BVG9 487 aa12.67□□□□□ -0.38
LDB3-204ENST00000372066 GPR87Q9BY21 358 aa12.67□□□□□ -0.38
LDB3-204ENST00000372066 WDR76Q9H967 626 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms