RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 DUOX1Q9NRD9 1551 aa14.17□□□□□ -0.14
COL5A1-201ENST00000371817 SNRPGP15A8MWD9 76 aa14.17□□□□□ -0.14
COL5A1-201ENST00000371817 PLSCR1O15162 318 aa14.17□□□□□ -0.14
COL5A1-201ENST00000371817 ERVFC1-1P60608 527 aa14.17□□□□□ -0.14
COL5A1-201ENST00000371817 APBB3O95704 486 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 LY86O95711 162 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 SELPP16109 830 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 SP3Q02447 781 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 ZNF684Q5T5D7 378 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 OR2A2Q6IF42 318 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 TRNP1Q6NT89 227 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 CNTN4Q8IWV2 1026 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 UBQLN4Q9NRR5 601 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 B4GALT6Q9UBX8 382 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 TDRD6O60522 2096 aaKnown RBP14.16□□□□□ -0.14
COL5A1-201ENST00000371817 TBX19O60806 448 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 SMIM18P0DKX4 95 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 DEFA4P12838 97 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 AKR1C3P42330 323 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 LEXMQ3ZCV2 418 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 ZNF787Q6DD87 383 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 RNF113BQ8IZP6 322 aaKnown RBP14.16□□□□□ -0.14
COL5A1-201ENST00000371817 OR5V1Q9UGF6 321 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 SLC23A1Q9UHI7 598 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 FAM221BA6H8Z2 402 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 ZNF26P17031 533 aaPredicted RBP14.16□□□□□ -0.14
COL5A1-201ENST00000371817 GCH1P30793 250 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 CSNK1A1P48729 337 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 TSPAN31Q12999 210 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 TMEM268Q5VZI3 342 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 TMPRSS11FQ6ZWK6 438 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 DIO2Q92813 273 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 PHYHIPLQ96FC7 376 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 N4BP2Q86UW6 1770 aaPredicted RBP14.16□□□□□ -0.14
COL5A1-201ENST00000371817 PLSCR5A0PG75 271 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 CCSO14618 274 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 EIF4EP06730 217 aaKnown RBP14.16□□□□□ -0.14
COL5A1-201ENST00000371817 SOX18P35713 384 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 ZNF93P35789 620 aaPredicted RBP14.16□□□□□ -0.14
COL5A1-201ENST00000371817 TXNDC8Q6A555 127 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 GDPD3Q7L5L3 318 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 SUSD3Q96L08 255 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 WWTR1Q9GZV5 400 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 MED20Q9H944 212 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 LMAN1LQ9HAT1 526 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 FBXO34Q9NWN3 711 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 MIOXQ9UGB7 285 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 AKAP12Q02952 1782 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 FRS3O43559 492 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 PAPLNO95428 1278 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 IGHG1P01857 330 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 NXNL2Q5VZ03 156 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 NMES1Q9C002 83 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 LTB4RQ15722 352 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 MARCH8Q5T0T0 291 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 KIRREL1Q96J84 757 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 FZD8Q9H461 694 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 MUTYHQ9UIF7 546 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 SRYQ05066 204 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 MPPED2Q15777 294 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 THEM4Q5T1C6 240 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 GRINAQ7Z429 371 aa14.16□□□□□ -0.14
COL5A1-201ENST00000371817 RNASEK-C17orf49H0YIS7 233 aa14.15□□□□□ -0.14
COL5A1-201ENST00000371817 RPL17P18621 184 aaKnown RBP14.15□□□□□ -0.14
COL5A1-201ENST00000371817 RXFP4Q8TDU9 374 aa14.15□□□□□ -0.14
COL5A1-201ENST00000371817 C11orf84Q9BUA3 381 aaPredicted RBP14.15□□□□□ -0.14
COL5A1-201ENST00000371817 DIMT1Q9UNQ2 313 aaKnown RBP14.15□□□□□ -0.14
COL5A1-201ENST00000371817 A0A1B0GUH1 482 aa14.15□□□□□ -0.14
COL5A1-201ENST00000371817 OR2M5A3KFT3 312 aa14.15□□□□□ -0.14
COL5A1-201ENST00000371817 ALDOCP09972 364 aaKnown RBP14.15□□□□□ -0.14
COL5A1-201ENST00000371817 ZNF28P17035 718 aa14.15□□□□□ -0.14
COL5A1-201ENST00000371817 TANKQ92844 425 aa14.15□□□□□ -0.14
COL5A1-201ENST00000371817 SCMH1Q96GD3 660 aa14.15□□□□□ -0.14
COL5A1-201ENST00000371817 GPR88Q9GZN0 384 aa14.15□□□□□ -0.14
COL5A1-201ENST00000371817 GKN1Q9NS71 199 aa14.15□□□□□ -0.14
COL5A1-201ENST00000371817 FAM208AQ9UK61 1670 aaKnown RBP14.15□□□□□ -0.14
COL5A1-201ENST00000371817 PHRF1Q9P1Y6 1649 aaKnown RBP14.15□□□□□ -0.14
COL5A1-201ENST00000371817 P04436 131 aa14.15□□□□□ -0.14
COL5A1-201ENST00000371817 FCGR2AP12318 317 aa14.15□□□□□ -0.14
COL5A1-201ENST00000371817 GALR1P47211 349 aa14.15□□□□□ -0.14
COL5A1-201ENST00000371817 PPP2CAP67775 309 aa14.15□□□□□ -0.14
COL5A1-201ENST00000371817 IKZF1Q13422 519 aa14.15□□□□□ -0.14
COL5A1-201ENST00000371817 OR1Q1Q15612 314 aa14.15□□□□□ -0.14
COL5A1-201ENST00000371817 PRSS45Q7RTY3 260 aa14.15□□□□□ -0.14
COL5A1-201ENST00000371817 DUS3LQ96G46 650 aaKnown RBP14.15□□□□□ -0.14
COL5A1-201ENST00000371817 FAAP24Q9BTP7 215 aa14.15□□□□□ -0.14
COL5A1-201ENST00000371817 CA14Q9ULX7 337 aa14.15□□□□□ -0.14
COL5A1-201ENST00000371817 SPO11Q9Y5K1 396 aa14.15□□□□□ -0.14
COL5A1-201ENST00000371817 PIK3C2BO00750 1634 aa14.15□□□□□ -0.14
COL5A1-201ENST00000371817 DIP2CQ9Y2E4 1556 aa14.15□□□□□ -0.14
COL5A1-201ENST00000371817 SIGLEC6O43699 453 aa14.15□□□□□ -0.14
COL5A1-201ENST00000371817 TAS2R45P59539 299 aa14.15□□□□□ -0.14
COL5A1-201ENST00000371817 SHC2P98077 582 aa14.15□□□□□ -0.14
COL5A1-201ENST00000371817 NHLH1Q02575 133 aa14.15□□□□□ -0.14
COL5A1-201ENST00000371817 NHLH2Q02577 135 aa14.15□□□□□ -0.14
COL5A1-201ENST00000371817 PDE7AQ13946 482 aa14.15□□□□□ -0.14
COL5A1-201ENST00000371817 OR7A5Q15622 319 aa14.15□□□□□ -0.14
COL5A1-201ENST00000371817 SLC36A2Q495M3 483 aa14.15□□□□□ -0.14
COL5A1-201ENST00000371817 WBP2NLQ6ICG8 309 aa14.15□□□□□ -0.14
COL5A1-201ENST00000371817 FAM57BQ71RH2 274 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms