RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 OR5D14Q8NGL3 314 aa11.71□□□□□ -0.53
GPC4-201ENST00000370828 SMIM4Q8WVI0 70 aa11.71□□□□□ -0.53
GPC4-201ENST00000370828 TMEM234Q8WY98 164 aa11.71□□□□□ -0.53
GPC4-201ENST00000370828 PDXPQ96GD0 296 aa11.71□□□□□ -0.53
GPC4-201ENST00000370828 SORCS2Q96PQ0 1159 aa11.71□□□□□ -0.53
GPC4-201ENST00000370828 TMEM212A6NML5 194 aa11.71□□□□□ -0.54
GPC4-201ENST00000370828 AQP7O14520 342 aa11.71□□□□□ -0.54
GPC4-201ENST00000370828 PLA2G10O15496 165 aa11.71□□□□□ -0.54
GPC4-201ENST00000370828 APOA2P02652 100 aa11.71□□□□□ -0.54
GPC4-201ENST00000370828 CD3DP04234 171 aa11.71□□□□□ -0.54
GPC4-201ENST00000370828 LPLP06858 475 aa11.71□□□□□ -0.54
GPC4-201ENST00000370828 TACR3P29371 465 aa11.71□□□□□ -0.54
GPC4-201ENST00000370828 DIO1P49895 249 aa11.71□□□□□ -0.54
GPC4-201ENST00000370828 FKBP1BP68106 108 aa11.71□□□□□ -0.54
GPC4-201ENST00000370828 OR2B11Q5JQS5 317 aa11.71□□□□□ -0.54
GPC4-201ENST00000370828 TMPRSS7Q7RTY8 843 aa11.71□□□□□ -0.54
GPC4-201ENST00000370828 SLC2A12Q8TD20 617 aa11.71□□□□□ -0.54
GPC4-201ENST00000370828 THAP3Q8WTV1 239 aaPredicted RBP11.71□□□□□ -0.54
GPC4-201ENST00000370828 PPP1R1CQ8WVI7 109 aa11.71□□□□□ -0.54
GPC4-201ENST00000370828 MCOLN1Q9GZU1 580 aa11.71□□□□□ -0.54
GPC4-201ENST00000370828 ZNF337Q9Y3M9 751 aa11.71□□□□□ -0.54
GPC4-201ENST00000370828 ZNF142P52746 1687 aaPredicted RBP11.7□□□□□ -0.54
GPC4-201ENST00000370828 OR52A4PA6NMU1 304 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 ZNF354AO60765 605 aaPredicted RBP11.7□□□□□ -0.54
GPC4-201ENST00000370828 PSMB6P28072 239 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 ARRB1P49407 418 aaPredicted RBP11.7□□□□□ -0.54
GPC4-201ENST00000370828 PLCXD2Q0VAA5 305 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 LTB4RQ15722 352 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 ABHD12BQ7Z5M8 362 aaPredicted RBP11.7□□□□□ -0.54
GPC4-201ENST00000370828 TMEM25Q86YD3 366 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 CBLN2Q8IUK8 224 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 DUSP18Q8NEJ0 188 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 OR4C15Q8NGM1 316 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 PEX11GQ96HA9 241 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 LRIG1Q96JA1 1093 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 P2RY12Q9H244 342 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 RRAGCQ9HB90 399 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 CGGBP1Q9UFW8 167 aaPredicted RBP11.7□□□□□ -0.54
GPC4-201ENST00000370828 IL17BQ9UHF5 180 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 KDM4EB2RXH2 506 aaPredicted RBP11.7□□□□□ -0.54
GPC4-201ENST00000370828 KLK8O60259 260 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 AIFM1O95831 613 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 OR4E1P0C645 316 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 HOXC13P31276 330 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 MVDP53602 400 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 NHLRC1Q6VVB1 395 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 ZNF836Q6ZNA1 936 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 C7orf61Q8IZ16 206 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 PFN4Q8NHR9 129 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 CHAC2Q8WUX2 184 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 AKR1E2Q96JD6 320 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 SGCZQ96LD1 299 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 METTL7AQ9H8H3 244 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 SPHK2Q9NRA0 654 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 AKAP11Q9UKA4 1901 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 ZNF207O43670 478 aaKnown RBP11.7□□□□□ -0.54
GPC4-201ENST00000370828 CLEC3AO75596 197 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 PRSS23O95084 383 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 RPL29P47914 159 aaKnown RBP11.7□□□□□ -0.54
GPC4-201ENST00000370828 SMAD2Q15796 467 aaKnown RBP11.7□□□□□ -0.54
GPC4-201ENST00000370828 PRR27Q6MZM9 219 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 GABRG1Q8N1C3 465 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 FIBINQ8TAL6 211 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 MITD1Q8WV92 249 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 PHYHIPQ92561 330 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 EXOSC3Q9NQT5 275 aaKnown RBP11.7□□□□□ -0.54
GPC4-201ENST00000370828 C1orf123Q9NWV4 160 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 LOC100289279A0A1B0GTE1 492 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 A0A1W2PPQ1 181 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 HIDE1A8MVS5 230 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 KLF8O95600 359 aaPredicted RBP11.7□□□□□ -0.54
GPC4-201ENST00000370828 TSPAN12O95859 305 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 CST2P09228 141 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 HTD2P86397 168 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 ACVR1Q04771 509 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 GSG1Q2KHT4 349 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 GLDNQ6ZMI3 551 aaPredicted RBP11.7□□□□□ -0.54
GPC4-201ENST00000370828 C1orf87Q8N0U7 546 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 TM4SF18Q96CE8 201 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 SDSLQ96GA7 329 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 POM121Q96HA1 1249 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 SLC25A31Q9H0C2 315 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 RHOFQ9HBH0 211 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 TLR9Q9NR96 1032 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 SIRT7Q9NRC8 400 aa11.7□□□□□ -0.54
GPC4-201ENST00000370828 PLEKHB1Q9UF11 243 aaPredicted RBP11.7□□□□□ -0.54
GPC4-201ENST00000370828 A0A087WV62 115 aa11.69□□□□□ -0.54
GPC4-201ENST00000370828 A0A1B0GV90 55 aa11.69□□□□□ -0.54
GPC4-201ENST00000370828 BCL2L11O43521 198 aa11.69□□□□□ -0.54
GPC4-201ENST00000370828 TAS2R60P59551 318 aa11.69□□□□□ -0.54
GPC4-201ENST00000370828 ADIRFQ15847 76 aa11.69□□□□□ -0.54
GPC4-201ENST00000370828 NRSN1Q8IZ57 195 aa11.69□□□□□ -0.54
GPC4-201ENST00000370828 PTP4A1Q93096 173 aa11.69□□□□□ -0.54
GPC4-201ENST00000370828 SCMH1Q96GD3 660 aa11.69□□□□□ -0.54
GPC4-201ENST00000370828 TRMT2BQ96GJ1 504 aaKnown RBP11.69□□□□□ -0.54
GPC4-201ENST00000370828 RTP3Q9BQQ7 232 aa11.69□□□□□ -0.54
GPC4-201ENST00000370828 FGF20Q9NP95 211 aaPredicted RBP11.69□□□□□ -0.54
GPC4-201ENST00000370828 PPP1R3CQ9UQK1 317 aa11.69□□□□□ -0.54
GPC4-201ENST00000370828 SELENOPP49908 381 aa11.69□□□□□ -0.54
GPC4-201ENST00000370828 MMP15P51511 669 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms