RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 ZNF426Q9BUY5 554 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 RBM4Q9BWF3 364 aaKnown RBP3.18□□□□□ -1.9
MCF2-202ENST00000370573 VCX3BQ9H321 246 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 TOR3AQ9H497 397 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 ANKRD19PQ9H560 264 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 MEPEQ9NQ76 525 aaPredicted RBP3.18□□□□□ -1.9
MCF2-202ENST00000370573 C20orf141Q9NUB4 165 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 MED17Q9NVC6 651 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 CNIH4Q9P003 139 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 OSGIN1Q9UJX0 560 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 PTPRQQ9UMZ3 2332 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 CACNA1GO43497 2377 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 A0A087WUJ7 227 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 TEX13CA0A0J9YWL9 993 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 ARRDC5A6NEK1 342 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 LRRC3CA6NJW4 275 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 CTDSP2O14595 271 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 CHP2O43745 196 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 OR10H3O60404 316 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 ZIC3O60481 467 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 CLIC3O95833 236 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 GNAO1P09471 354 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 FREM3P0C091 2139 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 RFPL3SP0C7P2 107 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 GP1BBP13224 206 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 UQCRBP14927 111 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 ZNF24P17028 368 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 FUT1P19526 365 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 PGCP20142 388 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 CCNA2P20248 432 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 CNR1P21554 472 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 IGFBP5P24593 272 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 GSSP48637 474 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 ARHGDIAP52565 204 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 COPZ1P61923 177 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 RPP38P78345 283 aaKnown RBP3.18□□□□□ -1.9
MCF2-202ENST00000370573 OC90Q02509 493 aaPredicted RBP3.18□□□□□ -1.9
MCF2-202ENST00000370573 TLE3Q04726 772 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 EGR4Q05215 589 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 PRKCDQ05655 676 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 LTBQ06643 244 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 FHL1Q13642 323 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 CBFBQ13951 182 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 OR1C1Q15619 314 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 SLC25A53Q5H9E4 307 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 ALG10BQ5I7T1 473 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 TIGD3Q6B0B8 471 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 IGFL2Q6UWQ7 119 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 Q6ZPB1 254 aaPredicted RBP3.18□□□□□ -1.9
MCF2-202ENST00000370573 Q6ZRM9 215 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 PLCZ1Q86YW0 608 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 GPALPP1Q8IXQ4 340 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 OR5M1Q8NGP8 315 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 ZNF563Q8TA94 476 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 DNAJA4Q8WW22 397 aaPredicted RBP3.18□□□□□ -1.9
MCF2-202ENST00000370573 TMEM239Q8WW34 195 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 HAS2Q92819 552 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 SORCS2Q96PQ0 1159 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 DGCR6LQ9BY27 220 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 C8orf4Q9NR00 106 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 SDHAF3Q9NRP4 125 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 FAM118AQ9NWS6 357 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 SMPD3Q9NY59 655 aaPredicted RBP3.18□□□□□ -1.9
MCF2-202ENST00000370573 SELENONQ9NZV5 590 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 PEMTQ9UBM1 199 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 RPS6KB2Q9UBS0 482 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 TEKT2Q9UIF3 430 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 MGAT4BQ9UQ53 548 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 C15orf41Q9Y2V0 281 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 UBE2J1Q9Y385 318 aaPredicted RBP3.18□□□□□ -1.9
MCF2-202ENST00000370573 CSAG2Q9Y5P2 127 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 AP4B1Q9Y6B7 739 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 NCKAP5O14513 1909 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 MPDZO75970 2070 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 PIEZO2Q9H5I5 2752 aa3.18□□□□□ -1.9
MCF2-202ENST00000370573 TNRC6AQ8NDV7 1962 aaKnown RBP3.17□□□□□ -1.9
MCF2-202ENST00000370573 TMED7-TICAM2A0A0A6YYA0 188 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 hCG_1809904A0A1W2PP81 198 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 A0A1W2PPE2 198 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 A0A1W2PR64 198 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 MED19A0JLT2 244 aaPredicted RBP3.17□□□□□ -1.9
MCF2-202ENST00000370573 TMEM72A0PK05 275 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 OR5H15A6NDH6 313 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 A8MZ25 164 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 LRRN3E7EW58 273 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 H0YAE9 185 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 K7EM74 188 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 KPNA4O00629 521 aaPredicted RBP3.17□□□□□ -1.9
MCF2-202ENST00000370573 CDC42EP2O14613 210 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 DENRO43583 198 aaKnown RBP3.17□□□□□ -1.9
MCF2-202ENST00000370573 SLC25A12O75746 678 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 SNX4O95219 450 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 NUDT14O95848 222 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 ADAP00813 363 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 P04436 131 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 SP1P08047 785 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 TMEM225BP0DP42 221 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 IFI30P13284 250 aa3.17□□□□□ -1.9
MCF2-202ENST00000370573 EDN2P20800 178 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms